mh.all(Chr#).G contains the following information:

cDNA ID; extracted genome; chr;
ri|6430706D22|PX00048L02|2625 339634 Chr1

#aligned regions; #overlapping genscan exons; cDNA length;
total aligned region on cDNA side; total aligned region on genome side;
global identity; ignore this # now; #introns; locus start position; locus
end position; strand
3 3 2625 2622 2619 0.972216 0 2 389634 392481 +

identity; cDNA start/end; genome start/end; genscan start/end (-1:no
overlapping exon) ; ignore this # now; dn/ac concensus 0:cannot determine;
ignore this # now
0.98     1    71     389634    389705     389374    390267   2 GG  0  1
0.98    72   583     389756    390267     389374    390267   2 GT AG  1
0.97   584  2625     390444    392481     390731    390912   3  0 AG  1