Source Name	Comment [rna_tube]	Comment [sample_name]	Comment [organism]	Comment [barcode]	Protocol REF	Parameter [rna_extraction]	Extract Name	Comment [rna_id]	Comment [Material Type]	Comment [comment_on_rna]	Protocol REF	Comment [lsid]	Parameter [library_protocol]	Library Name	Comment [library_id]	Protocol REF	Parameter [sequence_protocol]	Parameter [machine_name]	Parameter [run_name]	Parameter [flowcell.channel]	File Name	Comment [sequence_raw_file]	Protocol REF	Parameter [sex]	File Name
10000-101A1	10000-101A1	Clontech Human Universal Reference Total RNA, pool1	Homo sapiens	CGTACG	standard whole cell	standard whole cell	10000-101A1.rna	10000-101A1.rna	total RNA	comment:Sample category:"FANTOM5 tissue"; company:"Clontech"; RNA lot number:"9052727A"; RNA Catalog number:"Cat:636538"; donor(cell lot):"10-20 pool";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:7.7; A260A280:1.74; A260A230:2.47	OP-SOLEXA-shortRNA-TruSeq-v2.0	1098	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10002	SRhi10002	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	bwa_aln	mixture	Clontech%20Human%20Universal%20Reference%20Total%20RNA%2c%20pool1.SRhi10002.10000-101A1.hg19.CGTACG.bam
10000-101A1	10000-101A1	Clontech Human Universal Reference Total RNA, pool1	Homo sapiens	CGATGT	standard whole cell	standard whole cell	10000-101A1.rna	10000-101A1.rna	total RNA	comment:Sample category:"FANTOM5 tissue"; company:"Clontech"; RNA lot number:"9052727A"; RNA Catalog number:"Cat:636538"; donor(cell lot):"10-20 pool";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:7.7; A260A280:1.74; A260A230:2.47	OP-SOLEXA-shortRNA-TruSeq-v2.0	1104	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10008	SRhi10008	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	bwa_aln	mixture	Clontech%20Human%20Universal%20Reference%20Total%20RNA%2c%20pool1.SRhi10008.10000-101A1.hg19.CGATGT.bam
10000-101A1	10000-101A1	Clontech Human Universal Reference Total RNA, pool1	Homo sapiens	GGCTAC	standard whole cell	standard whole cell	10000-101A1.rna	10000-101A1.rna	total RNA	comment:Sample category:"FANTOM5 tissue"; company:"Clontech"; RNA lot number:"9052727A"; RNA Catalog number:"Cat:636538"; donor(cell lot):"10-20 pool";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:7.7; A260A280:1.74; A260A230:2.47	OP-SOLEXA-shortRNA-TruSeq-v2.0	1108	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10012	SRhi10012	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	bwa_aln	mixture	Clontech%20Human%20Universal%20Reference%20Total%20RNA%2c%20pool1.SRhi10012.10000-101A1.hg19.GGCTAC.bam
10159-103A6	10159-103A6	spinal cord, adult, donor10252	Homo sapiens	GGCTAC	standard whole cell	standard whole cell	10159-103A6.rna	10159-103A6.rna	total RNA	comment:Sample category:"FANTOM5 update January1"; donor(cell lot):"donor: 10252";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:7.3; A260A280:2.04; A260A230:2.24	OP-SOLEXA-shortRNA-TruSeq-v2.0	1099	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10003	SRhi10003	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	bwa_aln	female	spinal%20cord%2c%20adult%2c%20donor10252.SRhi10003.10159-103A6.hg19.GGCTAC.bam
10160-103A7	10160-103A7	pineal gland, adult, donor10252	Homo sapiens	ACTTGA	standard whole cell	standard whole cell	10160-103A7.rna	10160-103A7.rna	total RNA	comment:Sample category:"FANTOM5 update January1"; donor(cell lot):"donor: 10252";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:6.8; A260A280:2.05; A260A230:2.21	OP-SOLEXA-shortRNA-TruSeq-v2.0	1102	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10006	SRhi10006	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	bwa_aln	female	pineal%20gland%2c%20adult%2c%20donor10252.SRhi10006.10160-103A7.hg19.ACTTGA.bam
10162-103A9	10162-103A9	pituitary gland, adult, donor10252	Homo sapiens	ACTTGA	standard whole cell	standard whole cell	10162-103A9.rna	10162-103A9.rna	total RNA	comment:Sample category:"FANTOM5 update January1"; donor(cell lot):"donor: 10252";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:6.9; A260A280:2.08; A260A230:2.23	OP-SOLEXA-shortRNA-TruSeq-v2.0	1103	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10007	SRhi10007	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	bwa_aln	female	pituitary%20gland%2c%20adult%2c%20donor10252.SRhi10007.10162-103A9.hg19.ACTTGA.bam