Source Name	Comment [rna_tube]	Comment [sample_name]	Comment [organism]	Comment [barcode]	Protocol REF	Parameter [rna_extraction]	Extract Name	Comment [rna_id]	Comment [Material Type]	Comment [comment_on_rna]	Protocol REF	Comment [lsid]	Parameter [library_protocol]	Library Name	Comment [library_id]	Protocol REF	Parameter [sequence_protocol]	Parameter [machine_name]	Parameter [run_name]	Parameter [flowcell.channel]	File Name	Comment [sequence_raw_file]	Protocol REF	Parameter [sex]	File Name
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1098	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10002	SRhi10002	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10002.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1099	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10003	SRhi10003	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10003.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1100	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10004	SRhi10004	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10004.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1101	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10005	SRhi10005	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10005.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1102	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10006	SRhi10006	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10006.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1103	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10007	SRhi10007	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10007.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1104	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10008	SRhi10008	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	/sequencedata/Hiseq2000/110802_SN549_0028_AC00HDABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10008.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1105	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10009	SRhi10009	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10009.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1106	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10010	SRhi10010	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10010.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1107	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10011	SRhi10011	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10011.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1108	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10012	SRhi10012	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10012.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1109	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10013	SRhi10013	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10013.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1110	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10014	SRhi10014	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10014.10005-101B1.mm9.ATCACG.bam
10005-101B1	10005-101B1	whole body, embryo E17.5, pool1 (internal control)	Mus musculus	ATCACG	standard whole cell	standard whole cell	10005-101B1.rna	10005-101B1.rna	total RNA	comment:Internal control RNA for FANTOM5; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.5; A260A280:2; A260A230:2.1	OP-SOLEXA-shortRNA-TruSeq-v2.0	1111	OP-SOLEXA-shortRNA-TruSeq-v2.0	SRhi10015	SRhi10015	OP-HiSeq2000-sequencing-cBot-v2.5	OP-HiSeq2000-sequencing-cBot-v2.5	NA	NA	NA	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	/sequencedata/Hiseq2000/110728_SN549_0027_BB06UJABXX/	bwa_aln	undefined_sex_type	whole%20body%2c%20embryo%20E17%2e5%2c%20pool1%20%28internal%20control%29.SRhi10015.10005-101B1.mm9.ATCACG.bam