Personal tools

MacroAPE 1083:CCGTCTYT,motif741

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CCGTCTYT,motif741,CNhs11764,T:1492.0(34.06%),B:18133.9(26.39%),P:1e-28

Motif matrix
POACGT
11.492936.976552.041.492
21.492950.404340.176199.928
31.4921.4921201.06287.956
41.4921.492214.8481274.168
537.31110.048135.772208.88
61.4921.4921.4921487.524
722.38540.104256.624672.892
81.4921.49274.61414.416

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

NDT80#MA0343.120.005445832.5922118CCGTCTTTTTGCGTTTTTGTGGCCGGAAA-
ARG80#MA0271.100.01079635.1390216CCGTCTTTGCGTCT-
Klf4#MA0039.100.01564677.4478118CCGTCTTTCCTTCCTTTA-
HMG-I/Y#MA0045.160.01965289.3547218CCGTCTTTGTTTTTCCATTTGTTG-