Personal tools

MacroAPE 1083:CTBGTCBTC,motif677

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CTBGTCBTC,motif677,CNhs11985,T:592.0(23.70%),B:11219.9(15.04%),P:1e-29

Motif matrix
POACGT
10.592590.2240.5920.592
2203.0560.5920.592387.76
379.92195.952155.696160.432
40.592132.608458.2080.592
50.5920.5920.592590.224
6194.768300.7360.59295.904
766.304214.896149.184162.208
80.59227.824175.232388.352
952.096313.76117.808108.336

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

HMG-1#MA0044.100.0003562510.1695750.3391519CTCGTCCTCGTTGTACTC+
HIF1A::ARNT#MA0259.110.0090224.2944717CTCGTCCTCGCACGTCC-
Tal1::Gata1#MA0140.150.0158417.5403319CTCGTCCTCCTTATCTGTCCCCACCAG-
SWI5#MA0402.120.0198279.4376416CTCGTCCTCTGCTGGTT+