UBERON:0004871: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:05, 26 June 2012
| Name: | somatic layer of lateral plate mesoderm | ||
|---|---|---|---|
| Definition: | "Layer of lateral plate mesoderm that forms the future body wall - underlies the ectoderm[WP]." [Wikipedia:Lateral_plate_mesoderm#Division_into_layers] | ||
| Xrefs: |
| ||
| Synonyms: |
"outer layer of lateral plate mesoderm" EXACT [] "parietal mesoderm" RELATED [ISBN:9780878932504] "somatic mesoderm" RELATED [BILA:0000047] | ||
| Comments: | check BILA |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|
Children
| develops from: | UBERON:0005891 (coelomic epithelium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004871 (somatic layer of lateral plate mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.46e-68 | FFCP PHASE1:Hg19::chr2:191897854..191897865,-#_5e747267538034f87597b0634ee1b270 | p@chr2:191897854..191897865, - |
| 2.46e-68 | FFCP PHASE1:Hg19::chr19:36592910..36592917,+#_5e747267538034f87597b0634ee1b270 | p@chr19:36592910..36592917, + |
| 2.46e-68 | FFCP PHASE1:Hg19::chr3:123512689..123512717,-#_5e747267538034f87597b0634ee1b270 | p36@MYLK |
| 2.46e-68 | FFCP PHASE2:Hg19::chr2:191897854..191897865,-#_5e747267538034f87597b0634ee1b270 | p@chr2:191897854..191897865, - |
| 2.46e-68 | FFCP PHASE2:Hg19::chr19:36592910..36592917,+#_5e747267538034f87597b0634ee1b270 | p@chr19:36592910..36592917, + |
| 2.46e-68 | FFCP PHASE2:Hg19::chr3:123512689..123512717,-#_5e747267538034f87597b0634ee1b270 | p36@MYLK |
| 6.53e-68 | FFCP PHASE2:Hg19::chr2:25862154..25862172,-#_e0567cbfd10dadcd0d2da038c37ddb0e | p14@DTNB |
| 6.53e-68 | FFCP PHASE1:Hg19::chr2:25862154..25862172,-#_e0567cbfd10dadcd0d2da038c37ddb0e | p14@DTNB |
| 5.12e-66 | FFCP PHASE2:Hg19::chr12:8975061..8975072,+#_7183b2d6c409579b7e43e53586c89c67 | p5@A2ML1 |
| 5.12e-66 | FFCP PHASE1:Hg19::chr12:8975061..8975072,+#_7183b2d6c409579b7e43e53586c89c67 | p5@A2ML1 |
| 7.15e-66 | FFCP PHASE1:Hg19::chr2:161057428..161057450,-#_9a4acccf5f9d8b8b91b42da1f8935d18 | p@chr2:161057428..161057450, - |
| 7.15e-66 | FFCP PHASE2:Hg19::chr2:161057428..161057450,-#_9a4acccf5f9d8b8b91b42da1f8935d18 | p@chr2:161057428..161057450, - |
| 8.25e-62 | FFCP PHASE2:Hg19::chr18:6286777..6286797,+#_b9757c2bf38f830be1625477dd4f613d | p@chr18:6286777..6286797, + |
| 8.25e-62 | FFCP PHASE1:Hg19::chr18:6286777..6286797,+#_b9757c2bf38f830be1625477dd4f613d | p@chr18:6286777..6286797, + |
| 1.99e-61 | FFCP PHASE2:Hg19::chr19:36592982..36592993,+#_38f1cd0462cbc84eef4d032990734dfe | p@chr19:36592982..36592993, + |
| 1.99e-61 | FFCP PHASE1:Hg19::chr19:36592982..36592993,+#_38f1cd0462cbc84eef4d032990734dfe | p@chr19:36592982..36592993, + |
| 9.15e-57 | FFCP PHASE1:Hg19::chrX:48374277..48374289,+#_3fd0ea652a5d4ed065990b995998c638 | p@chrX:48374277..48374289, + |
| 9.15e-57 | FFCP PHASE2:Hg19::chrX:48374277..48374289,+#_3fd0ea652a5d4ed065990b995998c638 | p@chrX:48374277..48374289, + |
| 1.06e-56 | FFCP PHASE1:Hg19::chr10:131344593..131344605,+#_cbefc28bedd84673ee6e1931a2daf702 | p@chr10:131344593..131344605, + |
| 1.06e-56 | FFCP PHASE2:Hg19::chr10:131344593..131344605,+#_cbefc28bedd84673ee6e1931a2daf702 | p@chr10:131344593..131344605, + |
| 2.02e-56 | FFCP PHASE1:Hg19::chr6:12161831..12161855,+#_b406ee86a37282c419ba34bbfdd043a6 | p@chr6:12161831..12161855, + |
| 2.02e-56 | FFCP PHASE2:Hg19::chr6:12161831..12161855,+#_b406ee86a37282c419ba34bbfdd043a6 | p@chr6:12161831..12161855, + |
| 2.85e-56 | FFCP PHASE2:Hg19::chr2:62257232..62257274,+#_b57382cf78d78602afcbc3efce60c82a | p@chr2:62257232..62257274, + |
| 2.85e-56 | FFCP PHASE1:Hg19::chr2:62257232..62257274,+#_b57382cf78d78602afcbc3efce60c82a | p@chr2:62257232..62257274, + |
| 3.32e-56 | FFCP PHASE2:Hg19::chr14:104202639..104202646,-#_661d256d486c13a8de2a61a6641a22b5 | p@chr14:104202639..104202646, - |
| 3.32e-56 | FFCP PHASE1:Hg19::chr14:104202639..104202646,-#_661d256d486c13a8de2a61a6641a22b5 | p@chr14:104202639..104202646, - |
| 6.66e-56 | FFCP PHASE1:Hg19::chr7:114542043..114542046,-#_36b45dafb99769545e6be214a5342c3f | p@chr7:114542043..114542046, - |
| 6.66e-56 | FFCP PHASE2:Hg19::chr7:114542043..114542046,-#_36b45dafb99769545e6be214a5342c3f | p@chr7:114542043..114542046, - |
| 1.65e-52 | FFCP PHASE1:Mm9::chr12:32131871..32131874,+#_9f7951276d30c2d90d5368e6f0590343 | p2@Slc26a3 |
| 1.65e-52 | FFCP PHASE2:Mm9::chr12:32131871..32131874,+#_9f7951276d30c2d90d5368e6f0590343 | p2@Slc26a3 |
| 2.22e-52 | FFCP PHASE1:Hg19::chr19:36592925..36592948,+#_e46f0717789a2ebf2cb3d8aa0c806811 | p@chr19:36592925..36592948, + |
| 2.22e-52 | FFCP PHASE2:Hg19::chr19:36592925..36592948,+#_e46f0717789a2ebf2cb3d8aa0c806811 | p@chr19:36592925..36592948, + |
| 2.22e-51 | FFCP PHASE1:Hg19::chr2:237683156..237683171,+#_41f916c09eb4f8854574b3ddbcfe210e | p@chr2:237683156..237683171, + |
| 2.22e-51 | FFCP PHASE2:Hg19::chr2:237683156..237683171,+#_41f916c09eb4f8854574b3ddbcfe210e | p@chr2:237683156..237683171, + |
| 2.46e-51 | FFCP PHASE1:Hg19::chr13:114542805..114542816,-#_e7f461ea0ab2998e257e4c67b5306124 | p@chr13:114542805..114542816, - |
| 2.46e-51 | FFCP PHASE2:Hg19::chr13:114542805..114542816,-#_e7f461ea0ab2998e257e4c67b5306124 | p@chr13:114542805..114542816, - |
| 3.36e-51 | FFCP PHASE2:Hg19::chr5:153858071..153858085,+#_25f737cb985d69be082ef3edfb550963 | p@chr5:153858071..153858085, + |
| 3.36e-51 | FFCP PHASE1:Hg19::chr5:153858071..153858085,+#_25f737cb985d69be082ef3edfb550963 | p@chr5:153858071..153858085, + |
| 3.73e-51 | FFCP PHASE1:Hg19::chr5:153855212..153855222,-#_6004e2368ece72f29f1685afa23ab098 | p@chr5:153855212..153855222, - |
| 3.73e-51 | FFCP PHASE2:Hg19::chr5:153855212..153855222,-#_6004e2368ece72f29f1685afa23ab098 | p@chr5:153855212..153855222, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:38859399..38859408,-#_4ec93f65c606602e2302c8ac4acf09e8 | p@chr17:38859399..38859408, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr16:84889089..84889095,-#_4ec93f65c606602e2302c8ac4acf09e8 | p@chr16:84889089..84889095, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr16:84889089..84889095,-#_4ec93f65c606602e2302c8ac4acf09e8 | p@chr16:84889089..84889095, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr7:7310907..7310916,+#_4ec93f65c606602e2302c8ac4acf09e8 | p4@ENST00000447039 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:59573885..59573903,-#_4ec93f65c606602e2302c8ac4acf09e8 | p@chr5:59573885..59573903, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:38859653..38859658,-#_4ec93f65c606602e2302c8ac4acf09e8 | p10@KRT24 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:38858136..38858142,-#_4ec93f65c606602e2302c8ac4acf09e8 | p@chr17:38858136..38858142, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:59573885..59573903,-#_4ec93f65c606602e2302c8ac4acf09e8 | p@chr5:59573885..59573903, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr7:7310907..7310916,+#_4ec93f65c606602e2302c8ac4acf09e8 | p4@ENST00000447039 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:38859653..38859658,-#_4ec93f65c606602e2302c8ac4acf09e8 | p10@KRT24 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:38859399..38859408,-#_4ec93f65c606602e2302c8ac4acf09e8 | p@chr17:38859399..38859408, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chrX:21444376..21444380,+#_4ec93f65c606602e2302c8ac4acf09e8 | p@chrX:21444376..21444380, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:38858136..38858142,-#_4ec93f65c606602e2302c8ac4acf09e8 | p@chr17:38858136..38858142, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chrX:21444376..21444380,+#_4ec93f65c606602e2302c8ac4acf09e8 | p@chrX:21444376..21444380, + |
| 1.17e-49 | FFCP PHASE1:Hg19::chr11:5626359..5626406,+#_cb7136a82570c4ec37449d4df6c4f6f2 | p8@TRIM6 |
| 1.17e-49 | FFCP PHASE2:Hg19::chr11:5626359..5626406,+#_cb7136a82570c4ec37449d4df6c4f6f2 | p8@TRIM6 |
| 1.5e-49 | FFCP PHASE2:Hg19::chr3:123512832..123512846,-#_1a79a4ca881d9ea01df2ef890b014404 | p46@MYLK |
| 1.5e-49 | FFCP PHASE1:Hg19::chr3:123512832..123512846,-#_1a79a4ca881d9ea01df2ef890b014404 | p46@MYLK |
| 4.41e-48 | FFCP PHASE2:Hg19::chr15:68344995..68345013,+#_6be8f08235d27188a12d685174ab480d | p@chr15:68344995..68345013, + |
| 4.41e-48 | FFCP PHASE1:Hg19::chr15:68344995..68345013,+#_6be8f08235d27188a12d685174ab480d | p@chr15:68344995..68345013, + |
| 1.06e-47 | FFCP PHASE1:Hg19::chr11:1946293..1946319,+#_910bb5502b900ec44581c57e74027bc0 | p11@TNNT3 |
| 1.06e-47 | FFCP PHASE2:Hg19::chr21:39670125..39670140,+#_910bb5502b900ec44581c57e74027bc0 | p@chr21:39670125..39670140, + |
| 1.06e-47 | FFCP PHASE2:Hg19::chr11:1946293..1946319,+#_910bb5502b900ec44581c57e74027bc0 | p11@TNNT3 |
| 1.06e-47 | FFCP PHASE1:Hg19::chr21:39670125..39670140,+#_910bb5502b900ec44581c57e74027bc0 | p@chr21:39670125..39670140, + |
| 1.28e-47 | FFCP PHASE2:Hg19::chr11:122288906..122288919,-#_b73577633506a6a87094249b7d4d5a15 | p@chr11:122288906..122288919, - |
| 1.28e-47 | FFCP PHASE2:Hg19::chr3:55384975..55384986,-#_b73577633506a6a87094249b7d4d5a15 | p1@ENST00000469806 |
| 1.28e-47 | FFCP PHASE1:Hg19::chr3:55384975..55384986,-#_b73577633506a6a87094249b7d4d5a15 | p1@ENST00000469806 |
| 1.28e-47 | FFCP PHASE1:Hg19::chr11:122288906..122288919,-#_b73577633506a6a87094249b7d4d5a15 | p@chr11:122288906..122288919, - |
| 3.73e-45 | FFCP PHASE1:Hg19::chr6:31084453..31084463,-#_9d9085dc71d427966844c3e0be7d668b | p@chr6:31084453..31084463, - |
| 3.73e-45 | FFCP PHASE2:Hg19::chr6:31084453..31084463,-#_9d9085dc71d427966844c3e0be7d668b | p@chr6:31084453..31084463, - |
| 4.34e-45 | FFCP PHASE2:Hg19::chr19:36594000..36594048,+#_0253e124e4642509b31f3c766a02b425 | p1@BC128417 |
| 4.34e-45 | FFCP PHASE1:Hg19::chr19:36594000..36594048,+#_0253e124e4642509b31f3c766a02b425 | p1@BC128417 |
| 1.37e-44 | FFCP PHASE2:Hg19::chr13:43636294..43636306,+#_7857332f70b978db7d0fbed3a1e17765 | p@chr13:43636294..43636306, + |
| 1.37e-44 | FFCP PHASE1:Hg19::chr13:43636294..43636306,+#_7857332f70b978db7d0fbed3a1e17765 | p@chr13:43636294..43636306, + |
| 1.45e-44 | FFCP PHASE1:Hg19::chr6:12161805..12161817,+#_3a00b531baaccb0bc1faa4f823bb9e45 | p@chr6:12161805..12161817, + |
| 1.45e-44 | FFCP PHASE2:Hg19::chr6:12161805..12161817,+#_3a00b531baaccb0bc1faa4f823bb9e45 | p@chr6:12161805..12161817, + |
| 1.97e-44 | FFCP PHASE1:Hg19::chr11:8857248..8857269,-#_7703be2237d1dd7c9e4a226524890f2c | p16@ST5 |
| 1.97e-44 | FFCP PHASE2:Hg19::chr11:8857248..8857269,-#_7703be2237d1dd7c9e4a226524890f2c | p16@ST5 |
| 2.03e-44 | FFCP PHASE1:Hg19::chr10:134227398..134227410,+#_d369739cabbd357a140253076f2e34e6 | p@chr10:134227398..134227410, + |
| 2.03e-44 | FFCP PHASE2:Hg19::chr10:134227398..134227410,+#_d369739cabbd357a140253076f2e34e6 | p@chr10:134227398..134227410, + |
| 2.82e-44 | FFCP PHASE2:Hg19::chr11:8857295..8857310,-#_cb890e27f48d7229fad0fdf8a2a091f7 | p21@ST5 |
| 2.82e-44 | FFCP PHASE2:Hg19::chr15:72462536..72462552,-#_cb890e27f48d7229fad0fdf8a2a091f7 | p@chr15:72462536..72462552, - |
| 2.82e-44 | FFCP PHASE1:Hg19::chr11:8857295..8857310,-#_cb890e27f48d7229fad0fdf8a2a091f7 | p21@ST5 |
| 2.82e-44 | FFCP PHASE1:Hg19::chr15:72462536..72462552,-#_cb890e27f48d7229fad0fdf8a2a091f7 | p@chr15:72462536..72462552, - |
| 3.37e-44 | FFCP PHASE2:Hg19::chr2:237682990..237683009,+#_3d39777bf3a09e6caddcc869ee2a1dc2 | p@chr2:237682990..237683009, + |
| 3.37e-44 | FFCP PHASE1:Hg19::chr2:237682954..237682971,+#_3d39777bf3a09e6caddcc869ee2a1dc2 | p@chr2:237682954..237682971, + |
| 3.37e-44 | FFCP PHASE1:Hg19::chr2:237682990..237683009,+#_3d39777bf3a09e6caddcc869ee2a1dc2 | p@chr2:237682990..237683009, + |
| 3.37e-44 | FFCP PHASE2:Hg19::chr2:237682954..237682971,+#_3d39777bf3a09e6caddcc869ee2a1dc2 | p@chr2:237682954..237682971, + |
| 3.97e-44 | FFCP PHASE1:Hg19::chr9:135932181..135932191,+#_287403d69ca9830df636944870f4170a | p@chr9:135932181..135932191, + |
| 3.97e-44 | FFCP PHASE2:Hg19::chr9:135932181..135932191,+#_287403d69ca9830df636944870f4170a | p@chr9:135932181..135932191, + |
| 8.65e-44 | FFCP PHASE1:Hg19::chr2:237682972..237682977,+#_3deb10b935b3d9272b94d14edcd6663a | p@chr2:237682972..237682977, + |
| 8.65e-44 | FFCP PHASE2:Hg19::chr2:237682972..237682977,+#_3deb10b935b3d9272b94d14edcd6663a | p@chr2:237682972..237682977, + |
| 1.24e-41 | FFCP PHASE2:Hg19::chr11:8857215..8857232,-#_a23a5b1ed3c705bb4a7080df9d139efa | p17@ST5 |
| 1.24e-41 | FFCP PHASE1:Hg19::chr11:8857215..8857232,-#_a23a5b1ed3c705bb4a7080df9d139efa | p17@ST5 |
| 2.86e-41 | FFCP PHASE1:Hg19::chr9:92058365..92058396,-#_e088ce12a690c9d16bc26a9397c92d18 | p@chr9:92058365..92058396, - |
| 2.86e-41 | FFCP PHASE2:Hg19::chr9:92058365..92058396,-#_e088ce12a690c9d16bc26a9397c92d18 | p@chr9:92058365..92058396, - |
| 7.86e-40 | FFCP PHASE1:Hg19::chr2:237683038..237683048,+#_5a29ec3023dc95d43f741fc6744c8855 | p@chr2:237683038..237683048, + |
| 7.86e-40 | FFCP PHASE2:Hg19::chr19:36592959..36592975,+#_5a29ec3023dc95d43f741fc6744c8855 | p@chr19:36592959..36592975, + |
| 7.86e-40 | FFCP PHASE2:Hg19::chr2:237683038..237683048,+#_5a29ec3023dc95d43f741fc6744c8855 | p@chr2:237683038..237683048, + |
| 7.86e-40 | FFCP PHASE1:Hg19::chr19:36592959..36592975,+#_5a29ec3023dc95d43f741fc6744c8855 | p@chr19:36592959..36592975, + |
