FF:10513-107D9: Difference between revisions

Revision as of 13:37, 29 June 2012

Name:	colon carcinoma cell line:CACO-2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	colon
dev stage	NA
sex	male
age	72
cell type	unclassifiable
cell line	CACO-2
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.577
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0.0574
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.299
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0462
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0173
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.168
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.211
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.154
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0.837
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0.329
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.354
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.00733
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0.0574
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.537
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.167
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11280

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00695
MA0003.1	MA0003.1	0.508
MA0004.1	MA0004.1	0.0137
MA0006.1	MA0006.1	0.459
MA0007.1	MA0007.1	0.956
MA0009.1	MA0009.1	0.221
MA0014.1	MA0014.1	0.00681
MA0017.1	MA0017.1	2.56641e-12
MA0018.2	MA0018.2	0.89
MA0019.1	MA0019.1	0.639
MA0024.1	MA0024.1	1.6392e-7
MA0025.1	MA0025.1	0.711
MA0027.1	MA0027.1	0.98
MA0028.1	MA0028.1	0.00833
MA0029.1	MA0029.1	2.9972e-4
MA0030.1	MA0030.1	0.18
MA0031.1	MA0031.1	0.0299
MA0035.2	MA0035.2	9.01544e-7
MA0038.1	MA0038.1	3.44608e-5
MA0039.2	MA0039.2	8.54906e-4
MA0040.1	MA0040.1	0.188
MA0041.1	MA0041.1	0.21
MA0042.1	MA0042.1	0.282
MA0043.1	MA0043.1	0.552
MA0046.1	MA0046.1	5.03016e-61
MA0047.2	MA0047.2	0.00139
MA0048.1	MA0048.1	0.993
MA0050.1	MA0050.1	9.20479e-8
MA0051.1	MA0051.1	0.0134
MA0052.1	MA0052.1	0.0545
MA0055.1	MA0055.1	0.00278
MA0057.1	MA0057.1	0.708
MA0058.1	MA0058.1	0.00286
MA0059.1	MA0059.1	0.0817
MA0060.1	MA0060.1	1.92436e-18
MA0061.1	MA0061.1	6.9769e-5
MA0062.2	MA0062.2	0.0321
MA0065.2	MA0065.2	5.28678e-4
MA0066.1	MA0066.1	0.184
MA0067.1	MA0067.1	0.128
MA0068.1	MA0068.1	0.205
MA0069.1	MA0069.1	0.971
MA0070.1	MA0070.1	0.788
MA0071.1	MA0071.1	0.921
MA0072.1	MA0072.1	0.0329
MA0073.1	MA0073.1	0.6
MA0074.1	MA0074.1	0.79
MA0076.1	MA0076.1	0.0291
MA0077.1	MA0077.1	0.315
MA0078.1	MA0078.1	0.207
MA0079.2	MA0079.2	0.626
MA0080.2	MA0080.2	1.11366e-9
MA0081.1	MA0081.1	0.051
MA0083.1	MA0083.1	0.955
MA0084.1	MA0084.1	0.808
MA0087.1	MA0087.1	0.638
MA0088.1	MA0088.1	0.257
MA0090.1	MA0090.1	0.00341
MA0091.1	MA0091.1	0.0475
MA0092.1	MA0092.1	0.334
MA0093.1	MA0093.1	0.01
MA0099.2	MA0099.2	1.25571e-4
MA0100.1	MA0100.1	0.163
MA0101.1	MA0101.1	0.0183
MA0102.2	MA0102.2	0.725
MA0103.1	MA0103.1	1.15208e-6
MA0104.2	MA0104.2	0.00571
MA0105.1	MA0105.1	2.08005e-4
MA0106.1	MA0106.1	0.295
MA0107.1	MA0107.1	0.00129
MA0108.2	MA0108.2	0.31
MA0111.1	MA0111.1	0.979
MA0112.2	MA0112.2	0.0798
MA0113.1	MA0113.1	0.387
MA0114.1	MA0114.1	3.34743e-17
MA0115.1	MA0115.1	8.46311e-5
MA0116.1	MA0116.1	0.0035
MA0117.1	MA0117.1	0.923
MA0119.1	MA0119.1	0.00115
MA0122.1	MA0122.1	0.978
MA0124.1	MA0124.1	0.467
MA0125.1	MA0125.1	0.0105
MA0131.1	MA0131.1	0.406
MA0135.1	MA0135.1	0.584
MA0136.1	MA0136.1	1.83072e-6
MA0137.2	MA0137.2	0.139
MA0138.2	MA0138.2	0.234
MA0139.1	MA0139.1	0.206
MA0140.1	MA0140.1	1.17482e-5
MA0141.1	MA0141.1	0.622
MA0142.1	MA0142.1	0.106
MA0143.1	MA0143.1	0.381
MA0144.1	MA0144.1	0.124
MA0145.1	MA0145.1	0.201
MA0146.1	MA0146.1	0.902
MA0147.1	MA0147.1	0.0165
MA0148.1	MA0148.1	8.4449e-4
MA0149.1	MA0149.1	0.0987
MA0150.1	MA0150.1	0.0116
MA0152.1	MA0152.1	0.865
MA0153.1	MA0153.1	9.93332e-48
MA0154.1	MA0154.1	0.00537
MA0155.1	MA0155.1	0.414
MA0156.1	MA0156.1	7.36852e-4
MA0157.1	MA0157.1	0.132
MA0159.1	MA0159.1	0.784
MA0160.1	MA0160.1	0.446
MA0162.1	MA0162.1	0.578
MA0163.1	MA0163.1	0.319
MA0164.1	MA0164.1	0.0596
MA0258.1	MA0258.1	0.195
MA0259.1	MA0259.1	0.345

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11280

Novel motif	Logo	P-value
1	1	0.667
10	10	0.533
100	100	0.278
101	101	0.635
102	102	0.372
103	103	0.892
104	104	0.629
105	105	0.777
106	106	0.0788
107	107	0.498
108	108	0.636
109	109	0.453
11	11	0.42
110	110	0.402
111	111	0.881
112	112	0.102
113	113	0.54
114	114	0.289
115	115	0.583
116	116	0.327
117	117	0.81
118	118	0.478
119	119	0.916
12	12	0.978
120	120	0.796
121	121	0.392
122	122	0.121
123	123	0.41
124	124	0.287
125	125	0.31
126	126	0.55
127	127	0.413
128	128	0.0522
129	129	0.979
13	13	0.00503
130	130	0.0705
131	131	0.165
132	132	0.613
133	133	0.0428
134	134	0.455
135	135	0.204
136	136	0.00648
137	137	0.0964
138	138	0.0331
139	139	0.0302
14	14	0.408
140	140	0.741
141	141	0.847
142	142	0.723
143	143	0.0983
144	144	0.409
145	145	0.508
146	146	0.798
147	147	0.512
148	148	0.405
149	149	0.641
15	15	0.729
150	150	0.494
151	151	0.208
152	152	0.375
153	153	0.594
154	154	0.0989
155	155	0.349
156	156	0.616
157	157	0.336
158	158	0.363
159	159	0.693
16	16	0.724
160	160	0.328
161	161	0.807
162	162	0.956
163	163	0.201
164	164	0.303
165	165	0.818
166	166	0.0431
167	167	0.812
168	168	0.24
169	169	0.488
17	17	0.791
18	18	0.0277
19	19	0.149
2	2	0.241
20	20	0.418
21	21	0.225
22	22	0.604
23	23	0.0224
24	24	0.622
25	25	0.886
26	26	0.992
27	27	0.337
28	28	0.876
29	29	0.702
3	3	0.427
30	30	0.654
31	31	0.712
32	32	0.0128
33	33	0.637
34	34	0.513
35	35	0.391
36	36	0.318
37	37	0.421
38	38	0.815
39	39	0.399
4	4	0.551
40	40	0.0343
41	41	0.0492
42	42	0.868
43	43	0.21
44	44	0.596
45	45	0.525
46	46	0.307
47	47	0.542
48	48	0.743
49	49	0.337
5	5	0.623
50	50	0.359
51	51	0.814
52	52	0.932
53	53	0.45
54	54	0.754
55	55	0.566
56	56	0.657
57	57	0.931
58	58	0.637
59	59	0.0616
6	6	0.84
60	60	0.373
61	61	0.319
62	62	0.25
63	63	0.553
64	64	0.667
65	65	0.0645
66	66	2.9958e-4
67	67	0.119
68	68	0.201
69	69	0.387
7	7	0.157
70	70	0.0944
71	71	0.494
72	72	0.578
73	73	0.604
74	74	0.166
75	75	0.692
76	76	0.947
77	77	0.214
78	78	0.00764
79	79	0.111
8	8	0.772
80	80	0.22
81	81	0.391
82	82	0.00826
83	83	0.651
84	84	0.483
85	85	0.0917
86	86	0.66
87	87	0.0819
88	88	0.991
89	89	0.0303
9	9	0.0469
90	90	0.778
91	91	0.00516
92	92	0.076
93	93	0.856
94	94	0.025
95	95	0.317
96	96	0.246
97	97	0.924
98	98	0.703
99	99	0.799

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11280

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100195 CACO-2 cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002321 (embryonic cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0002563 (intestinal epithelial cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002251 (epithelial cell of alimentary canal)
0002253 (epithelial cell of large intestine)
0000223 (endodermal cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)
299 (adenocarcinoma)
3119 (gastrointestinal system cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001155 (colon)
0001052 (rectum)
0000160 (intestine)
0000483 (epithelium)
0001242 (intestinal mucosa)
0000926 (mesoderm)
0000479 (tissue)
0001007 (digestive system)
0000344 (mucosa)
0000064 (organ part)
0000077 (mixed endoderm/mesoderm-derived structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0004119 (endoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005911 (endo-epithelium)
0004923 (organ component layer)
0004921 (subdivision of digestive tract)
0005423 (developing anatomical structure)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0000060 (anatomical wall)
0001062 (anatomical entity)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0005291 (embryonic tissue)
0001262 (wall of intestine)
0004786 (gastrointestinal system mucosa)
0000485 (simple columnar epithelium)
0003350 (epithelium of mucosa)
0003929 (gut epithelium)
0004808 (gastrointestinal system epithelium)
0001277 (intestinal epithelium)
0003104 (mesenchyme)
0000925 (endoderm)
0006598 (presumptive structure)
0004185 (endodermal part of digestive tract)
0002532 (epiblast (generic))
0001555 (digestive tract)
0000059 (large intestine)
0005409 (gastrointestinal system)
0007026 (primitive gut)
0004907 (lower digestive tract)
0009142 (entire embryonic mesenchyme)
0001046 (hindgut)
0006595 (presumptive endoderm)
0006603 (presumptive mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!2.45!277.76!SEBOX;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!2.11!127.22!SEBOX;;chr6:1312325..1312340,+!p1@FOXQ1!2.10!197.33!FOXQ1;;chr20:42984330..42984364,+!p2@HNF4A!2.00!99.80!HNF4A;;chr1:201979743..201979762,+!p1@ELF3!1.75!54.84!ELF3;;chr14:38064429..38064486,-!p1@FOXA1!1.72!52.02!FOXA1;;chr18:19749541..19749557,+!p1@GATA6!1.71!153.37!GATA6;;chr15:96869511..96869525,+!p16@NR2F2!1.58!41.28!NR2F2;;chr5:134369905..134369972,-!p1@PITX1!1.54!50.60!PITX1;;chr20:31350184..31350200,+!p1@DNMT3B!1.53!67.00!DNMT3B;;chr8:102504651..102504683,+!p1@GRHL2!1.51!31.38!GRHL2;;chrX:131547625..131547644,-!p4@MBNL3!1.51!31.38!MBNL3;;chr2:171571827..171571853,+!p1@SP5!1.48!29.40!SP5;;chr11:61520075..61520136,+!p1@C11orf9!1.47!58.52!C11orf9;;chr5:134369879..134369898,-!p2@PITX1!1.47!28.84!PITX1;;chr6:126221034..126221056,+!p13@NCOA7!1.43!25.87!NCOA7;;chr1:164528687..164528711,+!p6@PBX1!1.39!27.42!PBX1;;chr20:22564895..22564910,-!p1@FOXA2!1.39!23.75!FOXA2;;chr13:28543285..28543314,-!p2@CDX2!1.39!23.61!CDX2;;chr1:42801540..42801562,-!p4@FOXJ3!1.37!22.48!FOXJ3;;chr2:16080659..16080685,+!p1@MYCN!1.35!21.20!MYCN;;chr17:26697257..26697268,-!p3@SEBOX,p3@VTN!1.33!20.50!SEBOX;;chr5:2751762..2751784,-!p1@IRX2!1.33!20.35!IRX2;;chr1:201979703..201979721,+!p2@ELF3!1.31!19.65!ELF3;;chr11:120107344..120107351,+!p1@POU2F3!1.29!22.48!POU2F3;;chr4:111558135..111558198,-!p2@PITX2!1.29!18.66!PITX2;;chr16:85932760..85932775,+!p1@IRF8!1.28!18.09!IRF8;;chr20:55204351..55204377,+!p1@TFAP2C!1.22!19.79!TFAP2C;;chr17:45928521..45928539,-!p1@SP6!1.21!15.27!SP6;;chr1:209979467..209979494,-!p1@IRF6!1.19!16.40!IRF6;;chr20:43029862..43029900,+!p1@HNF4A!1.19!14.42!HNF4A;;chr17:36105042..36105060,-!p1@HNF1B!1.19!14.42!HNF1B;;chr20:42295745..42295765,+!p1@MYBL2!1.15!211.32!MYBL2;;chr2:171572786..171572840,+!p2@SP5!1.15!13.29!SP5;;chr6:126240442..126240459,+!p4@NCOA7!1.14!16.40!NCOA7;;chr2:171571931..171571959,+!p3@SP5!1.14!12.72!SP5;;chr5:174151612..174151633,+!p2@MSX2!1.13!12.58!MSX2;;chr3:71355163..71355209,-!p5@FOXP1!1.11!16.54!FOXP1;;chr1:247171316..247171336,-!p3@ZNF695!1.10!17.25!ZNF695;;chr18:19749386..19749404,+!p2@GATA6!1.10!16.68!GATA6;;chr10:8095593..8095625,+!p3@GATA3!1.10!13.71!GATA3;;chr5:174151553..174151610,+!p1@MSX2!1.09!18.94!MSX2;;chr13:28543431..28543487,-!p1@CDX2!1.08!11.03!CDX2;;chr14:38064590..38064606,-!p2@FOXA1!1.08!11.03!FOXA1;;chr11:19263160..19263176,-!p1@E2F8!1.07!12.58!E2F8;;chr8:102504690..102504704,+!p3@GRHL2!1.07!10.74!GRHL2;;chr9:138591319..138591340,-!p1@SOHLH1!1.06!10.60!SOHLH1;;chr20:42295713..42295738,+!p2@MYBL2!1.05!61.63!MYBL2;;chr3:181429704..181429722,+!p1@SOX2!1.03!9.75!SOX2;;chr13:28543388..28543406,-!p3@CDX2!1.03!9.75!CDX2;;chr13:73633131..73633149,+!p1@KLF5!1.01!101.49!KLF5;;chr17:48045917..48045977,+!p1@DLX4!1.01!9.19!DLX4;;chr6:126240380..126240430,+!p2@NCOA7!0.99!23.46!NCOA7;;chr20:50159198..50159299,-!p1@NFATC2!0.99!13.00!NFATC2;;chr7:156803329..156803362,-!p1@MNX1!0.99!8.76!MNX1;;chr17:53342311..53342400,+!p1@HLF!0.96!9.47!HLF;;chr7:27135591..27135658,-!p1@HOXA1!0.95!15.55!HOXA1;;chr11:65554528..65554546,+!p1@OVOL1!0.94!7.77!OVOL1;;chr22:22874610..22874616,-!p1@ZNF280A!0.94!7.63!ZNF280A;;chr2:122042770..122042785,-!p1@TFCP2L1!0.91!7.21!TFCP2L1;;chr3:181429741..181429767,+!p2@SOX2!0.91!7.21!SOX2;;chr10:60145155..60145206,+!p1@TFAM!0.90!315.78!TFAM;;chr12:52445218..52445237,+!p1@NR4A1!0.89!89.76!NR4A1;;chr19:33793430..33793447,-!p1@CEBPA!0.89!30.11!CEBPA;;chr10:97889464..97889494,+!p3@ZNF518A!0.89!13.00!ZNF518A;;chr17:46687959..46688007,-!p2@HOXB7!0.89!9.61!HOXB7;;chr19:46367576..46367592,+!p1@FOXA3!0.89!6.78!FOXA3;;chr10:63661437..63661465,+!p2@ARID5B!0.88!133.30!ARID5B;;chr11:16419037..16419064,-!p3@SOX6!0.88!6.64!SOX6;;chr7:27196267..27196311,-!p1@HOXA7!0.88!6.64!HOXA7;;chr18:19749517..19749531,+!p3@GATA6!0.87!11.87!GATA6;;chr2:25475120..25475176,-!p2@DNMT3A!0.87!8.91!DNMT3A;;chr7:115608357..115608372,-!p3@TFEC!0.87!6.36!TFEC;;chr11:65554563..65554576,+!p2@OVOL1!0.87!6.36!OVOL1;;chr20:50418128..50418147,-!p2@SALL4!0.86!6.22!SALL4;;chr3:193853927..193853944,+!p1@HES1!0.85!209.77!HES1;;chr19:58326246..58326262,-!p2@ZNF552!0.85!14.98!ZNF552;;chr13:28543316..28543329,-!p4@CDX2!0.85!6.08!CDX2;;chr2:63277948..63277974,+!p1@OTX1!0.83!5.80!OTX1;;chr17:41622765..41622821,-!p2@ETV4!0.82!8.91!ETV4;;chr5:138609489..138609542,+!p8@MATR3!0.82!5.65!MATR3;;chr17:47492203..47492214,-!p3@PHB!0.80!8.62!PHB;;chr17:48046543..48046575,+!p2@DLX4!0.80!5.37!DLX4;;chr5:2751785..2751808,-!p2@IRX2!0.80!5.37!IRX2;;chr9:129376201..129376225,+!p1@LMX1B!0.80!5.37!LMX1B;;chr19:926001..926046,+!p1@ARID3A!0.79!19.08!ARID3A;;chr10:64576105..64576133,-!p1@EGR2!0.79!11.31!EGR2;;chr13:28543253..28543276,-!p5@CDX2!0.79!5.23!CDX2;;chr1:247171347..247171366,-!p2@ZNF695!0.78!9.61!ZNF695;;chr14:37131058..37131139,+!p1@PAX9!0.78!5.09!PAX9;;chr18:53069219..53069253,-!p35@TCF4!0.78!5.09!TCF4;;chr12:121416340..121416360,+!p1@HNF1A!0.77!4.95!HNF1A;;chr10:96122645..96122675,-!p2@NOC3L!0.76!24.88!NOC3L;;chr18:52989565..52989623,-!p9@TCF4!0.76!6.22!TCF4;;chr18:53069201..53069216,-!p39@TCF4!0.76!4.81!TCF4;;chr11:19262421..19262455,-!p3@E2F8!0.76!4.81!E2F8;;chr19:45971246..45971265,+!p1@FOSB!0.75!94.71!FOSB;;chr4:4861385..4861398,+!p1@MSX1!0.75!14.70!MSX1;;chr5:124084493..124084524,-!p2@ZNF608!0.75!11.17!ZNF608;;chr1:214161272..214161322,+!p1@PROX1!0.75!6.78!PROX1;;chr1:3569072..3569093,+!p1@TP73!0.75!4.66!TP73;;chr12:54694653..54694672,-!p2@NFE2!0.75!4.66!NFE2;;chr13:79177674..79177701,-!p1@POU4F1!0.75!4.66!POU4F1;;chr18:19749353..19749367,+!p4@GATA6!0.74!4.52!GATA6;;chr19:926055..926068,+!p2@ARID3A!0.73!10.18!ARID3A;;chr5:76383133..76383186,-!p2@ZBED3!0.73!9.47!ZBED3;;chr17:41622925..41622976,-!p3@ETV4!0.73!6.93!ETV4;;chr18:19749504..19749515,+!p5@GATA6!0.73!4.38!GATA6;;chr7:115608319..115608352,-!p4@TFEC!0.73!4.38!TFEC;;chr11:19262461..19262476,-!p5@E2F8!0.73!4.38!E2F8;;chr12:50479109..50479146,+!p2@SMARCD1!0.72!82.27!SMARCD1;;chr17:41277372..41277418,-!p1@BRCA1!0.72!16.96!BRCA1;;chr11:2291814..2291825,-!p2@ASCL2!0.72!4.24!ASCL2;;chr13:79177703..79177729,-!p2@POU4F1!0.72!4.24!POU4F1;;chr7:35293685..35293718,-!p1@TBX20!0.72!4.24!TBX20;;chr4:111544219..111544240,-!p1@PITX2!0.72!4.24!PITX2;;chr12:2986275..2986363,-!p1@FOXM1!0.71!47.35!FOXM1;;chr8:102504979..102505010,+!p2@GRHL2!0.71!4.10!GRHL2;;chr6:21597765..21597779,+!p2@SOX4!0.70!36.47!SOX4;;chr8:37963466..37963506,+!p3@ASH2L!0.70!5.23!ASH2L;;chr12:3068634..3068656,+!p5@TEAD4!0.70!3.96!TEAD4;;chr10:63853436..63853442,+!p4@ARID5B!0.69!23.46!ARID5B;;chr17:47492236..47492251,-!p1@PHB!0.68!61.63!PHB;;chr20:32274179..32274213,-!p1@E2F1!0.68!28.55!E2F1;;chr2:171571909..171571920,+!p9@SP5!0.68!3.82!SP5;;chr2:171572525..171572547,+!p6@SP5!0.68!3.82!SP5;;chr6:41514078..41514158,+!p1@FOXP4!0.67!38.31!FOXP4;;chr5:137804484..137804498,+!p2@EGR1!0.67!16.54!EGR1;;chr17:70117153..70117174,+!p1@SOX9!0.66!42.26!SOX9;;chr12:7079780..7079791,-!p2@PHB2!0.66!21.63!PHB2;;chr10:70320074..70320106,+!p1@TET1!0.66!7.92!TET1;;chr6:1312155..1312187,+!p2@FOXQ1!0.66!3.53!FOXQ1;;chr7:27205136..27205164,-!p1@HOXA9!0.66!3.53!HOXA9;;chr6:126240463..126240489,+!p6@NCOA7!0.65!3.96!NCOA7;;chr2:42795745..42795824,+!p1@MTA3!0.64!36.47!MTA3;;chr3:32023232..32023273,+!p1@ZNF860!0.64!5.09!ZNF860;;chrX:84498989..84499003,+!p1@ZNF711!0.64!4.81!ZNF711;;chr11:19263192..19263222,-!p2@E2F8!0.64!4.24!E2F8;;chr12:3068544..3068597,+!p1@TEAD4!0.63!23.18!TEAD4;;chr15:41913690..41913753,+!p2@MGA!0.63!8.76!MGA;;chr20:42984073..42984085,+!p5@HNF4A!0.63!3.25!HNF4A;;chr13:41635512..41635539,-!p2@ELF1!0.62!21.06!ELF1;;chr3:40547564..40547616,+!p1@ZNF620!0.62!4.81!ZNF620;;chr10:114710098..114710130,+!p2@TCF7L2!0.61!27.85!TCF7L2;;chr11:46299199..46299233,+!p1@CREB3L1!0.61!18.94!CREB3L1;;chr12:51566562..51566584,-!p2@TFCP2!0.61!9.89!TFCP2;;chr1:45805872..45805900,+!p2@TOE1!0.61!8.48!TOE1;;chr15:96873861..96873872,+!p9@NR2F2!0.61!7.21!NR2F2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.61!3.11!HOXC5;;chr2:73520667..73520683,-!p1@EGR4!0.61!3.11!EGR4;;chr7:64838786..64838809,+!p2@ZNF92!0.60!20.35!ZNF92;;chr5:133450365..133450444,+!p1@TCF7!0.60!16.26!TCF7;;chr17:41623692..41623715,-!p1@ETV4!0.60!14.98!ETV4;;chr16:54320675..54320715,-!p1@IRX3!0.60!7.21!IRX3;;chr10:48355030..48355090,+!p1@ZNF488!0.60!4.10!ZNF488;;chr6:28048343..28048354,+!p1@ZNF165!0.60!2.97!ZNF165;;chr9:138591341..138591346,-!p3@SOHLH1!0.60!2.97!SOHLH1;;chr2:171571796..171571808,+!p4@SP5!0.60!2.97!SP5;;chr5:137801160..137801176,+!p1@EGR1!0.59!356.49!EGR1;;chr20:30795511..30795562,-!p1@PLAGL2!0.59!63.47!PLAGL2;;chr19:17356189..17356221,-!p2@NR2F6!0.59!5.23!NR2F6;;chr15:76629123..76629151,+!p1@ISL2!0.59!3.25!ISL2;;chr12:2986206..2986258,-!p2@FOXM1!0.58!20.50!FOXM1;;chr12:80084737..80084763,-!p3@PAWR!0.58!12.58!PAWR;;chr8:71316428..71316459,-!p2@NCOA2!0.58!5.23!NCOA2;;chr17:46688334..46688385,-!p1@HOXB7!0.58!4.38!HOXB7;;chr17:74137321..74137337,-!p1@FOXJ1!0.58!2.83!FOXJ1;;chr7:101917407..101917443,+!p3@CUX1!0.58!2.83!CUX1;;chr2:25475094..25475112,-!p3@DNMT3A!0.58!2.83!DNMT3A;;chr20:43030002..43030028,+!p3@HNF4A!0.58!2.83!HNF4A;;chr13:28543409..28543420,-!p8@CDX2!0.58!2.83!CDX2;;chr7:26191809..26191890,+!p1@NFE2L3!0.57!16.40!NFE2L3;;chr1:149871171..149871192,+!p4@BOLA1!0.57!7.21!BOLA1;;chr12:50479101..50479108,+!p3@SMARCD1!0.57!4.81!SMARCD1;;chr16:54320617..54320643,-!p3@IRX3!0.57!3.68!IRX3;;chr1:209979411..209979433,-!p2@IRF6!0.57!2.69!IRF6;;chr20:18038521..18038571,-!p1@OVOL2!0.57!2.69!OVOL2;;chr2:171572483..171572501,+!p5@SP5!0.57!2.69!SP5;;chr2:171572699..171572713,+!p7@SP5!0.57!2.69!SP5;;chr7:101917447..101917479,+!p4@CUX1!0.57!2.69!CUX1;;chr12:115121962..115121987,-!p1@TBX3!0.56!27.42!TBX3;;chr19:53636125..53636178,-!p1@ZNF415!0.56!8.91!ZNF415;;chr20:6748325..6748352,+!p1@BMP2!0.56!4.10!BMP2;;chr6:126240356..126240379,+!p7@NCOA7!0.56!3.39!NCOA7;;chr10:51565239..51565263,+!p2@NCOA4!0.55!75.20!NCOA4;;chr3:71179699..71179744,-!p2@FOXP1!0.55!24.03!FOXP1;;chr1:23857698..23857733,-!p1@E2F2!0.55!5.23!E2F2;;chr16:54320646..54320672,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;;chr6:35464817..35464894,-!p1@TEAD3!0.15!19.08!TEAD3;;chr2:27805880..27805967,+!p1@ZNF512!0.15!17.10!ZNF512;;chr6:155635583..155635644,-!p1@TFB1M!0.15!15.69!TFB1M;;chr12:77459306..77459365,-!p1@E2F7!0.15!15.27!E2F7;;chr3:44690211..44690267,+!p1@ZNF35!0.15!10.32!ZNF35;;chr11:67007548..67007610,+!p3@KDM2A!0.15!8.91!KDM2A;;chr2:42795839..42795887,+!p2@MTA3!0.15!7.92!MTA3;;chr8:10697329..10697365,-!p2@PINX1,p2@SOX7!0.15!7.77!SOX7;;chr1:227751231..227751273,+!p1@ZNF678!0.15!7.49!ZNF678;;chr16:30621663..30621718,-!p1@ZNF689!0.15!5.51!ZNF689;;chr10:35415978..35416050,+!p5@CREM!0.15!4.52!CREM;;chr19:20011744..20011770,+!p1@ZNF93!0.15!4.24!ZNF93;;chr19:11071652..11071682,+!p3@SMARCA4!0.15!3.68!SMARCA4;;chr15:37393449..37393528,-!p4@MEIS2!0.15!2.69!MEIS2;;chr20:44600496..44600541,-!p2@ZNF335!0.15!2.54!ZNF335;;chr3:12329397..12329433,+!p2@PPARG!0.15!2.12!PPARG;;chr11:615570..615721,-!p2@IRF7!0.15!1.70!IRF7;;chr19:19496539..19496576,+!p8@GATAD2A!0.15!1.41!GATAD2A;;chr1:91487806..91487826,-!p5@ZNF644!0.15!1.41!ZNF644;;chr1:204042723..204042784,+!p3@SOX13!0.15!1.27!SOX13;;chr16:29818199..29818216,+!p11@MAZ!0.15!1.27!MAZ;;chr12:6798731..6798751,-!p4@ZNF384!0.15!1.13!ZNF384;;chr19:53466067..53466087,-!p3@ZNF321P,p3@ZNF816-ZNF321P,p3@ZNF816!0.15!1.13!ZNF816;;chr9:32550965..32551031,-!p4@TOPORS!0.15!1.13!TOPORS;;chr6:168227611..168227624,+!p2@MLLT4!0.15!0.99!MLLT4;;chr1:78445179..78445193,-!p5@FUBP1!0.15!0.99!FUBP1;;chr6:151712968..151712992,-!p5@ZBTB2!0.15!0.85!ZBTB2;;chr6:21597283..21597312,+!p7@SOX4!0.15!0.85!SOX4;;chr11:57103283..57103290,-!p3@SSRP1!0.15!0.85!SSRP1;;chr14:58817788..58817805,+!p5@ARID4A!0.15!0.71!ARID4A;;chr6:10415276..10415341,-!p2@TFAP2A!0.15!0.71!TFAP2A;;chr8:124286761..124286773,-!p4@ZHX1!0.15!0.71!ZHX1;;chr7:1577111..1577132,+!p4@MAFK!0.15!0.57!MAFK;;chr5:124082470..124082483,-!p8@ZNF608!0.15!0.42!ZNF608;;chr5:180288373..180288380,-!p5@ZFP62!0.15!0.42!ZFP62;;chr6:27356595..27356611,+!p6@ZNF391!0.15!0.42!ZNF391;;chr6:27440578..27440596,-!p8@ZNF184!0.15!0.42!ZNF184;;chr6:32095504..32095516,-!p9@ATF6B!0.15!0.42!ATF6B;;chr6:34524093..34524135,-!p1@SPDEF!0.15!0.42!SPDEF;;chr7:149470826..149470844,-!p6@ZNF467!0.15!0.42!ZNF467;;chr7:20826426..20826432,-!p2@SP8!0.15!0.42!SP8;;chr7:35293665..35293680,-!p2@TBX20!0.15!0.42!TBX20;;chr7:64363682..64363692,+!p4@ZNF273!0.15!0.42!ZNF273;;chr7:96635178..96635181,+!p1@DLX6!0.15!0.42!DLX6;;chr7:96635448..96635470,+!p5@DLX6!0.15!0.42!DLX6;;chr8:86089472..86089483,+!p9@E2F5!0.15!0.42!E2F5;;chrX:118739782..118739829,-!p2@NKRF!0.15!0.42!NKRF;;chr15:57025732..57025743,-!p6@ZNF280D!0.15!0.42!ZNF280D;;chr15:76629064..76629073,+!p3@ISL2!0.15!0.42!ISL2;;chr15:96869165..96869183,+!p20@NR2F2!0.15!0.42!NR2F2;;chr16:54320127..54320148,-!p6@IRX3!0.15!0.42!IRX3;;chr16:54320280..54320291,-!p9@IRX3!0.15!0.42!IRX3;;chr16:67881534..67881549,-!p4@CENPT!0.15!0.42!CENPT;;chr16:67881617..67881626,-!p6@CENPT!0.15!0.42!CENPT;;chr17:26695013..26695024,-!p7@SEBOX!0.15!0.42!SEBOX;;chr17:40469457..40469494,-!p14@STAT3!0.15!0.42!STAT3;;chr17:41623634..41623645,-!p15@ETV4!0.15!0.42!ETV4;;chr17:70121709..70121718,+!p2@SOX9!0.15!0.42!SOX9;;chr17:7197881..7197901,-!p3@YBX2!0.15!0.42!YBX2;;chr18:32870122..32870133,-!p2@ZSCAN30!0.15!0.42!ZSCAN30;;chr18:53255323..53255332,-!p31@TCF4!0.15!0.42!TCF4;;chr19:12405588..12405595,-!p4@ZNF44!0.15!0.42!ZNF44;;chr19:12444399..12444415,-!p5@ZNF563!0.15!0.42!ZNF563;;chr19:16435423..16435484,+!p5@KLF2!0.15!0.42!KLF2;;chr19:24270027..24270034,+!p8@ZNF254!0.15!0.42!ZNF254;;chr21:43428446..43428452,-!p2@ZNF295!0.15!0.42!ZNF295;;

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FF:10513-107D9: Difference between revisions

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Revision as of 13:37, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0