FF:11307-117C2: Difference between revisions
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase=1 | |||
|def= | |def= | ||
|expression_enrichment_score=chr1:25256756..25256774,-!p1@RUNX3!2.51!583.55!RUNX3;;chr2:192015701..192015743,-!p1@STAT4!2.16!193.63!STAT4;;chr2:157189180..157189290,-!p1@NR4A2!2.12!638.65!NR4A2;;chr19:45971246..45971265,+!p1@FOSB!2.10!2160.38!FOSB;;chr17:45810594..45810608,+!p1@TBX21!2.07!117.14!TBX21;;chr20:50159198..50159299,-!p1@NFATC2!2.01!143.88!NFATC2;;chr1:26697243..26697258,-!p1@ZNF683!1.99!97.35!ZNF683;;chr9:102584262..102584276,+!p1@NR4A3!1.98!204.32!NR4A3;;chr10:8096631..8096660,+!p1@GATA3!1.97!111.26!GATA3;;chr9:117150254..117150271,-!p1@AKNA!1.93!220.37!AKNA;;chr19:54058073..54058088,+!p1@ZNF331!1.88!75.15!ZNF331;;chr10:8096772..8096787,+!p2@GATA3!1.87!85.31!GATA3;;chr14:75745523..75745537,+!p1@FOS!1.85!7735.44!FOS;;chr14:75746722..75746777,+!p2@FOS!1.82!81.84!FOS;;chr19:54041669..54041697,+!p2@ZNF331!1.82!65.79!ZNF331;;chr15:60884706..60884743,-!p1@RORA!1.80!301.94!RORA;;chr7:50343634..50343717,+!p2@IKZF1!1.78!59.10!IKZF1;;chr2:231090433..231090469,+!p1@SP140!1.71!50.81!SP140;;chrX:106960285..106960299,-!p1@TSC22D3!1.68!1170.59!TSC22D3;;chr17:38020392..38020477,-!p1@IKZF3!1.68!47.07!IKZF3;;chr5:133450365..133450444,+!p1@TCF7!1.65!188.81!TCF7;;chr20:56195474..56195506,-!p1@ZBP1!1.65!43.86!ZBP1;;chr3:39195075..39195088,-!p1@CSRNP1!1.64!257.54!CSRNP1;;chr2:145271342..145271377,-!p5@ZEB2!1.64!43.06!ZEB2;;chr2:192015677..192015691,-!p3@STAT4!1.64!42.52!STAT4;;chr18:46475696..46475713,-!p1@SMAD7!1.63!46.53!SMAD7;;chr6:106546808..106546833,+!p3@PRDM1!1.62!50.81!PRDM1;;chr1:26697189..26697205,-!p2@ZNF683!1.62!40.92!ZNF683;;chr9:3525727..3525828,-!p2@RFX3!1.61!97.62!RFX3;;chr9:102584241..102584261,+!p4@NR4A3!1.61!61.24!NR4A3;;chr12:72056800..72056834,+!p1@THAP2!1.60!51.35!THAP2;;chr3:27763807..27763822,-!p1@EOMES!1.60!38.78!EOMES;;chr10:35484053..35484076,+!p1@CREM!1.59!92.00!CREM;;chr8:123793988..123794016,+!p1@ZHX2!1.58!64.19!ZHX2;;chrY:21906594..21906622,-!p1@KDM5D!1.58!36.91!KDM5D;;chr19:19729477..19729542,-!p1@PBX4!1.57!74.62!PBX4;;chr19:16435625..16435682,+!p1@KLF2!1.55!1048.90!KLF2;;chr1:59249688..59249703,-!p3@JUN!1.55!197.64!JUN;;chr3:63953435..63953499,+!p1@ATXN7!1.55!34.23!ATXN7;;chr2:61108878..61108891,+!p5@REL!1.54!33.43!REL;;chr10:3824332..3824425,-!p4@KLF6!1.52!50.55!KLF6;;chr14:64971288..64971316,-!p2@ZBTB25!1.51!94.94!ZBTB25;;chr9:102584128..102584144,+!p3@NR4A3!1.50!57.77!NR4A3;;chr1:25291475..25291511,-!p2@RUNX3!1.49!30.22!RUNX3;;chr3:5020939..5020952,+!p2@BHLHE40!1.46!84.24!BHLHE40;;chrX:106960221..106960236,-!p3@TSC22D3!1.46!74.62!TSC22D3;;chr2:192015750..192015793,-!p2@STAT4!1.45!36.64!STAT4;;chr2:43453734..43453751,-!p1@ZFP36L2!1.44!2696.60!ZFP36L2;;chr1:59249707..59249727,-!p1@JUN!1.43!1047.30!JUN;;chr3:23986824..23986848,+!p2@NR1D2!1.43!139.07!NR1D2;;chr7:104654690..104654704,+!p2@MLL5!1.43!51.08!MLL5;;chr4:103422499..103422632,+!p1@NFKB1!1.42!503.86!NFKB1;;chr6:91006518..91006570,-!p1@BACH2!1.42!57.50!BACH2;;chr7:104654718..104654741,+!p3@MLL5!1.42!36.64!MLL5;;chr4:57522166..57522260,-!p2@HOPX!1.42!28.88!HOPX;;chr2:231090471..231090504,+!p2@SP140!1.42!25.41!SP140;;chr4:57522674..57522699,-!p5@HOPX!1.42!25.14!HOPX;;chr14:35873947..35873965,-!p1@NFKBIA!1.41!1497.67!NFKBIA;;chrX:106960180..106960197,-!p2@TSC22D3!1.41!91.20!TSC22D3;;chr8:67525443..67525459,-!p2@MYBL1!1.40!35.57!MYBL1;;chr9:102584278..102584285,+!p5@NR4A3!1.40!24.34!NR4A3;;chr5:133451294..133451310,+!p2@TCF7!1.39!23.53!TCF7;;chr2:61108695..61108753,+!p1@REL!1.38!152.44!REL;;chr17:37934365..37934387,-!p2@IKZF3!1.38!23.00!IKZF3;;chr19:54041645..54041661,+!p5@ZNF331!1.38!23.00!ZNF331;;chr12:51158359..51158395,+!p4@ATF1!1.38!22.73!ATF1;;chr5:131826457..131826514,-!p1@IRF1!1.37!839.49!IRF1;;chr14:35872453..35872485,-!p2@NFKBIA!1.37!54.02!NFKBIA;;chr13:74707894..74707947,-!p6@KLF12!1.37!25.14!KLF12;;chr7:50343895..50343936,+!p5@IKZF1!1.37!22.46!IKZF1;;chr6:391743..391759,+!p1@IRF4!1.37!22.20!IRF4;;chr17:38497662..38497713,+!p4@RARA!1.35!24.60!RARA;;chr2:61108808..61108821,+!p3@REL!1.34!26.48!REL;;chr2:97202480..97202499,+!p1@ARID5A!1.31!189.88!ARID5A;;chr2:208394817..208394834,+!p3@CREB1!1.31!76.49!CREB1;;chr20:44600199..44600219,-!p3@ZNF335!1.28!24.07!ZNF335;;chr8:81397820..81397836,+!p2@ZBTB10!1.28!22.46!ZBTB10;;chr1:37940170..37940190,+!p1@ZC3H12A!1.27!210.74!ZC3H12A;;chr12:72056773..72056796,+!p3@THAP2!1.27!23.00!THAP2;;chr6:106546834..106546850,+!p4@PRDM1!1.26!17.38!PRDM1;;chr19:12902289..12902307,+!p1@JUNB!1.25!3755.13!JUNB;;chr11:67007548..67007610,+!p3@KDM2A!1.25!121.69!KDM2A;;chr10:35416142..35416169,+!p3@CREM!1.25!44.40!CREM;;chr3:39195037..39195069,-!p2@CSRNP1!1.24!101.09!CSRNP1;;chr8:81397846..81397860,+!p3@ZBTB10!1.24!20.59!ZBTB10;;chr1:25256175..25256228,-!p5@RUNX3!1.24!16.31!RUNX3;;chr1:10754477..10754517,-!p1@CASZ1!1.23!26.48!CASZ1;;chr16:89789271..89789291,+!p5@ZNF276!1.23!16.05!ZNF276;;chr4:38665769..38665801,+!p2@KLF3!1.22!139.60!KLF3;;chr3:39195139..39195150,-!p3@CSRNP1!1.22!19.79!CSRNP1;;chr2:157186630..157186686,-!p6@NR4A2!1.22!15.51!NR4A2;;chr14:35874077..35874091,-!p8@NFKBIA!1.22!15.51!NFKBIA;;chr3:18486354..18486377,-!p2@SATB1!1.21!18.99!SATB1;;chr21:36421347..36421380,-!p8@RUNX1!1.21!15.24!RUNX1;;chr9:102584159..102584174,+!p2@NR4A3!1.20!26.48!NR4A3;;chr8:81397876..81397898,+!p5@ZBTB10!1.20!17.38!ZBTB10;;chr17:38020557..38020572,-!p4@IKZF3!1.20!14.98!IKZF3;;chr2:97202991..97203043,+!p3@ARID5A!1.20!14.98!ARID5A;;chr4:57522598..57522664,-!p3@HOPX!1.20!14.71!HOPX;;chr7:17338324..17338341,+!p3@AHR!1.19!47.87!AHR;;chr10:3827389..3827408,-!p1@KLF6!1.18!1054.52!KLF6;;chr2:145277640..145277771,-!p1@ZEB2!1.18!184.80!ZEB2;;chr1:59249645..59249656,-!p4@JUN!1.18!35.84!JUN;;chr4:149365827..149365870,-!p5@NR3C2!1.18!14.17!NR3C2;;chr14:99738138..99738163,-!p1@BCL11B!1.18!14.17!BCL11B;;chr10:35484090..35484104,+!p6@CREM!1.17!13.91!CREM;;chr18:46477458..46477479,-!p4@SMAD7!1.17!13.64!SMAD7;;chrX:106960249..106960260,-!p5@TSC22D3!1.16!21.13!TSC22D3;;chr7:106809470..106809481,+!p2@HBP1!1.16!18.99!HBP1;;chr3:71542684..71542720,-!p18@FOXP1!1.16!13.37!FOXP1;;chr13:74708029..74708077,-!p2@KLF12!1.15!37.71!KLF12;;chr14:75746781..75746799,+!p6@FOS!1.15!13.10!FOS;;chr8:123793252..123793266,+!p10@ZHX2!1.15!13.10!ZHX2;;chr14:64971461..64971542,+!p1@ZBTB1!1.14!257.01!ZBTB1;;chr10:104154246..104154347,+!p3@NFKB2!1.14!77.29!NFKB2;;chr12:72056749..72056767,+!p6@THAP2!1.14!14.17!THAP2;;chr1:91487774..91487802,-!p2@ZNF644!1.12!32.63!ZNF644;;chr4:103498623..103498650,+!p9@NFKB1!1.12!12.30!NFKB1;;chr10:8097321..8097348,+!p4@GATA3!1.12!12.30!GATA3;;chr14:75747250..75747267,+!p5@FOS!1.12!12.30!FOS;;chr15:31619140..31619152,+!p11@KLF13!1.12!12.30!KLF13;;chr7:50344251..50344288,+!p3@IKZF1!1.12!12.03!IKZF1;;chr15:60884747..60884774,-!p3@RORA!1.11!29.15!RORA;;chr3:150126904..150126958,+!p7@TSC22D2!1.11!20.86!TSC22D2;;chr11:85375237..85375277,-!p4@CREBZF!1.11!13.64!CREBZF;;chr20:56195525..56195556,-!p2@ZBP1!1.11!11.77!ZBP1;;chr2:157189617..157189667,-!p4@NR4A2!1.11!11.77!NR4A2;;chr8:41909982..41910009,-!p2@KAT6A!1.10!13.10!KAT6A;;chr15:31619326..31619390,+!p2@KLF13!1.09!129.44!KLF13;;chr19:12721790..12721810,+!p2@ZNF791!1.09!31.56!ZNF791;;chr8:60031619..60031676,-!p1@TOX!1.09!24.34!TOX;;chr5:142782823..142782854,-!p3@NR3C1!1.09!16.31!NR3C1;;chr19:54041603..54041615,+!p10@ZNF331!1.09!11.23!ZNF331;;chr11:13299319..13299424,+!p1@ARNTL!1.08!111.52!ARNTL;;chr14:35872962..35873025,-!p3@NFKBIA!1.08!28.08!NFKBIA;;chr1:45805693..45805718,+!p3@TOE1!1.08!24.07!TOE1;;chr14:35872926..35872951,-!p4@NFKBIA!1.08!15.51!NFKBIA;;chr7:127032330..127032356,-!p3@ZNF800!1.08!14.17!ZNF800;;chr8:102218439..102218455,-!p3@ZNF706!1.08!10.97!ZNF706;;chr8:103668114..103668134,-!p5@KLF10!1.08!10.97!KLF10;;chr14:75747296..75747329,+!p4@FOS!1.08!10.97!FOS;;chr19:45504688..45504782,+!p1@RELB!1.07!65.52!RELB;;chr8:67525473..67525518,-!p1@MYBL1!1.07!24.87!MYBL1;;chr15:57211634..57211657,+!p5@TCF12!1.07!16.58!TCF12;;chr14:75988831..75988847,+!p2@BATF!1.07!10.70!BATF;;chr17:45810816..45810838,+!p2@TBX21!1.07!10.70!TBX21;;chr2:68592394..68592405,+!p2@PLEK!1.07!10.70!PLEK;;chr19:54041574..54041589,+!p6@ZNF331!1.07!10.70!ZNF331;;chr1:92951607..92951661,-!p1@GFI1!1.07!10.70!GFI1;;chr19:45972701..45972774,+!p2@FOSB!1.06!14.44!FOSB;;chr10:3827371..3827386,-!p2@KLF6!1.05!86.65!KLF6;;chr13:41240717..41240735,-!p2@FOXO1!1.05!70.07!FOXO1;;chr11:67007611..67007622,+!p6@KDM2A!1.05!13.64!KDM2A;;chr10:135121763..135121783,+!p5@ZNF511!1.05!10.16!ZNF511;;chr8:123794038..123794056,+!p5@ZHX2!1.05!10.16!ZHX2;;chr19:45977697..45977713,+!p4@FOSB!1.05!10.16!FOSB;;chr11:67007477..67007493,+!p2@KDM2A!1.04!86.12!KDM2A;;chr17:40440481..40440550,+!p1@STAT5A!1.04!72.48!STAT5A;;chr3:23986876..23986885,+!p4@NR1D2!1.04!14.17!NR1D2;;chr10:35416223..35416234,+!p12@CREM!1.04!9.90!CREM;;chr7:50344289..50344323,+!p1@IKZF1!1.04!9.90!IKZF1;;chr11:128392085..128392232,-!p1@ETS1!1.03!331.09!ETS1;;chr1:153895251..153895342,-!p2@GATAD2B!1.03!36.10!GATAD2B;;chr2:174828545..174828644,-!p1@SP3!1.02!146.82!SP3;;chr1:59249732..59249749,-!p2@JUN!1.02!115.53!JUN;;chr2:28616358..28616380,+!p3@FOSL2!1.02!50.28!FOSL2;;chr3:71542651..71542683,-!p22@FOXP1!1.02!9.36!FOXP1;;chr14:99737850..99737852,-!p3@BCL11B!1.02!9.36!BCL11B;;chr19:16435735..16435773,+!p4@KLF2!1.02!9.36!KLF2;;chr19:18392422..18392440,-!p1@JUND!1.01!1292.81!JUND;;chr3:5021113..5021180,+!p1@BHLHE40!1.01!652.55!BHLHE40;;chr6:91006575..91006602,-!p2@BACH2!1.01!13.91!BACH2;;chr14:35872494..35872511,-!p5@NFKBIA!1.01!12.30!NFKBIA;;chr3:63898321..63898396,+!p3@ATXN7!1.00!20.86!ATXN7;;chr19:18391593..18391611,-!p6@JUND!1.00!14.98!JUND;;chr6:106546786..106546802,+!p6@PRDM1!1.00!9.09!PRDM1;;chr14:90085458..90085557,-!p1@FOXN3!0.99!93.87!FOXN3;;chr14:74353454..74353469,+!p4@ZNF410!0.99!17.12!ZNF410;;chr15:31619407..31619419,+!p9@KLF13!0.99!10.97!KLF13;;chr14:69262947..69262986,-!p3@ZFP36L1!0.99!10.70!ZFP36L1;;chr17:38020516..38020544,-!p5@IKZF3!0.99!8.83!IKZF3;;chr3:71542615..71542644,-!p12@FOXP1!0.99!8.83!FOXP1;;chr9:129567282..129567353,+!p1@ZBTB43!0.98!115.80!ZBTB43;;chr9:32550839..32550962,-!p3@TOPORS!0.98!21.66!TOPORS;;chr17:36861675..36861697,+!p3@MLLT6!0.98!20.33!MLL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| |expression_enrichment_score=chr1:25256756..25256774,-!p1@RUNX3!2.51!583.55!RUNX3;;chr2:192015701..192015743,-!p1@STAT4!2.16!193.63!STAT4;;chr2:157189180..157189290,-!p1@NR4A2!2.12!638.65!NR4A2;;chr19:45971246..45971265,+!p1@FOSB!2.10!2160.38!FOSB;;chr17:45810594..45810608,+!p1@TBX21!2.07!117.14!TBX21;;chr20:50159198..50159299,-!p1@NFATC2!2.01!143.88!NFATC2;;chr1:26697243..26697258,-!p1@ZNF683!1.99!97.35!ZNF683;;chr9:102584262..102584276,+!p1@NR4A3!1.98!204.32!NR4A3;;chr10:8096631..8096660,+!p1@GATA3!1.97!111.26!GATA3;;chr9:117150254..117150271,-!p1@AKNA!1.93!220.37!AKNA;;chr19:54058073..54058088,+!p1@ZNF331!1.88!75.15!ZNF331;;chr10:8096772..8096787,+!p2@GATA3!1.87!85.31!GATA3;;chr14:75745523..75745537,+!p1@FOS!1.85!7735.44!FOS;;chr14:75746722..75746777,+!p2@FOS!1.82!81.84!FOS;;chr19:54041669..54041697,+!p2@ZNF331!1.82!65.79!ZNF331;;chr15:60884706..60884743,-!p1@RORA!1.80!301.94!RORA;;chr7:50343634..50343717,+!p2@IKZF1!1.78!59.10!IKZF1;;chr2:231090433..231090469,+!p1@SP140!1.71!50.81!SP140;;chrX:106960285..106960299,-!p1@TSC22D3!1.68!1170.59!TSC22D3;;chr17:38020392..38020477,-!p1@IKZF3!1.68!47.07!IKZF3;;chr5:133450365..133450444,+!p1@TCF7!1.65!188.81!TCF7;;chr20:56195474..56195506,-!p1@ZBP1!1.65!43.86!ZBP1;;chr3:39195075..39195088,-!p1@CSRNP1!1.64!257.54!CSRNP1;;chr2:145271342..145271377,-!p5@ZEB2!1.64!43.06!ZEB2;;chr2:192015677..192015691,-!p3@STAT4!1.64!42.52!STAT4;;chr18:46475696..46475713,-!p1@SMAD7!1.63!46.53!SMAD7;;chr6:106546808..106546833,+!p3@PRDM1!1.62!50.81!PRDM1;;chr1:26697189..26697205,-!p2@ZNF683!1.62!40.92!ZNF683;;chr9:3525727..3525828,-!p2@RFX3!1.61!97.62!RFX3;;chr9:102584241..102584261,+!p4@NR4A3!1.61!61.24!NR4A3;;chr12:72056800..72056834,+!p1@THAP2!1.60!51.35!THAP2;;chr3:27763807..27763822,-!p1@EOMES!1.60!38.78!EOMES;;chr10:35484053..35484076,+!p1@CREM!1.59!92.00!CREM;;chr8:123793988..123794016,+!p1@ZHX2!1.58!64.19!ZHX2;;chrY:21906594..21906622,-!p1@KDM5D!1.58!36.91!KDM5D;;chr19:19729477..19729542,-!p1@PBX4!1.57!74.62!PBX4;;chr19:16435625..16435682,+!p1@KLF2!1.55!1048.90!KLF2;;chr1:59249688..59249703,-!p3@JUN!1.55!197.64!JUN;;chr3:63953435..63953499,+!p1@ATXN7!1.55!34.23!ATXN7;;chr2:61108878..61108891,+!p5@REL!1.54!33.43!REL;;chr10:3824332..3824425,-!p4@KLF6!1.52!50.55!KLF6;;chr14:64971288..64971316,-!p2@ZBTB25!1.51!94.94!ZBTB25;;chr9:102584128..102584144,+!p3@NR4A3!1.50!57.77!NR4A3;;chr1:25291475..25291511,-!p2@RUNX3!1.49!30.22!RUNX3;;chr3:5020939..5020952,+!p2@BHLHE40!1.46!84.24!BHLHE40;;chrX:106960221..106960236,-!p3@TSC22D3!1.46!74.62!TSC22D3;;chr2:192015750..192015793,-!p2@STAT4!1.45!36.64!STAT4;;chr2:43453734..43453751,-!p1@ZFP36L2!1.44!2696.60!ZFP36L2;;chr1:59249707..59249727,-!p1@JUN!1.43!1047.30!JUN;;chr3:23986824..23986848,+!p2@NR1D2!1.43!139.07!NR1D2;;chr7:104654690..104654704,+!p2@MLL5!1.43!51.08!MLL5;;chr4:103422499..103422632,+!p1@NFKB1!1.42!503.86!NFKB1;;chr6:91006518..91006570,-!p1@BACH2!1.42!57.50!BACH2;;chr7:104654718..104654741,+!p3@MLL5!1.42!36.64!MLL5;;chr4:57522166..57522260,-!p2@HOPX!1.42!28.88!HOPX;;chr2:231090471..231090504,+!p2@SP140!1.42!25.41!SP140;;chr4:57522674..57522699,-!p5@HOPX!1.42!25.14!HOPX;;chr14:35873947..35873965,-!p1@NFKBIA!1.41!1497.67!NFKBIA;;chrX:106960180..106960197,-!p2@TSC22D3!1.41!91.20!TSC22D3;;chr8:67525443..67525459,-!p2@MYBL1!1.40!35.57!MYBL1;;chr9:102584278..102584285,+!p5@NR4A3!1.40!24.34!NR4A3;;chr5:133451294..133451310,+!p2@TCF7!1.39!23.53!TCF7;;chr2:61108695..61108753,+!p1@REL!1.38!152.44!REL;;chr17:37934365..37934387,-!p2@IKZF3!1.38!23.00!IKZF3;;chr19:54041645..54041661,+!p5@ZNF331!1.38!23.00!ZNF331;;chr12:51158359..51158395,+!p4@ATF1!1.38!22.73!ATF1;;chr5:131826457..131826514,-!p1@IRF1!1.37!839.49!IRF1;;chr14:35872453..35872485,-!p2@NFKBIA!1.37!54.02!NFKBIA;;chr13:74707894..74707947,-!p6@KLF12!1.37!25.14!KLF12;;chr7:50343895..50343936,+!p5@IKZF1!1.37!22.46!IKZF1;;chr6:391743..391759,+!p1@IRF4!1.37!22.20!IRF4;;chr17:38497662..38497713,+!p4@RARA!1.35!24.60!RARA;;chr2:61108808..61108821,+!p3@REL!1.34!26.48!REL;;chr2:97202480..97202499,+!p1@ARID5A!1.31!189.88!ARID5A;;chr2:208394817..208394834,+!p3@CREB1!1.31!76.49!CREB1;;chr20:44600199..44600219,-!p3@ZNF335!1.28!24.07!ZNF335;;chr8:81397820..81397836,+!p2@ZBTB10!1.28!22.46!ZBTB10;;chr1:37940170..37940190,+!p1@ZC3H12A!1.27!210.74!ZC3H12A;;chr12:72056773..72056796,+!p3@THAP2!1.27!23.00!THAP2;;chr6:106546834..106546850,+!p4@PRDM1!1.26!17.38!PRDM1;;chr19:12902289..12902307,+!p1@JUNB!1.25!3755.13!JUNB;;chr11:67007548..67007610,+!p3@KDM2A!1.25!121.69!KDM2A;;chr10:35416142..35416169,+!p3@CREM!1.25!44.40!CREM;;chr3:39195037..39195069,-!p2@CSRNP1!1.24!101.09!CSRNP1;;chr8:81397846..81397860,+!p3@ZBTB10!1.24!20.59!ZBTB10;;chr1:25256175..25256228,-!p5@RUNX3!1.24!16.31!RUNX3;;chr1:10754477..10754517,-!p1@CASZ1!1.23!26.48!CASZ1;;chr16:89789271..89789291,+!p5@ZNF276!1.23!16.05!ZNF276;;chr4:38665769..38665801,+!p2@KLF3!1.22!139.60!KLF3;;chr3:39195139..39195150,-!p3@CSRNP1!1.22!19.79!CSRNP1;;chr2:157186630..157186686,-!p6@NR4A2!1.22!15.51!NR4A2;;chr14:35874077..35874091,-!p8@NFKBIA!1.22!15.51!NFKBIA;;chr3:18486354..18486377,-!p2@SATB1!1.21!18.99!SATB1;;chr21:36421347..36421380,-!p8@RUNX1!1.21!15.24!RUNX1;;chr9:102584159..102584174,+!p2@NR4A3!1.20!26.48!NR4A3;;chr8:81397876..81397898,+!p5@ZBTB10!1.20!17.38!ZBTB10;;chr17:38020557..38020572,-!p4@IKZF3!1.20!14.98!IKZF3;;chr2:97202991..97203043,+!p3@ARID5A!1.20!14.98!ARID5A;;chr4:57522598..57522664,-!p3@HOPX!1.20!14.71!HOPX;;chr7:17338324..17338341,+!p3@AHR!1.19!47.87!AHR;;chr10:3827389..3827408,-!p1@KLF6!1.18!1054.52!KLF6;;chr2:145277640..145277771,-!p1@ZEB2!1.18!184.80!ZEB2;;chr1:59249645..59249656,-!p4@JUN!1.18!35.84!JUN;;chr4:149365827..149365870,-!p5@NR3C2!1.18!14.17!NR3C2;;chr14:99738138..99738163,-!p1@BCL11B!1.18!14.17!BCL11B;;chr10:35484090..35484104,+!p6@CREM!1.17!13.91!CREM;;chr18:46477458..46477479,-!p4@SMAD7!1.17!13.64!SMAD7;;chrX:106960249..106960260,-!p5@TSC22D3!1.16!21.13!TSC22D3;;chr7:106809470..106809481,+!p2@HBP1!1.16!18.99!HBP1;;chr3:71542684..71542720,-!p18@FOXP1!1.16!13.37!FOXP1;;chr13:74708029..74708077,-!p2@KLF12!1.15!37.71!KLF12;;chr14:75746781..75746799,+!p6@FOS!1.15!13.10!FOS;;chr8:123793252..123793266,+!p10@ZHX2!1.15!13.10!ZHX2;;chr14:64971461..64971542,+!p1@ZBTB1!1.14!257.01!ZBTB1;;chr10:104154246..104154347,+!p3@NFKB2!1.14!77.29!NFKB2;;chr12:72056749..72056767,+!p6@THAP2!1.14!14.17!THAP2;;chr1:91487774..91487802,-!p2@ZNF644!1.12!32.63!ZNF644;;chr4:103498623..103498650,+!p9@NFKB1!1.12!12.30!NFKB1;;chr10:8097321..8097348,+!p4@GATA3!1.12!12.30!GATA3;;chr14:75747250..75747267,+!p5@FOS!1.12!12.30!FOS;;chr15:31619140..31619152,+!p11@KLF13!1.12!12.30!KLF13;;chr7:50344251..50344288,+!p3@IKZF1!1.12!12.03!IKZF1;;chr15:60884747..60884774,-!p3@RORA!1.11!29.15!RORA;;chr3:150126904..150126958,+!p7@TSC22D2!1.11!20.86!TSC22D2;;chr11:85375237..85375277,-!p4@CREBZF!1.11!13.64!CREBZF;;chr20:56195525..56195556,-!p2@ZBP1!1.11!11.77!ZBP1;;chr2:157189617..157189667,-!p4@NR4A2!1.11!11.77!NR4A2;;chr8:41909982..41910009,-!p2@KAT6A!1.10!13.10!KAT6A;;chr15:31619326..31619390,+!p2@KLF13!1.09!129.44!KLF13;;chr19:12721790..12721810,+!p2@ZNF791!1.09!31.56!ZNF791;;chr8:60031619..60031676,-!p1@TOX!1.09!24.34!TOX;;chr5:142782823..142782854,-!p3@NR3C1!1.09!16.31!NR3C1;;chr19:54041603..54041615,+!p10@ZNF331!1.09!11.23!ZNF331;;chr11:13299319..13299424,+!p1@ARNTL!1.08!111.52!ARNTL;;chr14:35872962..35873025,-!p3@NFKBIA!1.08!28.08!NFKBIA;;chr1:45805693..45805718,+!p3@TOE1!1.08!24.07!TOE1;;chr14:35872926..35872951,-!p4@NFKBIA!1.08!15.51!NFKBIA;;chr7:127032330..127032356,-!p3@ZNF800!1.08!14.17!ZNF800;;chr8:102218439..102218455,-!p3@ZNF706!1.08!10.97!ZNF706;;chr8:103668114..103668134,-!p5@KLF10!1.08!10.97!KLF10;;chr14:75747296..75747329,+!p4@FOS!1.08!10.97!FOS;;chr19:45504688..45504782,+!p1@RELB!1.07!65.52!RELB;;chr8:67525473..67525518,-!p1@MYBL1!1.07!24.87!MYBL1;;chr15:57211634..57211657,+!p5@TCF12!1.07!16.58!TCF12;;chr14:75988831..75988847,+!p2@BATF!1.07!10.70!BATF;;chr17:45810816..45810838,+!p2@TBX21!1.07!10.70!TBX21;;chr2:68592394..68592405,+!p2@PLEK!1.07!10.70!PLEK;;chr19:54041574..54041589,+!p6@ZNF331!1.07!10.70!ZNF331;;chr1:92951607..92951661,-!p1@GFI1!1.07!10.70!GFI1;;chr19:45972701..45972774,+!p2@FOSB!1.06!14.44!FOSB;;chr10:3827371..3827386,-!p2@KLF6!1.05!86.65!KLF6;;chr13:41240717..41240735,-!p2@FOXO1!1.05!70.07!FOXO1;;chr11:67007611..67007622,+!p6@KDM2A!1.05!13.64!KDM2A;;chr10:135121763..135121783,+!p5@ZNF511!1.05!10.16!ZNF511;;chr8:123794038..123794056,+!p5@ZHX2!1.05!10.16!ZHX2;;chr19:45977697..45977713,+!p4@FOSB!1.05!10.16!FOSB;;chr11:67007477..67007493,+!p2@KDM2A!1.04!86.12!KDM2A;;chr17:40440481..40440550,+!p1@STAT5A!1.04!72.48!STAT5A;;chr3:23986876..23986885,+!p4@NR1D2!1.04!14.17!NR1D2;;chr10:35416223..35416234,+!p12@CREM!1.04!9.90!CREM;;chr7:50344289..50344323,+!p1@IKZF1!1.04!9.90!IKZF1;;chr11:128392085..128392232,-!p1@ETS1!1.03!331.09!ETS1;;chr1:153895251..153895342,-!p2@GATAD2B!1.03!36.10!GATAD2B;;chr2:174828545..174828644,-!p1@SP3!1.02!146.82!SP3;;chr1:59249732..59249749,-!p2@JUN!1.02!115.53!JUN;;chr2:28616358..28616380,+!p3@FOSL2!1.02!50.28!FOSL2;;chr3:71542651..71542683,-!p22@FOXP1!1.02!9.36!FOXP1;;chr14:99737850..99737852,-!p3@BCL11B!1.02!9.36!BCL11B;;chr19:16435735..16435773,+!p4@KLF2!1.02!9.36!KLF2;;chr19:18392422..18392440,-!p1@JUND!1.01!1292.81!JUND;;chr3:5021113..5021180,+!p1@BHLHE40!1.01!652.55!BHLHE40;;chr6:91006575..91006602,-!p2@BACH2!1.01!13.91!BACH2;;chr14:35872494..35872511,-!p5@NFKBIA!1.01!12.30!NFKBIA;;chr3:63898321..63898396,+!p3@ATXN7!1.00!20.86!ATXN7;;chr19:18391593..18391611,-!p6@JUND!1.00!14.98!JUND;;chr6:106546786..106546802,+!p6@PRDM1!1.00!9.09!PRDM1;;chr14:90085458..90085557,-!p1@FOXN3!0.99!93.87!FOXN3;;chr14:74353454..74353469,+!p4@ZNF410!0.99!17.12!ZNF410;;chr15:31619407..31619419,+!p9@KLF13!0.99!10.97!KLF13;;chr14:69262947..69262986,-!p3@ZFP36L1!0.99!10.70!ZFP36L1;;chr17:38020516..38020544,-!p5@IKZF3!0.99!8.83!IKZF3;;chr3:71542615..71542644,-!p12@FOXP1!0.99!8.83!FOXP1;;chr9:129567282..129567353,+!p1@ZBTB43!0.98!115.80!ZBTB43;;chr9:32550839..32550962,-!p3@TOPORS!0.98!21.66!TOPORS;;chr17:36861675..36861697,+!p3@MLLT6!0.98!20.33!MLL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038..145274052,-!p31@ZEB2!0.46!1.87!ZEB2;;chr2:28616301..28616302,+!p9@FOSL2!0.46!1.87!FOSL2;;chr3:18465604..18465618,-!p9@SATB1!0.46!1.87!SATB1;;chr3:18480217..18480239,-!p3@SATB1!0.46!1.87!SATB1;;chr3:27762020..27762023,-!p5@EOMES!0.46!1.87!EOMES;;chr3:5022272..5022321,+!p7@BHLHE40!0.46!1.87!BHLHE40;;chr4:149363662..149363688,-!p6@NR3C2!0.46!1.87!NR3C2;;chr4:83822343..83822355,+!p9@THAP9!0.46!1.87!THAP9;;chrX:118739782..118739829,-!p2@NKRF!0.46!1.87!NKRF;;chr19:24216213..24216314,+!p1@ZNF254!0.45!44.40!ZNF254;;chr12:96588219..96588263,+!p2@ELK3!0.45!17.92!ELK3;;chr1:155532531..155532605,-!p1@ASH1L!0.45!16.85!ASH1L;;chr18:77160282..77160343,+!p2@NFATC1!0.45!15.51!NFATC1;;chr7:148787768..148787825,-!p1@ZNF786!0.45!7.49!ZNF786;;chr8:123794102..123794160,+!p3@ZHX2!0.45!6.42!ZHX2;;chr6:45389791..45389832,+!p3@RUNX2!0.45!5.88!RUNX2;;chr7:1570388..1570418,+!p2@MAFK!0.45!4.81!MAFK;;chr1:151043266..151043295,+!p2@GABPB2!0.45!4.81!GABPB2;;chr3:5021268..5021282,+!p4@BHLHE40!0.45!4.55!BHLHE40;;chr7:27135591..27135658,-!p1@HOXA1!0.45!4.28!HOXA1;;chr7:44924939..44924993,-!p2@PURB!0.45!4.28!PURB;;chr18:51750414..51750449,-!p5@MBD2!0.45!4.28!MBD2;;chr4:38665659..38665670,+!p6@KLF3!0.45!3.74!KLF3;;chr6:45390442..45390479,+!p8@RUNX2!0.45!3.21!RUNX2;;chr6:43337124..43337144,-!p4@ZNF318!0.45!2.94!ZNF318;;chr11:113930425..113930471,+!p1@ZBTB16!0.45!2.94!ZBTB16;;chr4:81118647..81118666,+!p1@PRDM8!0.45!2.67!PRDM8;;chr2:24930357..24930402,+!p3@NCOA1!0.45!2.14!NCOA1;;chr16:3333546..3333558,+!p5@ZNF263!0.45!2.14!ZNF263;;chr14:103058948..103059005,+!p1@RCOR1!0.44!67.93!RCOR1;;chr22:21356016..21356105,-!p1@THAP7!0.44!39.05!THAP7;;chr2:219524310..219524385,-!p1@ZNF142!0.44!36.10!ZNF142;;chr15:41952591..41952672,+!p1@MGA!0.44!33.16!MGA;;chr3:179040767..179040866,+!p1@ZNF639!0.44!25.41!ZNF639;;chr16:89284104..89284150,+!p1@ZNF778!0.44!17.12!ZNF778;;chr19:18392274..18392286,-!p3@JUND!0.44!15.78!JUND;;chr4:140005341..140005411,-!p3@ELF2!0.44!12.84!ELF2;;chr2:174830564..174830605,-!p3@SP3!0.44!11.77!SP3;;chr3:52719888..52719908,-!p2@PBRM1!0.44!11.23!PBRM1;;chr13:74708504..74708549,-!p1@KLF12!0.44!10.70!KLF12;;chrX:134477924..134477988,-!p1@ZNF75D!0.44!8.83!ZNF75D;;chr1:43148792..43148849,+!p2@YBX1!0.44!8.83!YBX1;;chr18:74534479..74534551,+!p1@ZNF236!0.44!6.95!ZNF236;;chr7:99613250..99613264,+!p2@ZKSCAN1!0.44!6.69!ZKSCAN1;;chr19:37958285..37958317,-!p3@ZNF569!0.44!5.88!ZNF569;;chr16:68118689..68118733,+!p3@NFATC3!0.44!5.62!NFATC3;;chr12:108154925..108154945,-!p2@PRDM4!0.44!5.35!PRDM4;;chr6:42419043..42419087,-!p2@TRERF1!0.44!4.28!TRERF1;;chr9:20621927..20621996,-!p3@MLLT3!0.44!3.48!MLLT3;;chr17:53342311..53342400,+!p1@HLF!0.44!2.14!HLF;;chr19:19779686..19779697,+!p3@ZNF101!0.44!2.14!ZNF101;;chr5:16465902..16465917,-!p1@ZNF622!0.43!58.30!ZNF622;;chr2:238600789..238600925,+!p1@LRRFIP1!0.43!48.41!LRRFIP1;;chr6:7107939..7107993,+!p1@RREB1!0.43!28.35!RREB1;;chr12:95467267..95467350,-!p1@NR2C1!0.43!28.35!NR2C1;;chr1:247095194..247095235,-!p1@AHCTF1!0.43!25.67!AHCTF1;;chr7:6676943..6676984,+!p1@ENST00000427912!0.43!21.66!ZNF316;;chr18:72265084..72265143,+!p1@ZNF407!0.43!17.65!ZNF407;;chr17:36861393..36861439,+!p2@MLLT6!0.43!13.91!MLLT6;;chr19:53238260..53238312,-!p1@ZNF611!0.43!8.02!ZNF611;;chr13:20357110..20357121,-!p2@PSPC1!0.43!5.88!PSPC1;;chr21:44394742..44394756,+!p2@PKNOX1!0.43!4.81!PKNOX1;;chr19:4066763..4066779,-!p5@ZBTB7A!0.43!2.94!ZBTB7A;;chr7:21467746..21467758,+!p4@SP4!0.43!2.67!SP4;;chr18:72922858..72922897,+!p4@TSHZ1!0.43!2.14!TSHZ1;;chr3:5022174..5022207,+!p8@BHLHE40!0.43!2.14!BHLHE40;;chr19:1863568..1863586,-!p1@KLF16!0.42!78.36!KLF16;;chr17:2304333..2304364,-!p1@MNT!0.42!32.63!MNT;;chr7:139762641..139762768,-!p1@PARP12!0.42!32.09!PARP12;;chr15:77197655..77197716,-!p1@SCAPER!0.42!20.86!SCAPER;;chr17:47439437..47439533,-!p1@ZNF652!0.42!18.99!ZNF652;;chr9:20622478..20622525,-!p1@MLLT3!0.42!18.19!MLLT3;;chr1:167190091..167190156,+!p1@POU2F1!0.42!18.19!POU2F1;;chr6:108880956..108881011,+!p1@FOXO3!0.42!15.24!FOXO3;;chr17:47439568..47439641,-!p2@ZNF652!0.42!13.10!ZNF652;;chr19:23869970..23869991,-!p1@ZNF675!0.42!8.56!ZNF675;;chr1:78444714..78444725,-!p3@FUBP1!0.42!5.88!FUBP1;;chr3:71007770..71007789,-!p9@FOXP1!0.42!5.62!FOXP1;;chr1:23694697..23694756,-!p3@ZNF436!0.42!4.81!ZNF436;;chr1:247095162..247095173,-!p3@AHCTF1!0.42!2.94!AHCTF1;;chr2:145275211..145275220,-!p14@ZEB2!0.42!2.14!ZEB2;;chr4:103422232..103422241,+!p6@NFKB1!0.42!2.14!NFKB1;;chrX:131624020..131624048,-!p9@MBNL3!0.42!2.14!MBNL3;;chr6:44355478..44355489,+!p5@CDC5L!0.42!1.87!CDC5L;;chr2:24930425..24930435,+!p4@NCOA1!0.42!1.87!NCOA1;;chr19:45254508..45254528,+!p12@BCL3!0.42!1.87!BCL3;;chr19:38085978..38085996,-!p3@ZNF571!0.42!1.60!ZNF571;;chr19:38270528..38270545,-!p2@ZNF573!0.42!1.60!ZNF573;;chr19:45978178..45978185,+!p23@FOSB!0.42!1.60!FOSB;;chr19:54058046..54058053,+!p18@ZNF331!0.42!1.60!ZNF331;;chr1:52991347..52991352,-!p5@ZCCHC11!0.42!1.60!ZCCHC11;;chrX:131623967..131623978,-!p11@MBNL3!0.42!1.60!MBNL3;;chr11:2292226..2292270,-!p1@ASCL2!0.42!1.60!ASCL2;;chr12:72056858..72056869,+!p14@THAP2!0.42!1.60!THAP2;;chr13:41635806..41635828,-!p14@ELF1!0.42!1.60!ELF1;;chr14:35874296..35874308,-!p12@NFKBIA!0.42!1.60!NFKBIA;;chr15:77154812..77154833,-!p5@SCAPER!0.42!1.60!SCAPER;;chr17:37934268..37934277,-!p10@IKZF3!0.42!1.60!IKZF3;;chr22:31741725..31741744,-!p6@PATZ1!0.42!1.60!PATZ1;;chr2:145277589..145277612,-!p12@ZEB2!0.42!1.60!ZEB2;;chr2:157186607..157186620,-!p13@NR4A2!0.42!1.60!NR4A2;;chr2:157189567..157189580,-!p19@NR4A2!0.42!1.60!NR4A2;;chr2:8819364..8819390,+!p2@ID2!0.42!1.60!ID2;;chr2:95831587..95831592,+!p4@ZNF2!0.42!1.60!ZNF2;;chr3:101575889..101575903,+!p3@NFKBIZ!0.42!1.60!NFKBIZ;;chr3:18463329..18463336,-!p15@SATB1!0.42!1.60!SATB1;;chr3:18467290..18467311,-!p8@SATB1!0.42!1.60!SATB1;;chr3:71179687..71179696,-!p54@FOXP1!0.42!1.60!FOXP1;;chr4:109089996..109090012,-!p5@LEF1!0.42!1.60!LEF1;;chr5:142782862..142782881,-!p11@NR3C1!0.42!1.60!NR3C1;;chr5:172484829..172484834,+!p@chr5:172484829..172484834,+!0.42!1.60!CREBRF;;chr7:28220631..28220649,-!p6@JAZF1!0.42!1.60!JAZF1;;chr7:50343800..50343811,+!p8@IKZF1!0.42!1.60!IKZF1;;chr7:50348268..50348366,+!p4@IKZF1!0.42!1.60!IKZF1;;chr7:92076686..92076700,+!p3@GATAD1!0.42!1.60!GATAD1;;chr8:71053651..71053662,-!p24@NCOA2!0.42!1.60!NCOA2;;chr8:71053689..71053698,-!p31@NCOA2!0.42!1.60!NCOA2;;chr9:102583633..102583644,+!p8@NR4A3!0.42!1.60!NR4A3;;chr2:37458692..37458745,-!p1@CEBPZ!0.41!87.45!CEBPZ;;chr17:38219209..38219230,+!p1@THRA!0.41!29.95!THRA;;chr1:173991434..173991556,-!p1@RC3H1!0.41!28.88!RC3H1;;chr5:132299210..132299228,-!p3@AFF4!0.41!26.74!AFF4;;chr12:108154891..108154923,-!p1@PRDM4!0.41!20.33!PRDM4;;chr7:148959269..148959326,+!p1@ZNF783!0.41!18.45!ZNF783;;chr1:93544821..93544861,+!p1@MTF2!0.41!17.92!MTF2;;chr1:38325256..38325280,-!p1@MTF1!0.41!13.91!MTF1;;chr9:37465399..37465454,-!p1@ZBTB5!0.41!9.63!ZBTB5;;chr3:187463220..187463232,-!p3@BCL6!0.41!6.42!BCL6;;chr6:109804367..109804402,-!p2@ZBTB24!0.41!6.15!ZBTB24;;chr19:20150301..20150321,-!p1@ZNF682!0.41!5.35!ZNF682;;chrX:70315688..70315709,+!p1@FOXO4!0.41!4.81!FOXO4;;chr1:6845582..6845591,+!p2@CAMTA1!0.41!4.01!CAMTA1;;chr19:58400344..58400364,-!p2@ZNF814!0.41!2.67!ZNF814;;chr16:67063142..67063153,+!p4@CBFB!0.41!2.67!CBFB;;chr2:174830540..174830563,-!p8@SP3!0.41!2.67!SP3;;chr9:88969287..88969297,-!p3@ZCCHC6!0.41!2.41!ZCCHC6;;chr1:6640110..6640130,+!p2@ZBTB48!0.41!2.41!ZBTB48;;chr1:47903709..47903764,+!p1@BC169308!0.41!1.87!FOXD2;;chr14:58832207..58832210,+!p6@ARID4A!0.41!1.87!ARID4A;;chr1:35658736..35658754,-!p1@SFPQ!0.40!829.06!SFPQ;;chrX:153363125..153363182,-!p1@MECP2!0.40!60.71!MECP2;;chr3:88108381..88108450,+!p1@ENST00000473136!0.40!24.07!ZNF654;;chr14:64970494..64970578,-!p1@ZBTB25!0.40!22.46!ZBTB25;;chr19:52772832..52772861,+!p1@ZNF766!0.40!22.46!ZNF766;;chr3:141868293..141868355,-!p2@TFDP2!0.40!19.52!TFDP2;;chrX:129244454..129244488,-!p1@ELF4!0.40!16.05!ELF4;;chr3:141868357..141868393,-!p3@TFDP2!0.40!14.44!TFDP2;;chr7:99156434..99156510,+!p2@ZNF655!0.40!13.10!ZNF655;;chr8:28243661..28243709,-!p1@ZNF395!0.40!12.57!ZNF395;;chr16:29817433..29817468,+!p8@MAZ!0.40!6.42!MAZ;;chr6:56954830..56954845,+!p3@ZNF451!0.40!4.28!ZNF451;;chr14:100705587..100705600,+!p5@YY1!0.40!3.48!YY1;;chr6:157099159..157099185,+!p6@ARID1B!0.40!3.21!ARID1B;;chr17:56065484..56065497,-!p3@VEZF1!0.40!2.94!VEZF1;;chr8:73921136..73921151,+!p2@TERF1!0.40!2.67!TERF1;;chr6:143266185..143266238,-!p2@HIVEP2!0.40!2.41!HIVEP2;;chr8:81398478..81398495,+!p7@ZBTB10!0.40!2.41!ZBTB10;;chr2:157198760..157198762,-!p5@NR4A2!0.40!2.14!NR4A2;;chr1:78444738..78444773,-!p1@FUBP1!0.39!239.89!FUBP1;;chr1:42800860..42800912,-!p1@FOXJ3!0.39!81.84!FOXJ3;;chr4:144434584..144434709,+!p2@SMARCA5!0.39!52.69!SMARCA5;;chr2:231084659..231084721,-!p1@SP110!0.39!51.88!SP110;;chr3:71114066..71114114,-!p1@FOXP1!0.39!45.20!FOXP1;; 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Revision as of 15:29, 29 June 2012
Name: | CD8+ T Cells, donor2 |
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Species: | Human (Homo sapiens) |
Library ID: | {{{library_id}}} |
Sample type: | {{{sample_category}}} |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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Download raw sequence, BAM & CTSS | ||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
no result for this sample
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11956
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11956
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.954 |
10 | 10 | 0.00619 |
100 | 100 | 0.735 |
101 | 101 | 0.186 |
102 | 102 | 0.774 |
103 | 103 | 0.28 |
104 | 104 | 0.929 |
105 | 105 | 0.91 |
106 | 106 | 0.124 |
107 | 107 | 0.0632 |
108 | 108 | 0.749 |
109 | 109 | 0.986 |
11 | 11 | 0.74 |
110 | 110 | 0.36 |
111 | 111 | 0.476 |
112 | 112 | 0.802 |
113 | 113 | 0.26 |
114 | 114 | 0.701 |
115 | 115 | 0.566 |
116 | 116 | 0.192 |
117 | 117 | 0.0079 |
118 | 118 | 0.537 |
119 | 119 | 0.585 |
12 | 12 | 0.78 |
120 | 120 | 0.253 |
121 | 121 | 0.601 |
122 | 122 | 0.727 |
123 | 123 | 3.68154e-6 |
124 | 124 | 0.972 |
125 | 125 | 0.901 |
126 | 126 | 0.702 |
127 | 127 | 0.397 |
128 | 128 | 0.772 |
129 | 129 | 0.155 |
13 | 13 | 0.672 |
130 | 130 | 0.146 |
131 | 131 | 0.228 |
132 | 132 | 0.284 |
133 | 133 | 0.816 |
134 | 134 | 0.676 |
135 | 135 | 0.185 |
136 | 136 | 0.739 |
137 | 137 | 0.0626 |
138 | 138 | 0.69 |
139 | 139 | 0.102 |
14 | 14 | 0.492 |
140 | 140 | 0.799 |
141 | 141 | 0.948 |
142 | 142 | 0.326 |
143 | 143 | 0.0338 |
144 | 144 | 0.997 |
145 | 145 | 0.499 |
146 | 146 | 0.361 |
147 | 147 | 0.0418 |
148 | 148 | 0.259 |
149 | 149 | 0.216 |
15 | 15 | 0.456 |
150 | 150 | 0.828 |
151 | 151 | 0.496 |
152 | 152 | 0.917 |
153 | 153 | 0.404 |
154 | 154 | 0.0813 |
155 | 155 | 0.0925 |
156 | 156 | 0.909 |
157 | 157 | 0.726 |
158 | 158 | 0.0109 |
159 | 159 | 0.881 |
16 | 16 | 0.229 |
160 | 160 | 0.0671 |
161 | 161 | 0.676 |
162 | 162 | 0.0589 |
163 | 163 | 0.651 |
164 | 164 | 0.055 |
165 | 165 | 0.866 |
166 | 166 | 0.544 |
167 | 167 | 0.121 |
168 | 168 | 0.41 |
169 | 169 | 0.282 |
17 | 17 | 0.548 |
18 | 18 | 0.762 |
19 | 19 | 0.0616 |
2 | 2 | 0.188 |
20 | 20 | 0.142 |
21 | 21 | 0.999 |
22 | 22 | 0.146 |
23 | 23 | 0.732 |
24 | 24 | 0.379 |
25 | 25 | 0.238 |
26 | 26 | 0.996 |
27 | 27 | 0.461 |
28 | 28 | 0.308 |
29 | 29 | 0.0953 |
3 | 3 | 0.588 |
30 | 30 | 0.0358 |
31 | 31 | 0.564 |
32 | 32 | 0.0373 |
33 | 33 | 0.593 |
34 | 34 | 0.251 |
35 | 35 | 0.342 |
36 | 36 | 0.187 |
37 | 37 | 0.359 |
38 | 38 | 0.598 |
39 | 39 | 0.509 |
4 | 4 | 0.8 |
40 | 40 | 0.803 |
41 | 41 | 0.237 |
42 | 42 | 0.4 |
43 | 43 | 0.618 |
44 | 44 | 0.605 |
45 | 45 | 0.101 |
46 | 46 | 0.912 |
47 | 47 | 0.763 |
48 | 48 | 0.941 |
49 | 49 | 0.185 |
5 | 5 | 0.832 |
50 | 50 | 0.435 |
51 | 51 | 0.977 |
52 | 52 | 0.958 |
53 | 53 | 0.243 |
54 | 54 | 0.945 |
55 | 55 | 0.847 |
56 | 56 | 0.726 |
57 | 57 | 0.977 |
58 | 58 | 0.21 |
59 | 59 | 0.219 |
6 | 6 | 0.909 |
60 | 60 | 0.607 |
61 | 61 | 0.282 |
62 | 62 | 0.369 |
63 | 63 | 0.827 |
64 | 64 | 0.986 |
65 | 65 | 0.534 |
66 | 66 | 0.318 |
67 | 67 | 0.475 |
68 | 68 | 0.851 |
69 | 69 | 0.873 |
7 | 7 | 0.842 |
70 | 70 | 0.2 |
71 | 71 | 0.265 |
72 | 72 | 0.594 |
73 | 73 | 0.498 |
74 | 74 | 0.545 |
75 | 75 | 0.0558 |
76 | 76 | 0.0946 |
77 | 77 | 0.00272 |
78 | 78 | 0.724 |
79 | 79 | 0.586 |
8 | 8 | 0.302 |
80 | 80 | 0.173 |
81 | 81 | 0.906 |
82 | 82 | 0.667 |
83 | 83 | 0.782 |
84 | 84 | 0.115 |
85 | 85 | 0.665 |
86 | 86 | 0.0384 |
87 | 87 | 0.957 |
88 | 88 | 0.947 |
89 | 89 | 0.00157 |
9 | 9 | 0.579 |
90 | 90 | 0.664 |
91 | 91 | 0.791 |
92 | 92 | 0.909 |
93 | 93 | 0.958 |
94 | 94 | 0.325 |
95 | 95 | 0.203 |
96 | 96 | 0.792 |
97 | 97 | 0.214 |
98 | 98 | 0.529 |
99 | 99 | 8.09635e-6 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11956
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000034 (stem cell)
0002032 (hematopoietic oligopotent progenitor cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002420 (immature T cell)
0002419 (mature T cell)
0000790 (immature alpha-beta T cell)
0000838 (lymphoid lineage restricted progenitor cell)
0002031 (hematopoietic lineage restricted progenitor cell)
0000827 (pro-T cell)
0000037 (hematopoietic stem cell)
0000566 (angioblastic mesenchymal cell)
0000625 (CD8-positive, alpha-beta T cell)
0000837 (hematopoietic multipotent progenitor cell)
0000051 (common lymphoid progenitor)
UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
NA
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
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