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MacroAPE 1083:7-GCAGAYTK: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1.508;1.508;1503.476;1.508!2;1.508;1067.664;437.32;1.508!3;844.48;140.244;1.508;521.768!4;1.508;1.508;886.704;618.28!5;686.14;174.928;265.40...")
 
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464-106H5;0.0464802!10827-111C8;0.0256205!10789-110H6;0.00434045!10828-111C9;0.0337204!10788-110H5;0.0130162!10792-110H9;0.000921748!10765-110E9;0.0236484!10829-111D1;0.0223443!10830-111D2;0.00355645!10831-111D3;0.02952!10832-111D4;0.019305!10833-111D5;0.0250021!10764-110E8;0.0182166!10770-110F5;0.0415831!10399-106A3;0.00470743!10400-106A4;0.0364687!10405-106A9;0.0169703!10834-111D6;0.0352338!10835-111D7;0.030384!10836-111D8;0.000218131!10837-111D9;0.430339!10699-109G6;0.00737061!10802-111A1;0.0600006!10796-110I4;0.0456421!10010-101C1;0.00942606!10810-111A9;0.037997!10421-106C7;0.159476!10708-109H6;0.229463!12235-129G3;0.0113139!12236-129G4;0.113878!12237-129G5;0.522261!10167-103B5;0.0596057!10151-102I7;0.000145557!10428-106D5;6.19658e-05!10795-110I3;0.602332!10805-111A4;0.000929132!10052-101G7;0.0788657!10189-103D9;0.0128764!10589-108D4;0.0512646!10425-106D2;0.0232546!10427-106D4;0.045353!10702-109G9;0.0161682!10432-106D9;0.848836!10496-107C1;0.0715471!10718-109I7;0.0233204!10011-101C2;0.0292812!10053-101G8;0.00733986!10686-109F2;0.160353!10084-102B3;0.905305!10012-101C3;2.05038e-05!10085-102B4;0.000140406!10482-107A5;0.00160532!10419-106C5;0.0521689!10080-102A8;0.095589!10760-110E4;0.00988378!10709-109H7;0.0769182!10710-109H8;0.00191358!10703-109H1;0.160244!10719-109I8;0.423985!10642-109A3;0.991108!10177-103C6;0.639393!10164-103B2;0.000321716!10173-103C2;4.86032e-05!10166-103B4;0.0110514!10083-102B2;0.00254894!10188-103D8;0.00501872!10552-107I3;0.000481371!10553-107I4;0.00211903!10013-101C4;0.351213!10536-107G5;0.00013644!10618-108G6;0.383389!10423-106C9;0.171977!10785-110H2;0.200866!12238-129G6;0.121396!12239-129G7;0.757141!12240-129G8;0.0283296!10416-106C2;0.866481!10801-110I9;0.08893!10766-110F1;0.000976863!10824-111C5;0.0140238!10825-111C6;0.00115512!10826-111C7;0.000725694!10454-106G4;0.000498872!10409-106B4;0.00415031!10638-108I8;0.00539521!10636-108I6;0.00529782!10513-107D9;0.134316!10420-106C6;0.132136!10082-102B1;0.00203215!10014-101C5;0.134967!10070-101I7;0.0393519!10452-106G2;0.0342976!10453-106G3;0.363477!10449-106F8;0.113497!10042-101F6;0.155137!10069-101I6;0.000160993!10193-103E4;0.0139073!10631-108I1;7.37128e-05!10438-106E6;0.0205771!10488-107B2;0.0932589!10196-103E7;0.00660988!10071-101I8;0.00783697!10071-101I8;0.0367356!10041-101F5;0.00287093!10451-106G1;0.00161658!10450-106F9;0.302216!10604-108F1;0.382165!10605-108F2;0.169769!10606-108F3;0.0160975!10603-108E9;0.191562!10497-107C2;0.211319!10448-106F7;0.0197875!10643-109A4;0.0547473!10426-106D3;0.0713944!10431-106D8;0.313057!10197-103E8;0.13448!10443-106F2;0.00646725!10815-111B5;0.0499546!10816-111B6;0.0228875!10817-111B7;0.0261476!10015-101C6;0.0199156!10410-106B5;0.00990724!10054-101G9;0.0881005!10758-110E2;0.00203533!10711-109H9;0.00536543!10040-101F4;0.0376638!10470-106I2;0.000251491!10415-106C1;0.27217!10198-103E9;0.0369819!10614-108G2;0.000992692!10612-108F9;0.113119!10549-107H9;0.0580502!10615-108G3;0.337336!10487-107B1;0.108777!10433-106E1;0.00308271!10688-109F4;0.043349!10444-106F3;0.0529194!10444-106F3;0.772412!10485-107A8;0.7569!10413-106B8;0.385327!10175-103C4;0.782263!10161-103A8;0.000223267!12131-128D7;4.85141e-05!10624-108H3;0.117789!10712-109I1;0.611967!10205-103F7;0.19744!10206-103F8;0.00375!10207-103F9;0.00611087!10050-101G5;0.0152129!10051-101G6;0.579919!10016-101C7;0.18133!10046-101G1;0.223309!10778-110G4;0.0333118!10633-108I3;0.480737!10818-111B8;0.0842225!10819-111B9;0.00156623!10820-111C1;0.00203302!10484-107A7;0.00211344!10808-111A7;0.0523492!10169-103B7;0.105693!10153-102I9;0.000653612!13425-144D5;0.000125869!13433-144E4;0.21982!13437-144E8;0.108106!11904-125F5;0.166032!11905-125F6;0.0119425!10039-101F3;0.00896391!10791-110H8;0.000227542!10017-101C8;0.279468!10045-101F9;0.313937!10509-107D5;0.000621457!10839-111E2;0.0186344!10692-109F8;0.0901973!10079-102A7;0.283367!10078-102A6;0.0469585!10721-110A1;0.29511!10569-108B2;0.178913!10570-108B3;0.862702!10571-108B4;0.850468!10647-109A8;0.401569!10752-110D5;0.265818!10782-110G8;0.0197248!10726-110A6;0.237389!10018-101C9;0.767565!10086-102B5;0.247251!10182-103D2;0.176166!10165-103B3;0.000163145!10499-107C4;7.12393e-05!10408-106B3;0.0614357!10019-101D1;0.293534!10068-101I5;0.0360854!10075-102A3;0.0264059!10077-102A5;0.0716679!10727-110A7;0.890889!10775-110G1;0.00583642!10412-106B7;0.0164415!12231-129F8;0.358056!12232-129F9;0.481057!12233-129G1;0.26031!12234-129G2;0.572088!10414-106B9;0.814739!10170-103B8;0.00377267!10183-103D3;5.66001e-05!10150-102I6;9.31322e-05!10174-103C3;7.54951e-05!10155-103A2;0.000669958!10038-101F2;0.000476466!10838-111E1;0.000384071!10759-110E3;0.535224!10514-107E1;0.391273!10465-106H6;0.321545!10691-109F7;0.0473821!10843-111E6;0.366496!10844-111E7;0.253938!11747-123G1;0.785125!11748-123G2;0.304001!11749-123G3;0.516171!11750-123G4;0.406333!11751-123G5;0.374198!11840-124H4;0.098994!11752-123G6;0.251358!11753-123G7;0.698157!11754-123G8;0.245693!11755-123G9;0.191923!11756-123H1;0.45257!11833-124G6;0.226076!11760-123H5;0.455852!11836-124G9;0.174936!11758-123H3;0.0477437!11835-124G8;0.688837!11762-123H7;0.0601694!11838-124H2;0.443817!11757-123H2;0.546848!11759-123H4;0.352807!11761-123H6;0.173362!11842-124H6;0.415134!11837-124H1;0.490988!10568-108B1;0.127476!13230-141I8;0.786182!13231-141I9;0.0576805!10696-109G3;0.0910241!10493-107B7;0.0453404!10494-107B8;0.0425194!10850-111F4;0.0303763!10851-111F5;0.140375!10852-111F6;0.106435!10853-111F7;0.0461801!10854-111F8;0.332069!10855-111F9;0.51151!10856-111G1;0.66307!10847-111F1;0.0517735!10846-111E9;0.702957!10848-111F2;0.308476!10845-111E8;0.392453!10857-111G2;0.0150725!10858-111G3;0.44733!10156-103A3;0.232017!11901-125F2;9.16581e-05!11902-125F3;0.00162221!11903-125F4;0.00171238!10689-109F5;0.00625445!10648-109A9;0.176878!10784-110H1;0.345786!10744-110C6;0.0284973!10772-110F7;0.0378746!10474-106I6;0.00179584!10600-108E6;0.000777661!10684-109E9;0.551135!12226-129F3;0.685266!12227-129F4;0.176913!10508-107D4;0.0297423!10539-107G8;0.714912!10607-108F4;0.182885!10555-107I6;0.754441!10774-110F9;0.338685!10637-108I7;0.338054!10663-109C6;0.657432!10728-110A8;0.516413!10729-110A9;0.301747!10430-106D7;0.469022!10730-110B1;0.013598!10813-111B3;0.801337!10812-111B2;0.444703!10037-101F1;0.231096!10172-103C1;0.000276203!10163-103B1;0.00010027!10076-102A4;5.89322e-05!10073-102A1;5.37681e-05!10036-101E9;0.00195363!10195-103E6;0.000105164!10277-104E7;0.000121069!10434-106E2;0.000186314!10550-107I1;0.172374!10545-107H5;0.0377958!10544-107H4;0.530543!10704-109H2;0.0383447!10510-107D6;0.622139!10558-107I9;0.596601!10020-101D2;0.464424!10732-110B3;0.00684825!10049-101G4;0.407813!10698-109G5;0.211768!10437-106E5;0.123822!10417-106C3;0.3065!10035-101E8;0.0347141!10171-103B9;0.000214074!10157-103A4;6.75986e-05!10034-101E7;6.97689e-05!10072-101I9;0.000180121!10199-103F1;0.00347844!10200-103F2;0.641351!10697-109G4;0.0083833!10723-110A3;0.319517!10179-103C8;0.222962!10160-103A7;0.00526201!10180-103C9;0.00417565!10162-103A9;0.0429275!10021-101D3;0.0329547!10840-111E3;0.0510821!10706-109H4;0.00240776!10033-101E6;0.834816!10032-101E5;0.000409017!10490-107B4;0.000183014!10439-106E7;0.00550744!10022-101D4;0.164952!10176-103C5;0.00119037!10469-106I1;0.000182005!10067-101I4;0.0165307!10411-106B6;0.00110296!10471-106I3;0.0113901!10030-101E3;0.0838829!10475-106I7;0.00172861!10787-110H4;0.238863!10477-106I9;0.241457!10695-109G2;0.939926!11771-123I7;0.205799!11772-123I8;0.874123!11773-123I9;0.69113!10093-102C3;0.839686!10442-106F1;0.936998!10442-106F1;0.0238828!10201-103F3;0.0863429!10639-108I9;0.00360025!11843-124H7;0.0209694!11841-124H5;0.0360786!10693-109F9;0.196969!10436-106E4;0.0802908!10483-107A6;0.0935711!10282-104F3;0.095082!10023-101D5;0.226709!10066-101I3;0.125927!10065-101I2;0.00834293!10800-110I8;0.000303619!10610-108F7;0.440219!10841-111E4;0.286864!10541-107H1;0.456946!10842-111E5;0.121802!10562-108A4;0.373058!10024-101D6;0.897225!10064-101I1;0.252769!10609-108F6;0.0533681!10048-101G3;0.242856!10781-110G7;0.00526729!10181-103D1;0.390278!10159-103A6;0.000193732!10056-101H2;0.0018309!10737-110B8;0.00016437!10025-101D7;0.352142!10044-101F8;0.128123!10424-106D1;0.0254844!10463-106H4;0.000568564!10616-108G4;0.01848!10486-107A9;0.449037!10062-101H8;0.0476855!10202-103F4;0.00559899!10158-103A5;0.570473!10441-106E9;0.00142871!10031-101E4;0.638491!10063-101H9;0.000178367!10063-101H9;0.0015737!11763-123H8;0.024217!11765-123I1;0.081952!11768-123I4;0.0639486!10807-111A6;0.23509!10790-110H7;0.207425!10798-110I6;0.469335!10786-110H3;0.749686!10591-108D6;0.414703!10593-108D8;0.343514!10590-108D5;0.732207!10026-101D8;0.227954!10096-102C6;0.0588987!10168-103B6;0.804011!10154-103A1;0.000155233!10209-103G2;4.27463e-05!10061-101H7;0.0687535!10027-101D9;0.00202207!10043-101F7;0.866954!10783-110G9;0.312135!10028-101E1;0.5314!10060-101H6;0.463547!10203-103F5;0.0410719!10059-101H5;0.0226709!10047-101G2;0.00448813!10029-101E2;0.656097!10058-101H4;0.192756!10418-106C4;0.00346569!10492-107B6;0.480696!10694-109G1;0.0826371!10797-110I5;0.462825!10057-101H3;0.179256!10100-102D1;0.0713589!10055-101H1;0.00170454!10204-103F6;0.000326611!10191-103E2;0.00640425!10563-108A5;0.0104459
|name=7-GCAGAYTK,BestGuess:MA0117.1_Mafb(0.616094564274995),T:1508.0(37.11%),B:12694.4(28.81%),P:1e-27
|name=7-GCAGAYTK,BestGuess:MA0117.1_Mafb(0.616094564274995),T:1508.0(37.11%),B:12694.4(28.81%),P:1e-27
|tomtom_result=Mafb#MA0117.1;0;0.00676985;3.22245;1;8;GCAGATTT;GCTGACGG;+!DAL82#MA0291.1;2;0.0068495;3.26036;1;7;GCAGATTT;GCGCACATT;-!Gfi#MA0038.1;1;0.0160172;7.62417;1;8;GCAGATTT;CAGTGATTTG;-!SMP1#MA0383.1;1;0.0162443;7.7323;1;8;GCAGATTT;TGCTAATTTAATTATAGGTAA;-
}}
}}

Latest revision as of 14:12, 7 September 2012

Full Name: 7-GCAGAYTK,BestGuess:MA0117.1_Mafb(0.616094564274995),T:1508.0(37.11%),B:12694.4(28.81%),P:1e-27

Motif matrix
POACGT
11.5081.5081503.4761.508
21.5081067.664437.321.508
3844.48140.2441.508521.768
41.5081.508886.704618.28
5686.14174.928265.408381.524
61.508698.2041.508806.78
71.5081.5081.5081503.476
81.5081.508680.108824.876

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Mafb#MA0117.100.006769853.2224518GCAGATTTGCTGACGG+
DAL82#MA0291.120.00684953.2603617GCAGATTTGCGCACATT-
Gfi#MA0038.110.01601727.6241718GCAGATTTCAGTGATTTG-
SMP1#MA0383.110.01624437.732318GCAGATTTTGCTAATTTAATTATAGGTAA-
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