FFCP PHASE1:Mm9::chr3:121948394..121948468,+: Difference between revisions
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|id=chr3:121948394..121948468,+ | |id=chr3:121948394..121948468,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.88e-13!23;CL:0000337!6.88e-13!23;CL:0002319!3.20e-11!43;CL:0000221!3.52e-11!44;CL:0000133!3.52e-11!44;CL:0000540!7.86e-11!33;CL:0000047!7.86e-11!33;CL:0000031!7.86e-11!33;CL:0000404!7.86e-11!33;CL:0000055!7.71e-09!50;CL:0000393!1.96e-08!39;CL:0000211!1.96e-08!39 | |ontology_enrichment_celltype=CL:0000117!6.88e-13!23;CL:0000337!6.88e-13!23;CL:0002319!3.20e-11!43;CL:0000221!3.52e-11!44;CL:0000133!3.52e-11!44;CL:0000540!7.86e-11!33;CL:0000047!7.86e-11!33;CL:0000031!7.86e-11!33;CL:0000404!7.86e-11!33;CL:0000055!7.71e-09!50;CL:0000393!1.96e-08!39;CL:0000211!1.96e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.74e-13,23;CL:0000337,6.74e-13,23;CL:0002319,3.14e-11,43;CL:0000221,3.45e-11,44;CL:0000133,3.45e-11,44;CL:0000540,7.72e-11,33;CL:0000047,7.72e-11,33;CL:0000031,7.72e-11,33;CL:0000404,7.72e-11,33;CL:0000393,1.94e-08,39;CL:0000211,1.94e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.06e-26!73;UBERON:0005743!3.06e-26!73;UBERON:0000073!2.91e-24!75;UBERON:0001016!2.91e-24!75;UBERON:0001049!7.83e-23!52;UBERON:0005068!7.83e-23!52;UBERON:0006241!7.83e-23!52;UBERON:0007135!7.83e-23!52;UBERON:0000955!1.52e-22!50;UBERON:0006238!1.52e-22!50;UBERON:0002616!4.02e-22!49;UBERON:0004121!2.20e-21!102;UBERON:0000924!2.20e-21!102;UBERON:0006601!2.20e-21!102;UBERON:0002346!4.08e-20!71;UBERON:0003075!4.08e-20!71;UBERON:0007284!4.08e-20!71;UBERON:0000033!4.84e-20!63;UBERON:0007811!5.48e-18!86;UBERON:0000153!1.49e-17!94;UBERON:0002020!3.11e-17!34;UBERON:0003080!1.61e-16!40;UBERON:0002780!6.06e-16!39;UBERON:0001890!6.06e-16!39;UBERON:0006240!6.06e-16!39;UBERON:0003056!1.58e-15!49;UBERON:0002791!3.49e-15!29;UBERON:0003528!3.49e-15!29;UBERON:0001893!3.49e-15!29;UBERON:0000956!1.46e-10!21;UBERON:0001869!1.46e-10!21;UBERON:0000203!1.46e-10!21;UBERON:0002619!9.84e-09!17;UBERON:0000025!1.32e-08!114;UBERON:0004111!1.45e-07!122;UBERON:0000475!5.01e-07!200;UBERON:0003076!5.35e-07!12;UBERON:0003057!5.35e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!3.06e-26!73;UBERON:0005743!3.06e-26!73;UBERON:0000073!2.91e-24!75;UBERON:0001016!2.91e-24!75;UBERON:0001049!7.83e-23!52;UBERON:0005068!7.83e-23!52;UBERON:0006241!7.83e-23!52;UBERON:0007135!7.83e-23!52;UBERON:0000955!1.52e-22!50;UBERON:0006238!1.52e-22!50;UBERON:0002616!4.02e-22!49;UBERON:0004121!2.20e-21!102;UBERON:0000924!2.20e-21!102;UBERON:0006601!2.20e-21!102;UBERON:0002346!4.08e-20!71;UBERON:0003075!4.08e-20!71;UBERON:0007284!4.08e-20!71;UBERON:0000033!4.84e-20!63;UBERON:0007811!5.48e-18!86;UBERON:0000153!1.49e-17!94;UBERON:0002020!3.11e-17!34;UBERON:0003080!1.61e-16!40;UBERON:0002780!6.06e-16!39;UBERON:0001890!6.06e-16!39;UBERON:0006240!6.06e-16!39;UBERON:0003056!1.58e-15!49;UBERON:0002791!3.49e-15!29;UBERON:0003528!3.49e-15!29;UBERON:0001893!3.49e-15!29;UBERON:0000956!1.46e-10!21;UBERON:0001869!1.46e-10!21;UBERON:0000203!1.46e-10!21;UBERON:0002619!9.84e-09!17;UBERON:0000025!1.32e-08!114;UBERON:0004111!1.45e-07!122;UBERON:0000475!5.01e-07!200;UBERON:0003076!5.35e-07!12;UBERON:0003057!5.35e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.92e-26,73;UBERON:0000073,1.99e-24,54;UBERON:0001016,2.79e-24,75;UBERON:0001049,7.52e-23,52;UBERON:0005068,7.52e-23,52;UBERON:0006241,7.52e-23,52;UBERON:0007135,7.52e-23,52;UBERON:0004121,7.72e-23,95;UBERON:0000924,7.72e-23,95;UBERON:0006601,7.72e-23,95;UBERON:0002346,2.91e-22,64;UBERON:0003075,2.91e-22,64;UBERON:0007284,2.91e-22,64;UBERON:0010371,7.08e-22,73;UBERON:0000955,2.12e-20,47;UBERON:0006238,2.12e-20,47;UBERON:0002616,5.48e-20,46;UBERON:0002020,3.02e-17,34;UBERON:0003080,1.57e-16,40;UBERON:0010314,2.73e-16,92;UBERON:0002780,5.90e-16,39;UBERON:0001890,5.90e-16,39;UBERON:0006240,5.90e-16,39;UBERON:0003056,1.54e-15,49;UBERON:0003528,3.40e-15,29;UBERON:0002791,3.40e-15,29;UBERON:0001893,3.40e-15,29;UBERON:0000956,1.44e-10,21;UBERON:0001869,1.44e-10,21;UBERON:0000203,1.44e-10,21;UBERON:0002619,9.70e-09,17;UBERON:0000025,1.21e-08,114;UBERON:0004111,1.34e-07,122;UBERON:0003076,5.30e-07,12;UBERON:0003057,5.30e-07,12 | |||
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| ||
|short_description=p3@Gclm | |short_description=p3@Gclm | ||
}} | }} |
Revision as of 19:57, 14 November 2012
Short description: | p3@Gclm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gclm_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -6bp_to_ENSMUST00000029769_5end |
EntrezGene: | Gclm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.74e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.74e-13 | 23 |
neural cell | 3.14e-11 | 43 |
ectodermal cell | 3.45e-11 | 44 |
neurectodermal cell | 3.45e-11 | 44 |
neuron | 7.72e-11 | 33 |
neuronal stem cell | 7.72e-11 | 33 |
neuroblast | 7.72e-11 | 33 |
electrically signaling cell | 7.72e-11 | 33 |
electrically responsive cell | 1.94e-08 | 39 |
electrically active cell | 1.94e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.