FFCP PHASE1:Mm9::chr3:80606526..80606539,-: Difference between revisions
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|id=chr3:80606526..80606539,- | |id=chr3:80606526..80606539,- | ||
|ontology_enrichment_celltype=CL:0000540!1.44e-14!33;CL:0000047!1.44e-14!33;CL:0000031!1.44e-14!33;CL:0000404!1.44e-14!33;CL:0000117!4.50e-13!23;CL:0000337!4.50e-13!23;CL:0000221!3.25e-12!44;CL:0000133!3.25e-12!44;CL:0002319!4.50e-12!43;CL:0000393!2.72e-10!39;CL:0000211!2.72e-10!39;CL:0000055!1.87e-08!50 | |ontology_enrichment_celltype=CL:0000540!1.44e-14!33;CL:0000047!1.44e-14!33;CL:0000031!1.44e-14!33;CL:0000404!1.44e-14!33;CL:0000117!4.50e-13!23;CL:0000337!4.50e-13!23;CL:0000221!3.25e-12!44;CL:0000133!3.25e-12!44;CL:0002319!4.50e-12!43;CL:0000393!2.72e-10!39;CL:0000211!2.72e-10!39;CL:0000055!1.87e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.53e-17,23;CL:0000337,1.53e-17,23;CL:0000540,8.65e-16,33;CL:0000047,8.65e-16,33;CL:0000031,8.65e-16,33;CL:0000404,8.65e-16,33;CL:0000393,5.32e-12,39;CL:0000211,5.32e-12,39;CL:0002319,4.22e-10,43;CL:0000221,1.10e-09,44;CL:0000133,1.10e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.04e-32!102;UBERON:0000924!4.04e-32!102;UBERON:0006601!4.04e-32!102;UBERON:0001017!1.24e-31!73;UBERON:0005743!1.24e-31!73;UBERON:0000073!1.59e-31!75;UBERON:0001016!1.59e-31!75;UBERON:0002346!1.04e-30!71;UBERON:0003075!1.04e-30!71;UBERON:0007284!1.04e-30!71;UBERON:0001049!3.17e-26!52;UBERON:0005068!3.17e-26!52;UBERON:0006241!3.17e-26!52;UBERON:0007135!3.17e-26!52;UBERON:0000033!4.42e-25!63;UBERON:0000955!6.98e-25!50;UBERON:0006238!6.98e-25!50;UBERON:0002616!4.65e-24!49;UBERON:0003056!2.98e-22!49;UBERON:0002020!1.75e-20!34;UBERON:0003080!8.55e-20!40;UBERON:0002780!4.87e-19!39;UBERON:0001890!4.87e-19!39;UBERON:0006240!4.87e-19!39;UBERON:0002791!4.35e-17!29;UBERON:0003528!4.35e-17!29;UBERON:0001893!4.35e-17!29;UBERON:0007811!2.50e-12!86;UBERON:0000956!3.33e-12!21;UBERON:0001869!3.33e-12!21;UBERON:0000203!3.33e-12!21;UBERON:0000153!2.18e-10!94;UBERON:0002619!2.89e-10!17;UBERON:0002021!2.52e-09!10;UBERON:0000411!2.52e-09!10;UBERON:0001950!2.52e-09!10;UBERON:0003076!5.92e-07!12;UBERON:0003057!5.92e-07!12 | |ontology_enrichment_uberon=UBERON:0004121!4.04e-32!102;UBERON:0000924!4.04e-32!102;UBERON:0006601!4.04e-32!102;UBERON:0001017!1.24e-31!73;UBERON:0005743!1.24e-31!73;UBERON:0000073!1.59e-31!75;UBERON:0001016!1.59e-31!75;UBERON:0002346!1.04e-30!71;UBERON:0003075!1.04e-30!71;UBERON:0007284!1.04e-30!71;UBERON:0001049!3.17e-26!52;UBERON:0005068!3.17e-26!52;UBERON:0006241!3.17e-26!52;UBERON:0007135!3.17e-26!52;UBERON:0000033!4.42e-25!63;UBERON:0000955!6.98e-25!50;UBERON:0006238!6.98e-25!50;UBERON:0002616!4.65e-24!49;UBERON:0003056!2.98e-22!49;UBERON:0002020!1.75e-20!34;UBERON:0003080!8.55e-20!40;UBERON:0002780!4.87e-19!39;UBERON:0001890!4.87e-19!39;UBERON:0006240!4.87e-19!39;UBERON:0002791!4.35e-17!29;UBERON:0003528!4.35e-17!29;UBERON:0001893!4.35e-17!29;UBERON:0007811!2.50e-12!86;UBERON:0000956!3.33e-12!21;UBERON:0001869!3.33e-12!21;UBERON:0000203!3.33e-12!21;UBERON:0000153!2.18e-10!94;UBERON:0002619!2.89e-10!17;UBERON:0002021!2.52e-09!10;UBERON:0000411!2.52e-09!10;UBERON:0001950!2.52e-09!10;UBERON:0003076!5.92e-07!12;UBERON:0003057!5.92e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.59e-33,73;UBERON:0000073,2.89e-33,54;UBERON:0001016,4.14e-32,75;UBERON:0002346,2.14e-31,64;UBERON:0003075,2.14e-31,64;UBERON:0007284,2.14e-31,64;UBERON:0001049,2.59e-31,52;UBERON:0005068,2.59e-31,52;UBERON:0006241,2.59e-31,52;UBERON:0007135,2.59e-31,52;UBERON:0002020,6.64e-27,34;UBERON:0000955,1.30e-26,47;UBERON:0006238,1.30e-26,47;UBERON:0004121,1.71e-26,95;UBERON:0000924,1.71e-26,95;UBERON:0006601,1.71e-26,95;UBERON:0002616,1.55e-25,46;UBERON:0010371,2.44e-25,73;UBERON:0003080,2.59e-23,40;UBERON:0003056,7.61e-23,49;UBERON:0002780,2.67e-22,39;UBERON:0001890,2.67e-22,39;UBERON:0006240,2.67e-22,39;UBERON:0003528,3.33e-22,29;UBERON:0002791,3.33e-22,29;UBERON:0001893,3.33e-22,29;UBERON:0010314,3.33e-18,92;UBERON:0000956,1.88e-15,21;UBERON:0001869,1.88e-15,21;UBERON:0000203,1.88e-15,21;UBERON:0002619,9.21e-13,17;UBERON:0002021,2.44e-12,10;UBERON:0000411,2.44e-12,10;UBERON:0001950,2.44e-12,10;UBERON:0003076,2.70e-08,12;UBERON:0003057,2.70e-08,12;UBERON:0002420,6.45e-08,8;UBERON:0007245,6.45e-08,8;UBERON:0010009,6.45e-08,8;UBERON:0010011,6.45e-08,8;UBERON:0000454,6.45e-08,8;UBERON:0002240,8.73e-07,6;UBERON:0005174,8.73e-07,6;UBERON:0001137,8.73e-07,6 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.58328969722285,0,0,0,0,0,0,0,0,2.02316460859598,4.23192783417626,3.1691570175309,0,0,0,0,0,0.299600110518405,0.768436610643109,2.7996195323289,2.16009501330705,2.52389953621658,7.42692559449889,7.50953039235486,2.20483438586917,1.72521847832825,1.83843757322004,8.8092704799511,14.5563565417114,13.9781945263182,3.42904348098504,4.48289453651807,3.64639359389732,5.862842979029,12.380777420697,12.071061574368,14.7314292736834,19.7896636310753,6.33758115806022,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,0,2.07818994690755,0,0.608930956624282,0.461230994512117,0.60289056221049,1.64624189989987,0.376999773989026,0,0.144599356919912,0,0,0,0,0,27.5213949190854,27.4375185925626,0,0,0,0,27.2618963716777,17.3850229071078,6.28271760564322,45.5419718903764,43.2159122888259,21.1943805450751,27.0942909323155,0.101839363850316,0.248813941220186,0.758168275301024,1.68353484709179,0.260240885925407,0.689706313300419,0.360124259610698,0.90422890701429,2.04109497453984,2.3060469651273,2.15513966487376,4.39795730256327,0,0.189106080167819,0.527853372491847,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.5255283754928,10.0846520131699,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,10.1146871692309,17.1129062424617,0,0,0.94652465824877,1.56175497718655,3.87762115919038,0.238968797952552,0.668396022247182,1.69845918473299,0.809621403349789,2.33804686329049,4.34816555741176,32.1321316421807,0,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,2.7235168460303,0.36012218806262,0,0.428674070063185,2.12808280370728,2.31879462882692,1.81003922662333,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,14.8340241608408,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,37.2736216127264,37.7466693935885,32.6550442660456,31.1054260042075,34.2541259885321,33.2373314851468,33.0761025113585,36.9263386643861,34.8919654917838,31.583379016861,0.415149390336707,1.99512436700516,1.36586884603307,0.729320151204882,0.419226325255965,1.47074806760011,2.889207461421,3.5025959730612,1.92551525755089,3.53776096469316,3.29523089857312,4.14977951049368,3.55837728385553,3.26528277264833,2.98664438569189,1.42888107384922,1.39061191133827,3.27945674788299,4.12085900803307,3.38557516309114,3.42869252385415,2.30718548007139,4.05341522910446,2.32554266611726,2.35273451038327,2.876896668317,2.92684756596436,2.10455769150274,1.90125759384206,3.36685362994643,1.66089025373844,3.84167481264697,2.04615521584845,2.32405261778949,2.50778594275484,2.74791635731741,0.935726433781634,1.93383948643468,1.53030665655075,0.441182838239031,0.927471342481686 | ||
|short_description=p4@Gria2 | |short_description=p4@Gria2 | ||
}} | }} |
Revision as of 23:51, 14 November 2012
Short description: | p4@Gria2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gria2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 173bp_to_ENSMUST00000075316, ENSMUST00000107745, ENSMUST00000107746, NM_001039195, NM_001083806, NM_013540, uc008poa.1, uc008pob.1, uc008poc.1, uc008pod.1, uc008poe.1_5end |
EntrezGene: | Gria2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.53e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.53e-17 | 23 |
neuron | 8.65e-16 | 33 |
neuronal stem cell | 8.65e-16 | 33 |
neuroblast | 8.65e-16 | 33 |
electrically signaling cell | 8.65e-16 | 33 |
electrically responsive cell | 5.32e-12 | 39 |
electrically active cell | 5.32e-12 | 39 |
neural cell | 4.22e-10 | 43 |
ectodermal cell | 1.10e-09 | 44 |
neurectodermal cell | 1.10e-09 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.