FFCP PHASE1:Mm9::chr14:9211335..9211360,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr14:9211335..9211360,- | |id=chr14:9211335..9211360,- | ||
|ontology_enrichment_celltype=CL:0002563!3.01e-09!9;CL:0002251!3.01e-09!9;CL:0002076!4.40e-08!15;CL:0000239!6.04e-07!6;CL:0000677!6.04e-07!6;CL:0000212!6.04e-07!6;CL:0000584!6.04e-07!6 | |ontology_enrichment_celltype=CL:0002563!3.01e-09!9;CL:0002251!3.01e-09!9;CL:0002076!4.40e-08!15;CL:0000239!6.04e-07!6;CL:0000677!6.04e-07!6;CL:0000212!6.04e-07!6;CL:0000584!6.04e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.04e-15,9;CL:0002251,2.04e-15,9;CL:0002076,2.57e-12,15;CL:0000239,2.80e-11,6;CL:0000677,2.80e-11,6;CL:0000584,2.80e-11,6;CL:0000066,5.18e-11,25;CL:0000075,1.53e-09,7;CL:0000223,1.25e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.90e-15!59;UBERON:0000344!9.64e-15!15;UBERON:0001242!6.75e-13!13;UBERON:0000060!6.75e-13!13;UBERON:0001262!6.75e-13!13;UBERON:0004786!6.75e-13!13;UBERON:0000160!6.98e-13!43;UBERON:0004119!5.57e-11!130;UBERON:0000925!5.57e-11!130;UBERON:0006595!5.57e-11!130;UBERON:0001007!7.46e-11!128;UBERON:0001555!7.46e-11!128;UBERON:0007026!7.46e-11!128;UBERON:0004921!9.56e-10!126;UBERON:0004185!9.56e-10!126;UBERON:0003350!3.01e-09!9;UBERON:0004808!3.01e-09!9;UBERON:0001277!3.01e-09!9;UBERON:0004923!4.17e-08!24;UBERON:0000485!4.78e-07!11 | |ontology_enrichment_uberon=UBERON:0005409!2.90e-15!59;UBERON:0000344!9.64e-15!15;UBERON:0001242!6.75e-13!13;UBERON:0000060!6.75e-13!13;UBERON:0001262!6.75e-13!13;UBERON:0004786!6.75e-13!13;UBERON:0000160!6.98e-13!43;UBERON:0004119!5.57e-11!130;UBERON:0000925!5.57e-11!130;UBERON:0006595!5.57e-11!130;UBERON:0001007!7.46e-11!128;UBERON:0001555!7.46e-11!128;UBERON:0007026!7.46e-11!128;UBERON:0004921!9.56e-10!126;UBERON:0004185!9.56e-10!126;UBERON:0003350!3.01e-09!9;UBERON:0004808!3.01e-09!9;UBERON:0001277!3.01e-09!9;UBERON:0004923!4.17e-08!24;UBERON:0000485!4.78e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.85e-35,31;UBERON:0005409,7.34e-34,47;UBERON:0000344,2.43e-25,15;UBERON:0001242,5.28e-22,13;UBERON:0001262,5.28e-22,13;UBERON:0004786,5.28e-22,13;UBERON:0001007,5.93e-17,116;UBERON:0001555,5.93e-17,116;UBERON:0007026,5.93e-17,116;UBERON:0004119,1.69e-16,118;UBERON:0000925,1.69e-16,118;UBERON:0006595,1.69e-16,118;UBERON:0003350,2.04e-15,9;UBERON:0004808,2.04e-15,9;UBERON:0001277,2.04e-15,9;UBERON:0004921,5.23e-15,114;UBERON:0004923,2.39e-14,24;UBERON:0000485,2.89e-12,11;UBERON:0007023,6.01e-07,51 | |||
|phase1_expression=0,7.67745896806594,8.64498554840118,8.46899791659124,9.01612313903425,1.6787927191189,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,4.47978783821539,4.81759490241057,5.16808767703518,3.87685796543167,2.58565479223067,3.99049180858385,2.52030129759931,5.76499327703792,0,0,0,2.88851619751275,2.49351968037739,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0.865964164044856,1.01343946190039,1.51657333504435,2.74041311325744,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,57.7814459776179,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7289468174932,8.19796756656987,0,0,0.257734922644187,0,1.33426826306922,1.33157938278791,3.79623249235609,1.64698954724011,4.52403375840485,4.77495532898762,4.28920991662064,3.59527763461689,36.3111923789486,32.2608862672075,0,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,38.3719412615634,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,11.4560474161814,0,0.203319467126849,0.540026704109006,1.46361807210128,1.74690050996942,1.61837215661785,0.991841468704031,7.59092231753686,15.2945668484316,13.6694648879124,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.405450430580328,0,0,0,0.39736270956253,0.240390899039938,0,0,0.0762068066549998,0.100826185136841,0.38983152295901,0.192423683280659,0.116876902181569,0.453460767230423,0,0,0,4.056981474676,1.87682475451182,3.11357761254351,3.64426244434412,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0.666740183404846,0.206035057238894,0.64183841918363,0,0.760437899670719,0,0.561849044819294,0.0640251524048693,0.459483751644906,1.42888107384922,0,0,0.412085900803307,0,1.02860775715625,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0.394017929502254,0.818462086339379,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.661774257358546,0.231867835620421 | |phase1_expression=0,7.67745896806594,8.64498554840118,8.46899791659124,9.01612313903425,1.6787927191189,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,4.47978783821539,4.81759490241057,5.16808767703518,3.87685796543167,2.58565479223067,3.99049180858385,2.52030129759931,5.76499327703792,0,0,0,2.88851619751275,2.49351968037739,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0.865964164044856,1.01343946190039,1.51657333504435,2.74041311325744,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,57.7814459776179,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7289468174932,8.19796756656987,0,0,0.257734922644187,0,1.33426826306922,1.33157938278791,3.79623249235609,1.64698954724011,4.52403375840485,4.77495532898762,4.28920991662064,3.59527763461689,36.3111923789486,32.2608862672075,0,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,38.3719412615634,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,11.4560474161814,0,0.203319467126849,0.540026704109006,1.46361807210128,1.74690050996942,1.61837215661785,0.991841468704031,7.59092231753686,15.2945668484316,13.6694648879124,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.405450430580328,0,0,0,0.39736270956253,0.240390899039938,0,0,0.0762068066549998,0.100826185136841,0.38983152295901,0.192423683280659,0.116876902181569,0.453460767230423,0,0,0,4.056981474676,1.87682475451182,3.11357761254351,3.64426244434412,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0.666740183404846,0.206035057238894,0.64183841918363,0,0.760437899670719,0,0.561849044819294,0.0640251524048693,0.459483751644906,1.42888107384922,0,0,0.412085900803307,0,1.02860775715625,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0.394017929502254,0.818462086339379,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.661774257358546,0.231867835620421 | ||
|short_description=p4@Oit1 | |short_description=p4@Oit1 | ||
}} | }} |
Revision as of 00:07, 15 November 2012
Short description: | p4@Oit1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Oit1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1369 |
Association with transcript: | -58bp_to_ENSMUST00000022269, NM_146050, uc007sfd.1_5end |
EntrezGene: | Oit1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.04e-15 | 9 |
epithelial cell of alimentary canal | 2.04e-15 | 9 |
endo-epithelial cell | 2.57e-12 | 15 |
brush border epithelial cell | 2.80e-11 | 6 |
gut absorptive cell | 2.80e-11 | 6 |
enterocyte | 2.80e-11 | 6 |
epithelial cell | 5.18e-11 | 25 |
columnar/cuboidal epithelial cell | 1.53e-09 | 7 |
endodermal cell | 1.25e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.85e-35 | 31 |
gastrointestinal system | 7.34e-34 | 47 |
mucosa | 2.43e-25 | 15 |
intestinal mucosa | 5.28e-22 | 13 |
wall of intestine | 5.28e-22 | 13 |
gastrointestinal system mucosa | 5.28e-22 | 13 |
digestive system | 5.93e-17 | 116 |
digestive tract | 5.93e-17 | 116 |
primitive gut | 5.93e-17 | 116 |
endoderm-derived structure | 1.69e-16 | 118 |
endoderm | 1.69e-16 | 118 |
presumptive endoderm | 1.69e-16 | 118 |
epithelium of mucosa | 2.04e-15 | 9 |
gastrointestinal system epithelium | 2.04e-15 | 9 |
intestinal epithelium | 2.04e-15 | 9 |
subdivision of digestive tract | 5.23e-15 | 114 |
organ component layer | 2.39e-14 | 24 |
simple columnar epithelium | 2.89e-12 | 11 |
adult organism | 6.01e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.