FFCP PHASE1:Mm9::chr5:65884139..65884160,-: Difference between revisions
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|id=chr5:65884139..65884160,- | |id=chr5:65884139..65884160,- | ||
|ontology_enrichment_celltype=CL:0000117!4.35e-11!23;CL:0000337!4.35e-11!23;CL:0000221!1.80e-08!44;CL:0000133!1.80e-08!44;CL:0002319!2.01e-08!43;CL:0000055!8.01e-08!50;CL:0000540!2.40e-07!33;CL:0000047!2.40e-07!33;CL:0000031!2.40e-07!33;CL:0000404!2.40e-07!33;CL:0000723!5.17e-07!91;CL:0000048!5.17e-07!91 | |ontology_enrichment_celltype=CL:0000117!4.35e-11!23;CL:0000337!4.35e-11!23;CL:0000221!1.80e-08!44;CL:0000133!1.80e-08!44;CL:0002319!2.01e-08!43;CL:0000055!8.01e-08!50;CL:0000540!2.40e-07!33;CL:0000047!2.40e-07!33;CL:0000031!2.40e-07!33;CL:0000404!2.40e-07!33;CL:0000723!5.17e-07!91;CL:0000048!5.17e-07!91 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.35e-11,23;CL:0000337,4.35e-11,23;CL:0000221,1.80e-08,44;CL:0000133,1.80e-08,44;CL:0002319,2.01e-08,43;CL:0000540,2.40e-07,33;CL:0000047,2.40e-07,33;CL:0000031,2.40e-07,33;CL:0000404,2.40e-07,33;CL:0000723,5.05e-07,91;CL:0000048,5.05e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.80e-17!73;UBERON:0005743!5.80e-17!73;UBERON:0002020!1.26e-16!34;UBERON:0001049!1.40e-16!52;UBERON:0005068!1.40e-16!52;UBERON:0006241!1.40e-16!52;UBERON:0007135!1.40e-16!52;UBERON:0000955!1.41e-15!50;UBERON:0006238!1.41e-15!50;UBERON:0000073!2.10e-15!75;UBERON:0001016!2.10e-15!75;UBERON:0002616!4.70e-15!49;UBERON:0002791!1.20e-14!29;UBERON:0003528!1.20e-14!29;UBERON:0001893!1.20e-14!29;UBERON:0000033!2.68e-13!63;UBERON:0003080!5.30e-13!40;UBERON:0002780!7.79e-13!39;UBERON:0001890!7.79e-13!39;UBERON:0006240!7.79e-13!39;UBERON:0000956!6.72e-11!21;UBERON:0001869!6.72e-11!21;UBERON:0000203!6.72e-11!21;UBERON:0002346!1.68e-10!71;UBERON:0003075!1.68e-10!71;UBERON:0007284!1.68e-10!71;UBERON:0007811!4.04e-10!86;UBERON:0003056!4.32e-10!49;UBERON:0004121!6.12e-10!102;UBERON:0000924!6.12e-10!102;UBERON:0006601!6.12e-10!102;UBERON:0000153!3.37e-09!94;UBERON:0002619!4.66e-09!17 | |ontology_enrichment_uberon=UBERON:0001017!5.80e-17!73;UBERON:0005743!5.80e-17!73;UBERON:0002020!1.26e-16!34;UBERON:0001049!1.40e-16!52;UBERON:0005068!1.40e-16!52;UBERON:0006241!1.40e-16!52;UBERON:0007135!1.40e-16!52;UBERON:0000955!1.41e-15!50;UBERON:0006238!1.41e-15!50;UBERON:0000073!2.10e-15!75;UBERON:0001016!2.10e-15!75;UBERON:0002616!4.70e-15!49;UBERON:0002791!1.20e-14!29;UBERON:0003528!1.20e-14!29;UBERON:0001893!1.20e-14!29;UBERON:0000033!2.68e-13!63;UBERON:0003080!5.30e-13!40;UBERON:0002780!7.79e-13!39;UBERON:0001890!7.79e-13!39;UBERON:0006240!7.79e-13!39;UBERON:0000956!6.72e-11!21;UBERON:0001869!6.72e-11!21;UBERON:0000203!6.72e-11!21;UBERON:0002346!1.68e-10!71;UBERON:0003075!1.68e-10!71;UBERON:0007284!1.68e-10!71;UBERON:0007811!4.04e-10!86;UBERON:0003056!4.32e-10!49;UBERON:0004121!6.12e-10!102;UBERON:0000924!6.12e-10!102;UBERON:0006601!6.12e-10!102;UBERON:0000153!3.37e-09!94;UBERON:0002619!4.66e-09!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.89e-17,54;UBERON:0001017,5.79e-17,73;UBERON:0002020,1.25e-16,34;UBERON:0001049,1.40e-16,52;UBERON:0005068,1.40e-16,52;UBERON:0006241,1.40e-16,52;UBERON:0007135,1.40e-16,52;UBERON:0001016,2.10e-15,75;UBERON:0003528,1.20e-14,29;UBERON:0002791,1.20e-14,29;UBERON:0001893,1.20e-14,29;UBERON:0000955,1.49e-14,47;UBERON:0006238,1.49e-14,47;UBERON:0002616,4.88e-14,46;UBERON:0002346,3.94e-13,64;UBERON:0003075,3.94e-13,64;UBERON:0007284,3.94e-13,64;UBERON:0003080,5.30e-13,40;UBERON:0002780,7.78e-13,39;UBERON:0001890,7.78e-13,39;UBERON:0006240,7.78e-13,39;UBERON:0004121,7.10e-12,95;UBERON:0000924,7.10e-12,95;UBERON:0006601,7.10e-12,95;UBERON:0000956,6.71e-11,21;UBERON:0001869,6.71e-11,21;UBERON:0000203,6.71e-11,21;UBERON:0010371,1.21e-10,73;UBERON:0003056,4.32e-10,49;UBERON:0002619,4.65e-09,17;UBERON:0010314,2.81e-07,92 | |||
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| ||
|short_description=p4@1110003E01Rik | |short_description=p4@1110003E01Rik | ||
}} | }} |
Revision as of 01:30, 15 November 2012
Short description: | p4@1110003E01Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_1110003E01Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -19bp_to_ENSMUST00000144562_5end |
EntrezGene: | 1110003E01Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.35e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.35e-11 | 23 |
ectodermal cell | 1.80e-08 | 44 |
neurectodermal cell | 1.80e-08 | 44 |
neural cell | 2.01e-08 | 43 |
neuron | 2.40e-07 | 33 |
neuronal stem cell | 2.40e-07 | 33 |
neuroblast | 2.40e-07 | 33 |
electrically signaling cell | 2.40e-07 | 33 |
somatic stem cell | 5.05e-07 | 91 |
multi fate stem cell | 5.05e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.89e-17 | 54 |
central nervous system | 5.79e-17 | 73 |
gray matter | 1.25e-16 | 34 |
neural tube | 1.40e-16 | 52 |
neural rod | 1.40e-16 | 52 |
future spinal cord | 1.40e-16 | 52 |
neural keel | 1.40e-16 | 52 |
nervous system | 2.10e-15 | 75 |
brain grey matter | 1.20e-14 | 29 |
regional part of telencephalon | 1.20e-14 | 29 |
telencephalon | 1.20e-14 | 29 |
brain | 1.49e-14 | 47 |
future brain | 1.49e-14 | 47 |
regional part of brain | 4.88e-14 | 46 |
neurectoderm | 3.94e-13 | 64 |
neural plate | 3.94e-13 | 64 |
presumptive neural plate | 3.94e-13 | 64 |
anterior neural tube | 5.30e-13 | 40 |
regional part of forebrain | 7.78e-13 | 39 |
forebrain | 7.78e-13 | 39 |
future forebrain | 7.78e-13 | 39 |
ectoderm-derived structure | 7.10e-12 | 95 |
ectoderm | 7.10e-12 | 95 |
presumptive ectoderm | 7.10e-12 | 95 |
cerebral cortex | 6.71e-11 | 21 |
cerebral hemisphere | 6.71e-11 | 21 |
pallium | 6.71e-11 | 21 |
ecto-epithelium | 1.21e-10 | 73 |
pre-chordal neural plate | 4.32e-10 | 49 |
regional part of cerebral cortex | 4.65e-09 | 17 |
structure with developmental contribution from neural crest | 2.81e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.