FFCP PHASE1:Hg19::chr9:127023704..127023756,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000766!1.77e-31!76;CL:0000557!5.67e-28!71;CL:0000839!1.48e-25!70;CL:0002009!5.34e-25!65;CL:0002194!1.56e-24!63;CL:0000576!1.56e-24!63;CL:0000040!1.56e-24!63;CL:0000559!1.56e-24!63;CL:0000763!8.54e-20!112;CL:0000049!8.54e-20!112;CL:0002057!1.64e-19!42;CL:0000048!6.46e-18!430;CL:0000860!1.93e-16!45;CL:0000723!3.28e-16!436;CL:0000034!9.56e-15!444;CL:0002320!3.17e-14!365;CL:0000134!1.10e-12!358;CL:0002371!1.34e-12!591;CL:0000144!3.42e-12!625;CL:0000219!5.23e-11!390;CL:0000738!1.91e-08!140;CL:0000055!2.49e-07!180;CL:0002031!6.20e-07!124;CL:0000222!6.50e-07!119 | |ontology_enrichment_celltype=CL:0000766!1.77e-31!76;CL:0000557!5.67e-28!71;CL:0000839!1.48e-25!70;CL:0002009!5.34e-25!65;CL:0002194!1.56e-24!63;CL:0000576!1.56e-24!63;CL:0000040!1.56e-24!63;CL:0000559!1.56e-24!63;CL:0000763!8.54e-20!112;CL:0000049!8.54e-20!112;CL:0002057!1.64e-19!42;CL:0000048!6.46e-18!430;CL:0000860!1.93e-16!45;CL:0000723!3.28e-16!436;CL:0000034!9.56e-15!444;CL:0002320!3.17e-14!365;CL:0000134!1.10e-12!358;CL:0002371!1.34e-12!591;CL:0000144!3.42e-12!625;CL:0000219!5.23e-11!390;CL:0000738!1.91e-08!140;CL:0000055!2.49e-07!180;CL:0002031!6.20e-07!124;CL:0000222!6.50e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.62e-24;39!CL:0000234;6.62e-24;39!CL:0000860;1.26e-23;33!CL:0002057;1.26e-23;33!CL:0000576;1.56e-16;48!CL:0000766;2.80e-16;69!CL:0000763;2.14e-08;100 | |ontology_enrichment_celltype_v019=CL:0000473;6.62e-24;39!CL:0000234;6.62e-24;39!CL:0000860;1.26e-23;33!CL:0002057;1.26e-23;33!CL:0000576;1.56e-16;48!CL:0000766;2.80e-16;69!CL:0000763;2.14e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.67e-39,72;CL:0000557,4.08e-35,67;CL:0000839,1.07e-32,66;CL:0002009,2.00e-31,61;CL:0002194,7.15e-31,59;CL:0000576,7.15e-31,59;CL:0000040,7.15e-31,59;CL:0000559,7.15e-31,59;CL:0000473,7.12e-27,48;CL:0000234,7.12e-27,48;CL:0000763,6.51e-26,108;CL:0000049,6.51e-26,108;CL:0000860,4.24e-22,42;CL:0002057,4.24e-22,42;CL:0000048,1.68e-17,427;CL:0000723,2.33e-16,433;CL:0002320,5.34e-16,361;CL:0000034,2.56e-15,441;CL:0000134,3.58e-14,354;CL:0000219,1.54e-12,386;CL:0000738,2.96e-12,136;CL:0002031,2.14e-10,120;CL:0002032,6.11e-10,161;CL:0000837,6.11e-10,161;CL:0000037,4.52e-09,168;CL:0000988,6.80e-09,177;CL:0002087,3.81e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;8.57e-17;42!CL:0000049;1.17e-07;108 | |ontology_enrichment_development_v019=CL:0002057;8.57e-17;42!CL:0000049;1.17e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.92e-30!112;UBERON:0002371!1.62e-29!80;UBERON:0002390!5.94e-28!102;UBERON:0003061!5.94e-28!102;UBERON:0001474!8.69e-26!86;UBERON:0002405!2.18e-25!115;UBERON:0004765!2.49e-24!101;UBERON:0001434!2.49e-24!101;UBERON:0002204!6.25e-24!167;UBERON:0003081!1.06e-22!216;UBERON:0002384!3.02e-14!375;UBERON:0000926!8.56e-09!448;UBERON:0004120!8.56e-09!448;UBERON:0006603!8.56e-09!448;UBERON:0004535!1.38e-08!110;UBERON:0001009!3.93e-08!113;UBERON:0000479!2.69e-07!787;UBERON:0000467!8.08e-07!625 | |ontology_enrichment_uberon=UBERON:0002193!7.92e-30!112;UBERON:0002371!1.62e-29!80;UBERON:0002390!5.94e-28!102;UBERON:0003061!5.94e-28!102;UBERON:0001474!8.69e-26!86;UBERON:0002405!2.18e-25!115;UBERON:0004765!2.49e-24!101;UBERON:0001434!2.49e-24!101;UBERON:0002204!6.25e-24!167;UBERON:0003081!1.06e-22!216;UBERON:0002384!3.02e-14!375;UBERON:0000926!8.56e-09!448;UBERON:0004120!8.56e-09!448;UBERON:0006603!8.56e-09!448;UBERON:0004535!1.38e-08!110;UBERON:0001009!3.93e-08!113;UBERON:0000479!2.69e-07!787;UBERON:0000467!8.08e-07!625 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.39e-37,76;UBERON:0002193,2.59e-36,108;UBERON:0002390,1.04e-34,98;UBERON:0003061,1.04e-34,98;UBERON:0002405,8.03e-34,93;UBERON:0001474,1.90e-32,82;UBERON:0004765,2.98e-32,90;UBERON:0001434,9.12e-32,100;UBERON:0003081,7.95e-28,203;UBERON:0002204,1.60e-24,167;UBERON:0002384,2.76e-16,371;UBERON:0000926,1.77e-15,315;UBERON:0004120,1.77e-15,315;UBERON:0006603,1.77e-15,315;UBERON:0004535,1.56e-08,109;UBERON:0001009,8.17e-08,112 | |||
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| ||
|short_description=p3@NEK6 | |short_description=p3@NEK6 | ||
}} | }} |
Revision as of 04:07, 18 November 2012
Short description: | p3@NEK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NEK6_5end |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | 0bp_to_ENST00000373596, ENST00000425237_5end |
EntrezGene: | NEK6 |
HGNC: | 7749 |
UniProt: | Q5TBG1Q5TBH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.67e-39 | 72 |
granulocyte monocyte progenitor cell | 4.08e-35 | 67 |
myeloid lineage restricted progenitor cell | 1.07e-32 | 66 |
macrophage dendritic cell progenitor | 2.00e-31 | 61 |
monopoietic cell | 7.15e-31 | 59 |
monocyte | 7.15e-31 | 59 |
monoblast | 7.15e-31 | 59 |
promonocyte | 7.15e-31 | 59 |
defensive cell | 7.12e-27 | 48 |
phagocyte | 7.12e-27 | 48 |
myeloid cell | 6.51e-26 | 108 |
common myeloid progenitor | 6.51e-26 | 108 |
classical monocyte | 4.24e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.24e-22 | 42 |
multi fate stem cell | 1.68e-17 | 427 |
somatic stem cell | 2.33e-16 | 433 |
connective tissue cell | 5.34e-16 | 361 |
stem cell | 2.56e-15 | 441 |
mesenchymal cell | 3.58e-14 | 354 |
motile cell | 1.54e-12 | 386 |
leukocyte | 2.96e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 2.14e-10 | 120 |
hematopoietic oligopotent progenitor cell | 6.11e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.11e-10 | 161 |
hematopoietic stem cell | 4.52e-09 | 168 |
hematopoietic cell | 6.80e-09 | 177 |
nongranular leukocyte | 3.81e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.39e-37 | 76 |
hemolymphoid system | 2.59e-36 | 108 |
hematopoietic system | 1.04e-34 | 98 |
blood island | 1.04e-34 | 98 |
immune system | 8.03e-34 | 93 |
bone element | 1.90e-32 | 82 |
skeletal element | 2.98e-32 | 90 |
skeletal system | 9.12e-32 | 100 |
lateral plate mesoderm | 7.95e-28 | 203 |
musculoskeletal system | 1.60e-24 | 167 |
connective tissue | 2.76e-16 | 371 |
mesoderm | 1.77e-15 | 315 |
mesoderm-derived structure | 1.77e-15 | 315 |
presumptive mesoderm | 1.77e-15 | 315 |
cardiovascular system | 1.56e-08 | 109 |
circulatory system | 8.17e-08 | 112 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.