FFCP PHASE1:Hg19::chr12:120805901..120805917,-: Difference between revisions
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|ontology_enrichment_development_v019=UBERON:0006238;5.52e-09;10!UBERON:0003056;1.30e-08;3 | |ontology_enrichment_development_v019=UBERON:0006238;5.52e-09;10!UBERON:0003056;1.30e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;2.60e-08;11!DOID:5409;6.87e-07;4 | |ontology_enrichment_disease_v019=DOID:3093;2.60e-08;11!DOID:5409;6.87e-07;4 | ||
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| ||
|short_description=p8@MSI1 | |short_description=p8@MSI1 | ||
}} | }} |
Revision as of 15:18, 19 November 2012
Short description: | p8@MSI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_MSI1_5end |
Coexpression cluster: | C2189_neuroblastoma_medulloblastoma_small_retinoblastoma_parietal_temporal_acute |
Association with transcript: | -29bp_to_ENST00000546985_5end |
EntrezGene: | MSI1 |
HGNC: | 7330 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.20e-09 | 59 |
migratory neural crest cell | 1.26e-08 | 41 |
neural cell | 5.24e-08 | 25 |
ectodermal cell | 1.28e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.79e-45 | 2 |
regional part of epithalamus | 9.79e-45 | 2 |
secretory circumventricular organ | 9.79e-45 | 2 |
circumventricular organ | 9.79e-45 | 2 |
epithalamus | 9.79e-45 | 2 |
gland of diencephalon | 5.75e-23 | 4 |
neuroendocrine gland | 5.75e-23 | 4 |
regional part of diencephalon | 5.75e-23 | 4 |
diencephalon | 1.40e-13 | 7 |
future diencephalon | 1.40e-13 | 7 |
nervous system | 1.28e-11 | 89 |
central nervous system | 1.55e-09 | 81 |
brain | 4.96e-08 | 68 |
future brain | 4.96e-08 | 68 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.37e-08 | 11 |
lung small cell carcinoma | 6.87e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.