FFCP PHASE1:Hg19::chr19:17295496..17295508,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000791!4.85e-23!18;CL:0000789!4.85e-23!18;CL:0002420!4.85e-23!18;CL:0002419!4.85e-23!18;CL:0000790!4.85e-23!18;CL:0000084!6.25e-18!25;CL:0000827!6.25e-18!25;CL:0000625!1.27e-17!11;CL:0000838!1.43e-15!52;CL:0000542!3.76e-15!53;CL:0000051!3.76e-15!53;CL:0000037!1.99e-14!172;CL:0000566!1.99e-14!172;CL:0002087!4.02e-13!119;CL:0000988!6.02e-13!182;CL:0002032!6.73e-13!165;CL:0000837!6.73e-13!165;CL:0000738!2.37e-11!140;CL:0002031!1.29e-09!124;CL:0000623!2.54e-07!3;CL:0000825!2.54e-07!3;CL:0000842!7.30e-07!3 | |ontology_enrichment_celltype=CL:0000791!4.85e-23!18;CL:0000789!4.85e-23!18;CL:0002420!4.85e-23!18;CL:0002419!4.85e-23!18;CL:0000790!4.85e-23!18;CL:0000084!6.25e-18!25;CL:0000827!6.25e-18!25;CL:0000625!1.27e-17!11;CL:0000838!1.43e-15!52;CL:0000542!3.76e-15!53;CL:0000051!3.76e-15!53;CL:0000037!1.99e-14!172;CL:0000566!1.99e-14!172;CL:0002087!4.02e-13!119;CL:0000988!6.02e-13!182;CL:0002032!6.73e-13!165;CL:0000837!6.73e-13!165;CL:0000738!2.37e-11!140;CL:0002031!1.29e-09!124;CL:0000623!2.54e-07!3;CL:0000825!2.54e-07!3;CL:0000842!7.30e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.17e-12;11!CL:0000791;1.22e-10;18!CL:0000789;1.22e-10;18!CL:0002419;1.22e-10;18!CL:0000084;3.58e-10;25!CL:0000623;2.59e-08;3!CL:0002127;3.07e-07;1!CL:0000911;3.07e-07;1!CL:0000814;3.07e-07;1 | |ontology_enrichment_celltype_v019=CL:0000625;2.17e-12;11!CL:0000791;1.22e-10;18!CL:0000789;1.22e-10;18!CL:0002419;1.22e-10;18!CL:0000084;3.58e-10;25!CL:0000623;2.59e-08;3!CL:0002127;3.07e-07;1!CL:0000911;3.07e-07;1!CL:0000814;3.07e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.86e-12,11;CL:0000838,7.32e-11,52;CL:0000542,1.28e-10,53;CL:0000051,1.28e-10,53;CL:0000791,1.53e-10,18;CL:0000789,1.53e-10,18;CL:0002420,1.53e-10,18;CL:0002419,1.53e-10,18;CL:0000790,1.53e-10,18;CL:0000084,4.34e-10,25;CL:0000827,4.34e-10,25;CL:0000623,2.33e-08,3;CL:0000825,2.33e-08,3;CL:0002032,2.41e-07,161;CL:0000837,2.41e-07,161;CL:0002127,3.36e-07,1;CL:0000914,3.36e-07,1;CL:0000911,3.36e-07,1;CL:0000814,3.36e-07,1;CL:0002042,3.36e-07,1;CL:0002039,3.36e-07,1;CL:0002040,3.36e-07,1;CL:0002041,3.36e-07,1;CL:0000037,6.85e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;1.22e-10;18!UBERON:0001045;7.55e-07;1 | |ontology_enrichment_development_v019=CL:0000790;1.22e-10;18!UBERON:0001045;7.55e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:1240,2.95e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000178!9.39e-10!15;UBERON:0000179!9.39e-10!15;UBERON:0000463!9.39e-10!15;UBERON:0004177!1.33e-09!7;UBERON:0002370!2.54e-08!4;UBERON:0005058!2.54e-08!4;UBERON:0009113!2.54e-08!4;UBERON:0003295!2.54e-08!4;UBERON:0005562!2.54e-08!4 | |ontology_enrichment_uberon=UBERON:0000178!9.39e-10!15;UBERON:0000179!9.39e-10!15;UBERON:0000463!9.39e-10!15;UBERON:0004177!1.33e-09!7;UBERON:0002370!2.54e-08!4;UBERON:0005058!2.54e-08!4;UBERON:0009113!2.54e-08!4;UBERON:0003295!2.54e-08!4;UBERON:0005562!2.54e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;7.55e-07;1!UBERON:0001154;7.55e-07;1!UBERON:0001153;7.55e-07;1!UBERON:0002171;7.55e-07;1!UBERON:0009854;7.55e-07;1!UBERON:0001961;7.55e-07;1!UBERON:0001744;7.55e-07;1!UBERON:0006518;7.55e-07;1!UBERON:0008949;7.55e-07;1!UBERON:0000101;7.55e-07;1!UBERON:0001042;7.55e-07;1!UBERON:0002167;7.55e-07;1!UBERON:0001735;7.55e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002372;7.55e-07;1!UBERON:0001154;7.55e-07;1!UBERON:0001153;7.55e-07;1!UBERON:0002171;7.55e-07;1!UBERON:0009854;7.55e-07;1!UBERON:0001961;7.55e-07;1!UBERON:0001744;7.55e-07;1!UBERON:0006518;7.55e-07;1!UBERON:0008949;7.55e-07;1!UBERON:0000101;7.55e-07;1!UBERON:0001042;7.55e-07;1!UBERON:0002167;7.55e-07;1!UBERON:0001735;7.55e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.37e-07,1;UBERON:0001153,5.37e-07,1;UBERON:0001045,5.37e-07,1;UBERON:0002171,9.51e-07,1;UBERON:0006518,9.51e-07,1;UBERON:0008949,9.51e-07,1;UBERON:0000101,9.51e-07,1;UBERON:0002167,9.51e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0,0,0,0,0,0,0,0,0.601633342410425,0.868043482863407,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,1.1384259382189,0,1.91136614062614,0,0.560508562981536,0,0.786839080455332,0,0.616804496998528,2.84217042164153,0,0.946895611469467,0,1.89397776704795,0.294605907474837,0.221533894583621,0.270803863765016,1.66518715643378,1.30059347559878,4.60426132890293,8.5668505513613,4.92665245749589,1.03800594213442,0.802622484269139,1.04535523804977,2.71942422474159,0.766440987203842,1.03088233644789,1.51811815211702,1.27426165729639,0.651083453856419,0.950452044448374,1.35517607169996,1.02389288923535,1.24930726552346,0.473554504088034,0,0.403213486449465,0.267440195783507,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35378802386407,0.591092280605782,1.50939302401662,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,1.70894156152249,0.714695326373367,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,1.79621434289535,2.68107518185313,1.90506224451495,0,0.280797178113459,0.228234679033192,0,0,3.89371088943688,1.92705690124439,1.00899853595524,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0.829169439458779,0,0.213233981900981,0.23806443146374,0.322944549180031,0.0620747142958579,0,0,0,0,0,1.01028079521881,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,1.20764276154616,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0,0,0,0,0,0,0,0,0.601633342410425,0.868043482863407,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,1.1384259382189,0,1.91136614062614,0,0.560508562981536,0,0.786839080455332,0,0.616804496998528,2.84217042164153,0,0.946895611469467,0,1.89397776704795,0.294605907474837,0.221533894583621,0.270803863765016,1.66518715643378,1.30059347559878,4.60426132890293,8.5668505513613,4.92665245749589,1.03800594213442,0.802622484269139,1.04535523804977,2.71942422474159,0.766440987203842,1.03088233644789,1.51811815211702,1.27426165729639,0.651083453856419,0.950452044448374,1.35517607169996,1.02389288923535,1.24930726552346,0.473554504088034,0,0.403213486449465,0.267440195783507,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35378802386407,0.591092280605782,1.50939302401662,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,1.70894156152249,0.714695326373367,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,1.79621434289535,2.68107518185313,1.90506224451495,0,0.280797178113459,0.228234679033192,0,0,3.89371088943688,1.92705690124439,1.00899853595524,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0.829169439458779,0,0.213233981900981,0.23806443146374,0.322944549180031,0.0620747142958579,0,0,0,0,0,1.01028079521881,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,1.20764276154616,0 | ||
|short_description=p@chr19:17295496..17295508,+ | |short_description=p@chr19:17295496..17295508,+ | ||
}} | }} |
Revision as of 19:49, 19 November 2012
Short description: | p@chr19:17295496..17295508, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:17295496..17295508, + |
Coexpression cluster: | C300_CD4_CD8_NK_Natural_blood_mycosis_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.86e-12 | 11 |
lymphoid lineage restricted progenitor cell | 7.32e-11 | 52 |
lymphocyte | 1.28e-10 | 53 |
common lymphoid progenitor | 1.28e-10 | 53 |
mature alpha-beta T cell | 1.53e-10 | 18 |
alpha-beta T cell | 1.53e-10 | 18 |
immature T cell | 1.53e-10 | 18 |
mature T cell | 1.53e-10 | 18 |
immature alpha-beta T cell | 1.53e-10 | 18 |
T cell | 4.34e-10 | 25 |
pro-T cell | 4.34e-10 | 25 |
natural killer cell | 2.33e-08 | 3 |
pro-NK cell | 2.33e-08 | 3 |
hematopoietic oligopotent progenitor cell | 2.41e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.41e-07 | 161 |
innate effector T cell | 3.36e-07 | 1 |
immature NK T cell | 3.36e-07 | 1 |
effector T cell | 3.36e-07 | 1 |
mature NK T cell | 3.36e-07 | 1 |
immature NK T cell stage IV | 3.36e-07 | 1 |
immature NK T cell stage I | 3.36e-07 | 1 |
immature NK T cell stage II | 3.36e-07 | 1 |
immature NK T cell stage III | 3.36e-07 | 1 |
hematopoietic stem cell | 6.85e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.37e-07 | 1 |
caecum | 5.37e-07 | 1 |
midgut | 5.37e-07 | 1 |
lower lobe of right lung | 9.51e-07 | 1 |
right lung lobe | 9.51e-07 | 1 |
lower lobe of lung | 9.51e-07 | 1 |
lobe of lung | 9.51e-07 | 1 |
right lung | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.95e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.