FFCP PHASE1:Hg19::chr19:15344243..15344265,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002322!5.61e-09!5 | |ontology_enrichment_celltype=CL:0002322!5.61e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.89e-34;5!CL:0002321;2.55e-11;15!CL:0000540;4.02e-11;6!CL:0000404;4.02e-11;6!CL:0000039;4.48e-09;7!CL:0000586;4.48e-09;7 | |ontology_enrichment_celltype_v019=CL:0002322;2.89e-34;5!CL:0002321;2.55e-11;15!CL:0000540;4.02e-11;6!CL:0000404;4.02e-11;6!CL:0000039;4.48e-09;7!CL:0000586;4.48e-09;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.62e-34,5;CL:0000540,3.77e-11,6;CL:0000031,3.77e-11,6;CL:0000404,3.77e-11,6;CL:0000039,4.68e-09,7;CL:0000586,4.68e-09,7;CL:0000047,1.78e-08,8;CL:0000148,9.83e-07,10;CL:0000541,9.83e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.47e-16;10!UBERON:0005564;1.47e-16;10!CL:0000031;4.02e-11;6 | |ontology_enrichment_development_v019=UBERON:0009117;1.47e-16;10!UBERON:0005564;1.47e-16;10!CL:0000031;4.02e-11;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;1.93e-07;22!DOID:2994;1.93e-07;22 | |ontology_enrichment_disease_v019=DOID:3095;1.93e-07;22!DOID:2994;1.93e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,2.07e-07,22;DOID:2994,2.07e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.97e-13!86;UBERON:0001049!7.06e-13!57;UBERON:0005068!7.06e-13!57;UBERON:0006241!7.06e-13!57;UBERON:0007135!7.06e-13!57;UBERON:0001017!1.16e-12!82;UBERON:0007023!6.24e-12!115;UBERON:0000073!3.92e-11!94;UBERON:0001016!3.92e-11!94;UBERON:0003075!1.14e-10!86;UBERON:0007284!1.14e-10!86;UBERON:0002616!4.15e-10!59;UBERON:0002346!9.26e-10!90;UBERON:0002780!1.55e-09!41;UBERON:0001890!1.55e-09!41;UBERON:0006240!1.55e-09!41;UBERON:0003080!3.56e-09!42;UBERON:0002020!1.00e-08!34;UBERON:0003528!1.00e-08!34;UBERON:0001893!1.16e-08!34;UBERON:0002791!3.93e-08!33;UBERON:0000955!5.08e-08!69;UBERON:0006238!5.08e-08!69;UBERON:0001869!1.85e-07!32;UBERON:0002308!1.97e-07!9;UBERON:0000125!1.97e-07!9;UBERON:0003056!2.17e-07!61;UBERON:0000473!4.10e-07!8 | |ontology_enrichment_uberon=UBERON:0005743!1.97e-13!86;UBERON:0001049!7.06e-13!57;UBERON:0005068!7.06e-13!57;UBERON:0006241!7.06e-13!57;UBERON:0007135!7.06e-13!57;UBERON:0001017!1.16e-12!82;UBERON:0007023!6.24e-12!115;UBERON:0000073!3.92e-11!94;UBERON:0001016!3.92e-11!94;UBERON:0003075!1.14e-10!86;UBERON:0007284!1.14e-10!86;UBERON:0002616!4.15e-10!59;UBERON:0002346!9.26e-10!90;UBERON:0002780!1.55e-09!41;UBERON:0001890!1.55e-09!41;UBERON:0006240!1.55e-09!41;UBERON:0003080!3.56e-09!42;UBERON:0002020!1.00e-08!34;UBERON:0003528!1.00e-08!34;UBERON:0001893!1.16e-08!34;UBERON:0002791!3.93e-08!33;UBERON:0000955!5.08e-08!69;UBERON:0006238!5.08e-08!69;UBERON:0001869!1.85e-07!32;UBERON:0002308!1.97e-07!9;UBERON:0000125!1.97e-07!9;UBERON:0003056!2.17e-07!61;UBERON:0000473!4.10e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.92e-21;8!UBERON:0003135;4.85e-15;11!UBERON:0000922;1.65e-08;49!UBERON:0002171;7.33e-08;1!UBERON:0006518;7.33e-08;1!UBERON:0008949;7.33e-08;1!UBERON:0000101;7.33e-08;1!UBERON:0002167;7.33e-08;1!UBERON:0000991;8.76e-08;21!UBERON:0003296;1.18e-07;4!UBERON:0010133;1.18e-07;4!UBERON:0003101;2.03e-07;22!UBERON:0000079;2.03e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;9.92e-21;8!UBERON:0003135;4.85e-15;11!UBERON:0000922;1.65e-08;49!UBERON:0002171;7.33e-08;1!UBERON:0006518;7.33e-08;1!UBERON:0008949;7.33e-08;1!UBERON:0000101;7.33e-08;1!UBERON:0002167;7.33e-08;1!UBERON:0000991;8.76e-08;21!UBERON:0003296;1.18e-07;4!UBERON:0010133;1.18e-07;4!UBERON:0003101;2.03e-07;22!UBERON:0000079;2.03e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.97e-21,8;UBERON:0003135,4.51e-15,11;UBERON:0002171,5.40e-08,1;UBERON:0006518,5.40e-08,1;UBERON:0008949,5.40e-08,1;UBERON:0000101,5.40e-08,1;UBERON:0002167,5.40e-08,1;UBERON:0000991,8.45e-08,21;UBERON:0009196,8.45e-08,21;UBERON:0009117,8.45e-08,21;UBERON:0005564,8.45e-08,21;UBERON:0003296,1.30e-07,4;UBERON:0010133,1.30e-07,4;UBERON:0004176,1.96e-07,22;UBERON:0003101,1.96e-07,22;UBERON:0000079,1.96e-07,22;UBERON:0003886,9.81e-07,54 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,3.90315859614705,4.24095258628753,3.137236457477,1.86589899027667,4.28945446488568,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,2.77126022639704,0,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0.272406812223151,6.26937279013575,4.95141971750042,3.73896304226267,0,1.5476039091159,0.121499113316049,0,0.472834243795189,1.46872846777995,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0,2.11444506695002,0.640724475406168,0.471612915298998,1.65695622138878,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0.1251909307065,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,1.18259708457151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.319267718114302,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,0,3.02655349996942,0,1.36597314810779,0.0887023701626388,0.115233987555779,0,0.135939465953663,0,0.472775363535873,0,0.313972371402056,0.157115589916002,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0.219881033490858,0,0.0771741581079447,1.09279780251979,0.470317296361523,0,0,0,0.297046400327086,0.4226557275834,0,0.187967835959707,0.45120521581504,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,1.31118686356435,7.60191006068622,1.52983244612973,2.93939145792117,1.19463369395298,0.50141507858475,1.66713136080127,4.01946195234268,0,0.20686599172379,0,0.23806443146374,0.129177819672012,0.0620747142958579,0,0.12729431655633,0.202117188958219,0.217716747896961,0.684466602170562,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,3.90315859614705,4.24095258628753,3.137236457477,1.86589899027667,4.28945446488568,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,2.77126022639704,0,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0.272406812223151,6.26937279013575,4.95141971750042,3.73896304226267,0,1.5476039091159,0.121499113316049,0,0.472834243795189,1.46872846777995,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0,2.11444506695002,0.640724475406168,0.471612915298998,1.65695622138878,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0.1251909307065,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,1.18259708457151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.319267718114302,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,0,3.02655349996942,0,1.36597314810779,0.0887023701626388,0.115233987555779,0,0.135939465953663,0,0.472775363535873,0,0.313972371402056,0.157115589916002,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0.219881033490858,0,0.0771741581079447,1.09279780251979,0.470317296361523,0,0,0,0.297046400327086,0.4226557275834,0,0.187967835959707,0.45120521581504,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,1.31118686356435,7.60191006068622,1.52983244612973,2.93939145792117,1.19463369395298,0.50141507858475,1.66713136080127,4.01946195234268,0,0.20686599172379,0,0.23806443146374,0.129177819672012,0.0620747142958579,0,0.12729431655633,0.202117188958219,0.217716747896961,0.684466602170562,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p2@EPHX3 | |short_description=p2@EPHX3 | ||
}} | }} |
Revision as of 16:30, 20 November 2012
Short description: | p2@EPHX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EPHX3_5end |
Coexpression cluster: | C3450_teratocarcinoma_iPS_H9_HES3GFP_extraskeletal_testicular_testis |
Association with transcript: | -385bp_to_ENST00000435261, NM_001142886, uc002naq.2_5end |
EntrezGene: | EPHX3 |
HGNC: | 23760 |
UniProt: | Q9H6B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.62e-34 | 5 |
neuron | 3.77e-11 | 6 |
neuroblast | 3.77e-11 | 6 |
electrically signaling cell | 3.77e-11 | 6 |
germ line cell | 4.68e-09 | 7 |
germ cell | 4.68e-09 | 7 |
neuronal stem cell | 1.78e-08 | 8 |
melanocyte | 9.83e-07 | 10 |
melanoblast | 9.83e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 8.97e-21 | 8 |
male reproductive organ | 4.51e-15 | 11 |
lower lobe of right lung | 5.40e-08 | 1 |
right lung lobe | 5.40e-08 | 1 |
lower lobe of lung | 5.40e-08 | 1 |
lobe of lung | 5.40e-08 | 1 |
right lung | 5.40e-08 | 1 |
gonad | 8.45e-08 | 21 |
indifferent external genitalia | 8.45e-08 | 21 |
indifferent gonad | 8.45e-08 | 21 |
gonad primordium | 8.45e-08 | 21 |
gland of diencephalon | 1.30e-07 | 4 |
neuroendocrine gland | 1.30e-07 | 4 |
external genitalia | 1.96e-07 | 22 |
male organism | 1.96e-07 | 22 |
male reproductive system | 1.96e-07 | 22 |
body cavity precursor | 9.81e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.07e-07 | 22 |
germ cell cancer | 2.07e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.