FFCP PHASE1:Hg19::chr11:108408895..108408924,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23086|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30578|TSSclassifier=S|UniProt=E7EN83|association_with_transcript=0bp_to_ENST00000439956,ENST00000524840_5end|coexpression_cluster_id=C120|description=CAGE_peak_3_at_EXPH5_5end|id=chr11:108408895..108408924,-|ontology_enrichment_celltype=CL:0002076!2.34e-15!43;CL:0000223!1.00e-12!59;CL:0002251!5.92e-10!21;CL:0002159!3.79e-09!13;CL:0000622!4.05e-07!5;CL:0002368!8.35e-07!13|ontology_enrichment_celltype_v019=CL:0002159;8.75e-12;14!CL:0002621;3.51e-10;3!CL:0002541;1.45e-09;3!CL:0002251;2.08e-08;20!CL:0002076;6.90e-08;42!CL:0001014;4.00e-07;2!CL:0001016;4.00e-07;2|ontology_enrichment_celltype_v019_2=CL:0002159,1.20e-11,14;CL:0002621,3.26e-10,3;CL:0002541,1.31e-09,3;CL:0002076,7.24e-09,42;CL:0002251,1.70e-08,20;CL:0001014,3.66e-07,2;CL:0001016,3.66e-07,2;CL:0000223,9.24e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.22e-13!169;UBERON:0000925!1.22e-13!169;UBERON:0006595!1.22e-13!169;UBERON:0007023!3.76e-13!115;UBERON:0001004!3.88e-13!72;UBERON:0001007!8.83e-12!155;UBERON:0001555!8.83e-12!155;UBERON:0007026!8.83e-12!155;UBERON:0000166!5.99e-11!21;UBERON:0000161!8.90e-11!35;UBERON:0003408!1.66e-10!10;UBERON:0004921!3.11e-09!129;UBERON:0004185!3.11e-09!129;UBERON:0001044!3.40e-09!6;UBERON:0003293!3.40e-09!6;UBERON:0003294!3.40e-09!6;UBERON:0010047!3.40e-09!6;UBERON:0000167!3.40e-09!6;UBERON:0000077!1.44e-08!130;UBERON:0000165!2.41e-08!28;UBERON:0000930!2.41e-08!28;UBERON:0000153!3.48e-08!129;UBERON:0007811!3.48e-08!129;UBERON:0000064!5.76e-07!219;UBERON:0000065!6.48e-07!53|ontology_enrichment_uberon_v019=UBERON:0001044;4.89e-13;6!UBERON:0003293;4.89e-13;6!UBERON:0003294;4.89e-13;6!UBERON:0010047;4.89e-13;6!UBERON:0003408;4.89e-13;6!UBERON:0000167;4.89e-13;6!UBERON:0000161;6.66e-12;19!UBERON:0000166;6.66e-12;19!UBERON:0000165;1.91e-11;28!UBERON:0001041;2.67e-10;14!UBERON:0001949;3.51e-10;3!UBERON:0003124;1.45e-09;3!UBERON:0000920;1.45e-09;3!UBERON:0000153;1.25e-08;54!UBERON:0004921;8.71e-08;33!UBERON:0000341;1.88e-07;2!UBERON:0001829;2.41e-07;2!UBERON:0003127;3.18e-07;2!UBERON:0005631;3.62e-07;10!UBERON:0000158;3.62e-07;10!UBERON:0003929;3.74e-07;7!UBERON:0006562;4.45e-07;2!UBERON:0007811;4.75e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.87e-17,74;UBERON:0000166,2.68e-15,22;UBERON:0000153,1.38e-14,62;UBERON:0007811,1.38e-14,62;UBERON:0003408,4.74e-14,10;UBERON:0001044,4.27e-13,6;UBERON:0003293,4.27e-13,6;UBERON:0003294,4.27e-13,6;UBERON:0010047,4.27e-13,6;UBERON:0000167,4.27e-13,6;UBERON:0000161,1.34e-11,36;UBERON:0000165,5.44e-11,29;UBERON:0000930,5.44e-11,29;UBERON:0004119,8.40e-11,160;UBERON:0000925,8.40e-11,160;UBERON:0006595,8.40e-11,160;UBERON:0003124,3.25e-10,7;UBERON:0001949,3.26e-10,3;UBERON:0000033,3.51e-10,56;UBERON:0003102,3.88e-10,99;UBERON:0000920,1.31e-09,3;UBERON:0006562,2.14e-09,11;UBERON:0005631,2.63e-09,14;UBERON:0000158,2.63e-09,14;UBERON:0001041,4.16e-09,87;UBERON:0000065,6.20e-09,54;UBERON:0004921,1.78e-08,118;UBERON:0001007,3.26e-08,145;UBERON:0001555,3.26e-08,145;UBERON:0007026,3.26e-08,145;UBERON:0001444,8.58e-08,49;UBERON:0001042,1.66e-07,10;UBERON:0009145,1.66e-07,10;UBERON:0000341,1.97e-07,2;UBERON:0001829,2.30e-07,2;UBERON:0003127,2.77e-07,2|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0,0.260118695119756,0,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02478218224572,4.90943017063502,7.7437240755031,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72183813960359,0,4.06076056011915,2.24803506515239,1.3068766413512,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,1.51183915378974,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,1.5156378572313,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.40101294060657,1.28913384510255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,1.95777922130672,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,2.47927373041467,0.960950336825531,1.27612712494584,2.52894452138875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23086 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30578 | |||
|TSSclassifier=S | |||
|UniProt=E7EN83 | |||
|association_with_transcript=0bp_to_ENST00000439956,ENST00000524840_5end | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_3_at_EXPH5_5end | |||
|id=chr11:108408895..108408924,- | |||
|ontology_enrichment_celltype=CL:0002076!2.34e-15!43;CL:0000223!1.00e-12!59;CL:0002251!5.92e-10!21;CL:0002159!3.79e-09!13;CL:0000622!4.05e-07!5;CL:0002368!8.35e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002159;8.75e-12;14!CL:0002621;3.51e-10;3!CL:0002541;1.45e-09;3!CL:0002251;2.08e-08;20!CL:0002076;6.90e-08;42!CL:0001014;4.00e-07;2!CL:0001016;4.00e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.20e-11,14;CL:0002621,3.26e-10,3;CL:0002541,1.31e-09,3;CL:0002076,7.24e-09,42;CL:0002251,1.70e-08,20;CL:0001014,3.66e-07,2;CL:0001016,3.66e-07,2;CL:0000223,9.24e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.22e-13!169;UBERON:0000925!1.22e-13!169;UBERON:0006595!1.22e-13!169;UBERON:0007023!3.76e-13!115;UBERON:0001004!3.88e-13!72;UBERON:0001007!8.83e-12!155;UBERON:0001555!8.83e-12!155;UBERON:0007026!8.83e-12!155;UBERON:0000166!5.99e-11!21;UBERON:0000161!8.90e-11!35;UBERON:0003408!1.66e-10!10;UBERON:0004921!3.11e-09!129;UBERON:0004185!3.11e-09!129;UBERON:0001044!3.40e-09!6;UBERON:0003293!3.40e-09!6;UBERON:0003294!3.40e-09!6;UBERON:0010047!3.40e-09!6;UBERON:0000167!3.40e-09!6;UBERON:0000077!1.44e-08!130;UBERON:0000165!2.41e-08!28;UBERON:0000930!2.41e-08!28;UBERON:0000153!3.48e-08!129;UBERON:0007811!3.48e-08!129;UBERON:0000064!5.76e-07!219;UBERON:0000065!6.48e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;4.89e-13;6!UBERON:0003293;4.89e-13;6!UBERON:0003294;4.89e-13;6!UBERON:0010047;4.89e-13;6!UBERON:0003408;4.89e-13;6!UBERON:0000167;4.89e-13;6!UBERON:0000161;6.66e-12;19!UBERON:0000166;6.66e-12;19!UBERON:0000165;1.91e-11;28!UBERON:0001041;2.67e-10;14!UBERON:0001949;3.51e-10;3!UBERON:0003124;1.45e-09;3!UBERON:0000920;1.45e-09;3!UBERON:0000153;1.25e-08;54!UBERON:0004921;8.71e-08;33!UBERON:0000341;1.88e-07;2!UBERON:0001829;2.41e-07;2!UBERON:0003127;3.18e-07;2!UBERON:0005631;3.62e-07;10!UBERON:0000158;3.62e-07;10!UBERON:0003929;3.74e-07;7!UBERON:0006562;4.45e-07;2!UBERON:0007811;4.75e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.87e-17,74;UBERON:0000166,2.68e-15,22;UBERON:0000153,1.38e-14,62;UBERON:0007811,1.38e-14,62;UBERON:0003408,4.74e-14,10;UBERON:0001044,4.27e-13,6;UBERON:0003293,4.27e-13,6;UBERON:0003294,4.27e-13,6;UBERON:0010047,4.27e-13,6;UBERON:0000167,4.27e-13,6;UBERON:0000161,1.34e-11,36;UBERON:0000165,5.44e-11,29;UBERON:0000930,5.44e-11,29;UBERON:0004119,8.40e-11,160;UBERON:0000925,8.40e-11,160;UBERON:0006595,8.40e-11,160;UBERON:0003124,3.25e-10,7;UBERON:0001949,3.26e-10,3;UBERON:0000033,3.51e-10,56;UBERON:0003102,3.88e-10,99;UBERON:0000920,1.31e-09,3;UBERON:0006562,2.14e-09,11;UBERON:0005631,2.63e-09,14;UBERON:0000158,2.63e-09,14;UBERON:0001041,4.16e-09,87;UBERON:0000065,6.20e-09,54;UBERON:0004921,1.78e-08,118;UBERON:0001007,3.26e-08,145;UBERON:0001555,3.26e-08,145;UBERON:0007026,3.26e-08,145;UBERON:0001444,8.58e-08,49;UBERON:0001042,1.66e-07,10;UBERON:0009145,1.66e-07,10;UBERON:0000341,1.97e-07,2;UBERON:0001829,2.30e-07,2;UBERON:0003127,2.77e-07,2 | |||
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|short_description=p3@EXPH5 | |||
}} |
Revision as of 15:34, 10 September 2013
Short description: | p3@EXPH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_EXPH5_5end |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | 0bp_to_ENST00000439956, ENST00000524840_5end |
EntrezGene: | EXPH5 |
HGNC: | 30578 |
UniProt: | E7EN83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.20e-11 | 14 |
gingival epithelial cell | 3.26e-10 | 3 |
chorionic membrane mesenchymal stem cell | 1.31e-09 | 3 |
endo-epithelial cell | 7.24e-09 | 42 |
epithelial cell of alimentary canal | 1.70e-08 | 20 |
CD1a-positive Langerhans cell | 3.66e-07 | 2 |
immature CD1a-positive Langerhans cell | 3.66e-07 | 2 |
endodermal cell | 9.24e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.87e-17 | 74 |
oral opening | 2.68e-15 | 22 |
anterior region of body | 1.38e-14 | 62 |
craniocervical region | 1.38e-14 | 62 |
gland of gut | 4.74e-14 | 10 |
saliva-secreting gland | 4.27e-13 | 6 |
gland of oral region | 4.27e-13 | 6 |
gland of foregut | 4.27e-13 | 6 |
oral gland | 4.27e-13 | 6 |
oral cavity | 4.27e-13 | 6 |
orifice | 1.34e-11 | 36 |
mouth | 5.44e-11 | 29 |
stomodeum | 5.44e-11 | 29 |
endoderm-derived structure | 8.40e-11 | 160 |
endoderm | 8.40e-11 | 160 |
presumptive endoderm | 8.40e-11 | 160 |
chorion | 3.25e-10 | 7 |
gingival epithelium | 3.26e-10 | 3 |
head | 3.51e-10 | 56 |
surface structure | 3.88e-10 | 99 |
egg chorion | 1.31e-09 | 3 |
pharynx | 2.14e-09 | 11 |
extraembryonic membrane | 2.63e-09 | 14 |
membranous layer | 2.63e-09 | 14 |
foregut | 4.16e-09 | 87 |
respiratory tract | 6.20e-09 | 54 |
subdivision of digestive tract | 1.78e-08 | 118 |
digestive system | 3.26e-08 | 145 |
digestive tract | 3.26e-08 | 145 |
primitive gut | 3.26e-08 | 145 |
subdivision of head | 8.58e-08 | 49 |
chordate pharynx | 1.66e-07 | 10 |
pharyngeal region of foregut | 1.66e-07 | 10 |
throat | 1.97e-07 | 2 |
major salivary gland | 2.30e-07 | 2 |
open tracheal system trachea | 2.77e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.