FFCP PHASE1:Hg19::chr12:108523435..108523467,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9671|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29117|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000551106_5end|coexpression_cluster_id=C11|description=CAGE_peak_3_at_WSCD2_5end|id=chr12:108523435..108523467,+|ontology_enrichment_celltype=CL:0002274!1.86e-10!5;CL:0000457!1.86e-10!5;CL:0002191!1.86e-10!5;CL:0000097!1.86e-10!5;CL:0000831!1.86e-10!5;CL:0002028!1.86e-10!5|ontology_enrichment_celltype_v019=CL:0000097;1.41e-09;5|ontology_enrichment_celltype_v019_2=CL:0000097,1.12e-09,5;CL:0002028,1.12e-09,5|ontology_enrichment_development_v019=UBERON:0006215;1.98e-16;3!UBERON:0006601;2.38e-09;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.61e-51!115;UBERON:0001049!2.58e-42!57;UBERON:0005068!2.58e-42!57;UBERON:0006241!2.58e-42!57;UBERON:0007135!2.58e-42!57;UBERON:0002616!6.03e-36!59;UBERON:0001017!2.60e-34!82;UBERON:0005743!4.33e-34!86;UBERON:0002619!1.79e-33!22;UBERON:0000955!1.48e-32!69;UBERON:0006238!1.48e-32!69;UBERON:0002780!2.09e-32!41;UBERON:0001890!2.09e-32!41;UBERON:0006240!2.09e-32!41;UBERON:0003075!2.72e-32!86;UBERON:0007284!2.72e-32!86;UBERON:0002346!4.77e-32!90;UBERON:0001893!4.83e-32!34;UBERON:0001869!1.25e-31!32;UBERON:0002020!1.64e-31!34;UBERON:0003528!1.64e-31!34;UBERON:0003080!1.94e-31!42;UBERON:0002791!2.56e-30!33;UBERON:0000073!1.20e-29!94;UBERON:0001016!1.20e-29!94;UBERON:0001950!1.52e-29!20;UBERON:0000956!7.49e-29!25;UBERON:0000203!7.49e-29!25;UBERON:0003056!2.51e-22!61;UBERON:0000153!1.91e-17!129;UBERON:0007811!1.91e-17!129;UBERON:0000033!1.30e-16!123;UBERON:0000924!2.84e-15!173;UBERON:0006601!2.84e-15!173;UBERON:0004121!5.08e-15!169;UBERON:0000200!9.33e-13!6;UBERON:0003076!9.84e-12!15;UBERON:0003057!9.84e-12!15;UBERON:0002021!7.42e-11!5;UBERON:0004733!7.10e-10!12;UBERON:0002028!7.10e-10!12;UBERON:0007277!7.10e-10!12;UBERON:0001871!2.04e-09!7;UBERON:0004732!5.47e-09!13;UBERON:0000025!8.62e-09!194;UBERON:0002680!7.39e-08!9;UBERON:0001895!7.39e-08!9;UBERON:0010092!7.39e-08!9;UBERON:0000349!1.68e-07!5;UBERON:0001872!1.95e-07!5;UBERON:0002771!3.61e-07!3|ontology_enrichment_uberon_v019=UBERON:0002619;1.08e-64;22!UBERON:0000956;9.58e-57;25!UBERON:0000203;9.58e-57;25!UBERON:0001950;1.03e-55;20!UBERON:0001869;1.31e-48;32!UBERON:0001893;8.92e-46;34!UBERON:0002791;3.86e-43;32!UBERON:0003528;6.26e-39;34!UBERON:0002020;6.26e-39;34!UBERON:0002780;1.81e-33;41!UBERON:0001890;1.81e-33;41!UBERON:0000073;1.29e-26;53!UBERON:0002616;1.29e-26;53!UBERON:0000200;4.97e-20;6!UBERON:0000955;3.07e-19;68!UBERON:0001017;3.72e-18;75!UBERON:0001871;6.73e-17;6!UBERON:0002021;5.70e-16;5!UBERON:0000349;5.70e-16;5!UBERON:0001872;6.41e-16;5!UBERON:0001016;7.72e-13;83!UBERON:0001954;3.86e-11;2!UBERON:0003022;3.86e-11;2!UBERON:0002421;3.86e-11;2!UBERON:0002600;3.86e-11;2!UBERON:0002771;3.45e-10;2!UBERON:0007023;1.01e-09;114!UBERON:0002037;1.99e-08;6!UBERON:0001870;1.59e-07;3!UBERON:0011216;3.23e-07;132!UBERON:0004733;6.48e-07;12!UBERON:0002028;6.48e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.16e-64,22;UBERON:0000956,1.02e-56,25;UBERON:0000203,1.02e-56,25;UBERON:0001950,1.14e-55,20;UBERON:0001869,2.07e-54,32;UBERON:0001893,4.93e-51,34;UBERON:0000073,7.26e-51,53;UBERON:0002616,7.26e-51,53;UBERON:0002791,5.99e-49,32;UBERON:0001049,6.94e-48,56;UBERON:0005068,6.94e-48,56;UBERON:0006241,6.94e-48,56;UBERON:0007135,6.94e-48,56;UBERON:0002780,3.67e-46,41;UBERON:0001890,3.67e-46,41;UBERON:0003080,3.67e-46,41;UBERON:0006240,3.67e-46,41;UBERON:0003528,6.74e-46,34;UBERON:0002020,6.74e-46,34;UBERON:0000955,1.24e-44,68;UBERON:0006238,1.24e-44,68;UBERON:0001017,1.06e-39,81;UBERON:0001016,3.34e-35,89;UBERON:0002346,8.88e-35,86;UBERON:0003075,6.18e-34,82;UBERON:0007284,6.18e-34,82;UBERON:0003056,6.92e-33,61;UBERON:0007023,1.79e-29,114;UBERON:0010371,1.41e-25,104;UBERON:0010314,2.05e-24,132;UBERON:0000200,7.43e-20,6;UBERON:0004121,1.55e-18,171;UBERON:0000924,1.55e-18,171;UBERON:0006601,1.55e-18,171;UBERON:0001871,7.86e-17,6;UBERON:0002021,3.81e-16,5;UBERON:0000349,4.81e-16,5;UBERON:0001872,6.81e-16,5;UBERON:0011216,1.16e-12,223;UBERON:0001954,3.68e-11,2;UBERON:0003022,3.68e-11,2;UBERON:0002421,3.68e-11,2;UBERON:0002600,3.68e-11,2;UBERON:0002771,3.45e-10,2;UBERON:0000025,3.91e-10,192;UBERON:0002037,1.99e-08,6;UBERON:0006215,1.99e-08,6;UBERON:0001870,1.93e-07,3;UBERON:0004111,4.87e-07,240;UBERON:0000483,6.01e-07,306;UBERON:0004733,7.28e-07,12;UBERON:0002028,7.28e-07,12;UBERON:0007277,7.28e-07,12;UBERON:0000119,8.04e-07,309|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29117 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000551106_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_WSCD2_5end | |||
|id=chr12:108523435..108523467,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.86e-10!5;CL:0000457!1.86e-10!5;CL:0002191!1.86e-10!5;CL:0000097!1.86e-10!5;CL:0000831!1.86e-10!5;CL:0002028!1.86e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.41e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.12e-09,5;CL:0002028,1.12e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.98e-16;3!UBERON:0006601;2.38e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.61e-51!115;UBERON:0001049!2.58e-42!57;UBERON:0005068!2.58e-42!57;UBERON:0006241!2.58e-42!57;UBERON:0007135!2.58e-42!57;UBERON:0002616!6.03e-36!59;UBERON:0001017!2.60e-34!82;UBERON:0005743!4.33e-34!86;UBERON:0002619!1.79e-33!22;UBERON:0000955!1.48e-32!69;UBERON:0006238!1.48e-32!69;UBERON:0002780!2.09e-32!41;UBERON:0001890!2.09e-32!41;UBERON:0006240!2.09e-32!41;UBERON:0003075!2.72e-32!86;UBERON:0007284!2.72e-32!86;UBERON:0002346!4.77e-32!90;UBERON:0001893!4.83e-32!34;UBERON:0001869!1.25e-31!32;UBERON:0002020!1.64e-31!34;UBERON:0003528!1.64e-31!34;UBERON:0003080!1.94e-31!42;UBERON:0002791!2.56e-30!33;UBERON:0000073!1.20e-29!94;UBERON:0001016!1.20e-29!94;UBERON:0001950!1.52e-29!20;UBERON:0000956!7.49e-29!25;UBERON:0000203!7.49e-29!25;UBERON:0003056!2.51e-22!61;UBERON:0000153!1.91e-17!129;UBERON:0007811!1.91e-17!129;UBERON:0000033!1.30e-16!123;UBERON:0000924!2.84e-15!173;UBERON:0006601!2.84e-15!173;UBERON:0004121!5.08e-15!169;UBERON:0000200!9.33e-13!6;UBERON:0003076!9.84e-12!15;UBERON:0003057!9.84e-12!15;UBERON:0002021!7.42e-11!5;UBERON:0004733!7.10e-10!12;UBERON:0002028!7.10e-10!12;UBERON:0007277!7.10e-10!12;UBERON:0001871!2.04e-09!7;UBERON:0004732!5.47e-09!13;UBERON:0000025!8.62e-09!194;UBERON:0002680!7.39e-08!9;UBERON:0001895!7.39e-08!9;UBERON:0010092!7.39e-08!9;UBERON:0000349!1.68e-07!5;UBERON:0001872!1.95e-07!5;UBERON:0002771!3.61e-07!3 | |||
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|short_description=p3@WSCD2 | |||
}} |
Revision as of 20:41, 10 September 2013
Short description: | p3@WSCD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_WSCD2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000551106_5end |
EntrezGene: | WSCD2 |
HGNC: | 29117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.12e-09 | 5 |
basophil mast progenitor cell | 1.12e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.