FFCP PHASE1:Hg19::chr12:12713961..12713976,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80824|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17909|TSSclassifier=S|UniProt=|association_with_transcript=34bp_to_ENST00000541207_5end|coexpression_cluster_id=C103|description=CAGE_peak_14_at_DUSP16_5end|id=chr12:12713961..12713976,-|ontology_enrichment_celltype=CL:0000791!1.62e-12!18;CL:0000789!1.62e-12!18;CL:0002420!1.62e-12!18;CL:0002419!1.62e-12!18;CL:0000790!1.62e-12!18;CL:0000624!6.18e-12!6;CL:0000838!3.58e-08!52;CL:0000084!3.96e-08!25;CL:0000827!3.96e-08!25;CL:0000542!6.37e-08!53;CL:0000051!6.37e-08!53|ontology_enrichment_celltype_v019=CL:0000624;8.75e-26;6!CL:0000182;1.30e-17;12!CL:0000815;5.16e-14;2!CL:0000792;5.16e-14;2!CL:0002677;5.16e-14;2!CL:0000791;8.06e-12;18!CL:0000789;8.06e-12;18!CL:0002419;8.06e-12;18!CL:0000898;1.25e-09;3!CL:0000084;2.36e-08;25|ontology_enrichment_celltype_v019_2=CL:0000624,4.27e-26,6;CL:0000182,1.53e-17,12;CL:0000815,5.17e-14,2;CL:0000792,5.17e-14,2;CL:0002677,5.17e-14,2;CL:0000791,7.04e-12,18;CL:0000789,7.04e-12,18;CL:0002420,7.04e-12,18;CL:0002419,7.04e-12,18;CL:0000790,7.04e-12,18;CL:0000898,1.25e-09,3;CL:0000084,2.15e-08,25;CL:0000827,2.15e-08,25|ontology_enrichment_development_v019=UBERON:0009497;3.10e-22;13!UBERON:0004161;2.02e-19;11!CL:0000790;8.06e-12;18!UBERON:0001041;3.74e-09;30!UBERON:0008425;3.20e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;1.56e-07;1!DOID:4549;1.56e-07;1!DOID:5861;1.56e-07;1!DOID:6496;1.56e-07;1|ontology_enrichment_disease_v019_2=DOID:3371,1.33e-07,1;DOID:4549,1.33e-07,1;DOID:5861,1.33e-07,1;DOID:6496,1.33e-07,1|ontology_enrichment_uberon=UBERON:0004921!3.44e-11!129;UBERON:0004185!3.44e-11!129;UBERON:0001041!9.97e-10!98;UBERON:0001007!2.37e-09!155;UBERON:0001555!2.37e-09!155;UBERON:0007026!2.37e-09!155;UBERON:0000077!4.62e-09!130;UBERON:0005057!6.79e-09!26;UBERON:0004119!3.17e-08!169;UBERON:0000925!3.17e-08!169;UBERON:0006595!3.17e-08!169;UBERON:0001557!6.49e-08!19;UBERON:0009497!5.10e-07!25;UBERON:0000015!5.10e-07!25;UBERON:0002423!5.10e-07!25;UBERON:0006235!5.10e-07!25;UBERON:0004161!5.10e-07!25;UBERON:0008835!6.40e-07!22;UBERON:0003894!6.40e-07!22|ontology_enrichment_uberon_v019=UBERON:0002107;3.72e-19;19!UBERON:0006925;3.72e-19;19!UBERON:0002423;3.56e-18;25!UBERON:0002365;7.74e-14;31!UBERON:0002330;7.74e-14;31!UBERON:0002368;1.97e-09;33!UBERON:0000949;8.18e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0008835,8.51e-21,22;UBERON:0003894,8.51e-21,22;UBERON:0009854,7.88e-20,23;UBERON:0002107,4.02e-19,19;UBERON:0006925,4.02e-19,19;UBERON:0008836,4.02e-19,19;UBERON:0007499,3.96e-18,25;UBERON:0009497,3.96e-18,25;UBERON:0000015,3.96e-18,25;UBERON:0002423,3.96e-18,25;UBERON:0006235,3.96e-18,25;UBERON:0004161,3.96e-18,25;UBERON:0009856,2.24e-17,26;UBERON:0002365,3.18e-14,31;UBERON:0002330,3.18e-14,31;UBERON:0002368,7.37e-10,35;UBERON:0003929,2.08e-09,54;UBERON:0002530,2.10e-08,59;UBERON:0000949,2.05e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.870627715885752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93419540227666,1.96505381374582,1.85041349099558,3.17654341242288,4.88883399950386,5.20792586308207,1.94826728407911,1.6711568532776,9.13278313171995,7.75368631042674,6.49929273036037,1.5370958367081,1.1705341280389,0,0.276350017785848,0.579606171470105,0.593146252648242,0.267540828089713,1.04535523804977,0.226618685395132,0.383220493601921,3.4362744548263,2.27717722817553,0.318565414324097,0,0,0.301150238155546,0.76791966692651,0,0.473554504088034,0,0.403213486449465,0,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.330881918197182,0.435758888184812,0,0,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0,1.77236972004421,0,0.614942192715568,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40035338437484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0,0.369254416383208,0,0,3.04335996948536,0,0.1972868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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17909 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=34bp_to_ENST00000541207_5end | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_14_at_DUSP16_5end | |||
|id=chr12:12713961..12713976,- | |||
|ontology_enrichment_celltype=CL:0000791!1.62e-12!18;CL:0000789!1.62e-12!18;CL:0002420!1.62e-12!18;CL:0002419!1.62e-12!18;CL:0000790!1.62e-12!18;CL:0000624!6.18e-12!6;CL:0000838!3.58e-08!52;CL:0000084!3.96e-08!25;CL:0000827!3.96e-08!25;CL:0000542!6.37e-08!53;CL:0000051!6.37e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000624;8.75e-26;6!CL:0000182;1.30e-17;12!CL:0000815;5.16e-14;2!CL:0000792;5.16e-14;2!CL:0002677;5.16e-14;2!CL:0000791;8.06e-12;18!CL:0000789;8.06e-12;18!CL:0002419;8.06e-12;18!CL:0000898;1.25e-09;3!CL:0000084;2.36e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.27e-26,6;CL:0000182,1.53e-17,12;CL:0000815,5.17e-14,2;CL:0000792,5.17e-14,2;CL:0002677,5.17e-14,2;CL:0000791,7.04e-12,18;CL:0000789,7.04e-12,18;CL:0002420,7.04e-12,18;CL:0002419,7.04e-12,18;CL:0000790,7.04e-12,18;CL:0000898,1.25e-09,3;CL:0000084,2.15e-08,25;CL:0000827,2.15e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.10e-22;13!UBERON:0004161;2.02e-19;11!CL:0000790;8.06e-12;18!UBERON:0001041;3.74e-09;30!UBERON:0008425;3.20e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.56e-07;1!DOID:4549;1.56e-07;1!DOID:5861;1.56e-07;1!DOID:6496;1.56e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.33e-07,1;DOID:4549,1.33e-07,1;DOID:5861,1.33e-07,1;DOID:6496,1.33e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.44e-11!129;UBERON:0004185!3.44e-11!129;UBERON:0001041!9.97e-10!98;UBERON:0001007!2.37e-09!155;UBERON:0001555!2.37e-09!155;UBERON:0007026!2.37e-09!155;UBERON:0000077!4.62e-09!130;UBERON:0005057!6.79e-09!26;UBERON:0004119!3.17e-08!169;UBERON:0000925!3.17e-08!169;UBERON:0006595!3.17e-08!169;UBERON:0001557!6.49e-08!19;UBERON:0009497!5.10e-07!25;UBERON:0000015!5.10e-07!25;UBERON:0002423!5.10e-07!25;UBERON:0006235!5.10e-07!25;UBERON:0004161!5.10e-07!25;UBERON:0008835!6.40e-07!22;UBERON:0003894!6.40e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.72e-19;19!UBERON:0006925;3.72e-19;19!UBERON:0002423;3.56e-18;25!UBERON:0002365;7.74e-14;31!UBERON:0002330;7.74e-14;31!UBERON:0002368;1.97e-09;33!UBERON:0000949;8.18e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,8.51e-21,22;UBERON:0003894,8.51e-21,22;UBERON:0009854,7.88e-20,23;UBERON:0002107,4.02e-19,19;UBERON:0006925,4.02e-19,19;UBERON:0008836,4.02e-19,19;UBERON:0007499,3.96e-18,25;UBERON:0009497,3.96e-18,25;UBERON:0000015,3.96e-18,25;UBERON:0002423,3.96e-18,25;UBERON:0006235,3.96e-18,25;UBERON:0004161,3.96e-18,25;UBERON:0009856,2.24e-17,26;UBERON:0002365,3.18e-14,31;UBERON:0002330,3.18e-14,31;UBERON:0002368,7.37e-10,35;UBERON:0003929,2.08e-09,54;UBERON:0002530,2.10e-08,59;UBERON:0000949,2.05e-07,45 | |||
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|short_description=p14@DUSP16 | |||
}} |
Revision as of 21:39, 10 September 2013
Short description: | p14@DUSP16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_DUSP16_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 34bp_to_ENST00000541207_5end |
EntrezGene: | DUSP16 |
HGNC: | 17909 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.27e-26 | 6 |
hepatocyte | 1.53e-17 | 12 |
regulatory T cell | 5.17e-14 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.17e-14 | 2 |
naive regulatory T cell | 5.17e-14 | 2 |
mature alpha-beta T cell | 7.04e-12 | 18 |
alpha-beta T cell | 7.04e-12 | 18 |
immature T cell | 7.04e-12 | 18 |
mature T cell | 7.04e-12 | 18 |
immature alpha-beta T cell | 7.04e-12 | 18 |
naive T cell | 1.25e-09 | 3 |
T cell | 2.15e-08 | 25 |
pro-T cell | 2.15e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 8.51e-21 | 22 |
liver primordium | 8.51e-21 | 22 |
digestive tract diverticulum | 7.88e-20 | 23 |
liver | 4.02e-19 | 19 |
digestive gland | 4.02e-19 | 19 |
liver bud | 4.02e-19 | 19 |
epithelial sac | 3.96e-18 | 25 |
epithelium of foregut-midgut junction | 3.96e-18 | 25 |
anatomical boundary | 3.96e-18 | 25 |
hepatobiliary system | 3.96e-18 | 25 |
foregut-midgut junction | 3.96e-18 | 25 |
septum transversum | 3.96e-18 | 25 |
sac | 2.24e-17 | 26 |
exocrine gland | 3.18e-14 | 31 |
exocrine system | 3.18e-14 | 31 |
endocrine gland | 7.37e-10 | 35 |
gut epithelium | 2.08e-09 | 54 |
gland | 2.10e-08 | 59 |
endocrine system | 2.05e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.33e-07 | 1 |
extraosseous chondrosarcoma | 1.33e-07 | 1 |
myxoid chondrosarcoma | 1.33e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 1.33e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.