FFCP PHASE1:Hg19::chr12:279773..279812,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C368|description=CAGE_peak_at_chr12:279773..279812,+|id=chr12:279773..279812,+|ontology_enrichment_celltype=CL:0000708!4.10e-08!3;CL:0000064!9.20e-07!3;CL:0005012!9.20e-07!3;CL:0000067!9.20e-07!3;CL:0002304!9.20e-07!3|ontology_enrichment_celltype_v019=CL:0002575;1.29e-26;2!CL:0002549;1.12e-25;2!CL:0000708;6.51e-18;3!CL:0000669;8.06e-14;4!CL:0002262;1.99e-07;2!CL:1000398;1.99e-07;2|ontology_enrichment_celltype_v019_2=CL:0002575,1.29e-26,2;CL:0002549,1.44e-25,2;CL:0000708,6.52e-18,3;CL:0000669,8.06e-14,4;CL:0002262,1.75e-07,2;CL:1000398,1.75e-07,2|ontology_enrichment_development_v019=UBERON:0010227;8.05e-14;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002616!1.79e-33!59;UBERON:0001017!4.32e-29!82;UBERON:0000955!1.43e-28!69;UBERON:0006238!1.43e-28!69;UBERON:0005743!3.07e-27!86;UBERON:0001049!8.85e-26!57;UBERON:0005068!8.85e-26!57;UBERON:0006241!8.85e-26!57;UBERON:0007135!8.85e-26!57;UBERON:0007023!3.24e-25!115;UBERON:0000073!4.54e-25!94;UBERON:0001016!4.54e-25!94;UBERON:0001893!2.99e-23!34;UBERON:0002780!2.14e-22!41;UBERON:0001890!2.14e-22!41;UBERON:0006240!2.14e-22!41;UBERON:0003075!4.28e-22!86;UBERON:0007284!4.28e-22!86;UBERON:0002791!7.26e-22!33;UBERON:0003080!1.03e-21!42;UBERON:0002020!2.66e-21!34;UBERON:0003528!2.66e-21!34;UBERON:0002346!1.15e-20!90;UBERON:0001869!1.40e-20!32;UBERON:0000153!3.72e-20!129;UBERON:0007811!3.72e-20!129;UBERON:0002619!6.56e-20!22;UBERON:0000956!1.66e-19!25;UBERON:0000203!1.66e-19!25;UBERON:0001950!2.41e-19!20;UBERON:0000033!3.15e-19!123;UBERON:0003056!1.19e-18!61;UBERON:0004121!6.19e-17!169;UBERON:0000924!3.00e-16!173;UBERON:0006601!3.00e-16!173;UBERON:0001871!5.73e-13!7;UBERON:0000477!6.98e-11!286;UBERON:0000119!2.71e-09!312;UBERON:0002200!3.51e-09!11;UBERON:0006876!3.51e-09!11;UBERON:0000025!2.54e-08!194;UBERON:0003210!4.10e-08!3;UBERON:0005284!4.88e-08!5;UBERON:0004111!6.97e-08!241;UBERON:0000483!1.03e-07!309;UBERON:0002771!2.39e-07!3;UBERON:0004733!3.45e-07!12;UBERON:0002028!3.45e-07!12;UBERON:0007277!3.45e-07!12;UBERON:0001778!9.20e-07!3;UBERON:0001775!9.20e-07!3|ontology_enrichment_uberon_v019=UBERON:0005629;1.12e-25;2!UBERON:0005358;1.12e-25;2!UBERON:0001886;1.12e-25;2!UBERON:0004086;1.12e-25;2!UBERON:0005282;1.12e-25;2!UBERON:0005281;1.12e-25;2!UBERON:0005284;5.45e-23;5!UBERON:0003210;6.51e-18;3!UBERON:0002079;8.05e-14;1!UBERON:0002108;7.70e-11;4!UBERON:0006876;8.54e-11;11!UBERON:0002081;1.50e-07;2!UBERON:0000341;1.99e-07;2!UBERON:0001281;1.99e-07;2!UBERON:0003497;1.99e-07;2!UBERON:0003909;1.99e-07;2!UBERON:0003835;1.99e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.44e-25,2;UBERON:0005358,1.44e-25,2;UBERON:0001886,1.44e-25,2;UBERON:0004086,1.44e-25,2;UBERON:0005282,1.44e-25,2;UBERON:0005281,1.44e-25,2;UBERON:0005284,6.34e-23,5;UBERON:0003210,6.52e-18,3;UBERON:0002079,8.58e-14,1;UBERON:0002108,6.47e-11,4;UBERON:0006876,9.13e-11,11;UBERON:0002081,1.54e-07,2;UBERON:0010227,1.54e-07,2;UBERON:0001281,1.75e-07,2;UBERON:0003497,1.75e-07,2;UBERON:0003909,1.75e-07,2;UBERON:0003835,1.75e-07,2;UBERON:0000341,2.12e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,1.22031028774085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08665054641315,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0144115681237,0.43596006883328,6.4537691522436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,256.107913961265,80.6387045955511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21021717103534,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_at_chr12:279773..279812,+ | |||
|id=chr12:279773..279812,+ | |||
|ontology_enrichment_celltype=CL:0000708!4.10e-08!3;CL:0000064!9.20e-07!3;CL:0005012!9.20e-07!3;CL:0000067!9.20e-07!3;CL:0002304!9.20e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002575;1.29e-26;2!CL:0002549;1.12e-25;2!CL:0000708;6.51e-18;3!CL:0000669;8.06e-14;4!CL:0002262;1.99e-07;2!CL:1000398;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.29e-26,2;CL:0002549,1.44e-25,2;CL:0000708,6.52e-18,3;CL:0000669,8.06e-14,4;CL:0002262,1.75e-07,2;CL:1000398,1.75e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;8.05e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.79e-33!59;UBERON:0001017!4.32e-29!82;UBERON:0000955!1.43e-28!69;UBERON:0006238!1.43e-28!69;UBERON:0005743!3.07e-27!86;UBERON:0001049!8.85e-26!57;UBERON:0005068!8.85e-26!57;UBERON:0006241!8.85e-26!57;UBERON:0007135!8.85e-26!57;UBERON:0007023!3.24e-25!115;UBERON:0000073!4.54e-25!94;UBERON:0001016!4.54e-25!94;UBERON:0001893!2.99e-23!34;UBERON:0002780!2.14e-22!41;UBERON:0001890!2.14e-22!41;UBERON:0006240!2.14e-22!41;UBERON:0003075!4.28e-22!86;UBERON:0007284!4.28e-22!86;UBERON:0002791!7.26e-22!33;UBERON:0003080!1.03e-21!42;UBERON:0002020!2.66e-21!34;UBERON:0003528!2.66e-21!34;UBERON:0002346!1.15e-20!90;UBERON:0001869!1.40e-20!32;UBERON:0000153!3.72e-20!129;UBERON:0007811!3.72e-20!129;UBERON:0002619!6.56e-20!22;UBERON:0000956!1.66e-19!25;UBERON:0000203!1.66e-19!25;UBERON:0001950!2.41e-19!20;UBERON:0000033!3.15e-19!123;UBERON:0003056!1.19e-18!61;UBERON:0004121!6.19e-17!169;UBERON:0000924!3.00e-16!173;UBERON:0006601!3.00e-16!173;UBERON:0001871!5.73e-13!7;UBERON:0000477!6.98e-11!286;UBERON:0000119!2.71e-09!312;UBERON:0002200!3.51e-09!11;UBERON:0006876!3.51e-09!11;UBERON:0000025!2.54e-08!194;UBERON:0003210!4.10e-08!3;UBERON:0005284!4.88e-08!5;UBERON:0004111!6.97e-08!241;UBERON:0000483!1.03e-07!309;UBERON:0002771!2.39e-07!3;UBERON:0004733!3.45e-07!12;UBERON:0002028!3.45e-07!12;UBERON:0007277!3.45e-07!12;UBERON:0001778!9.20e-07!3;UBERON:0001775!9.20e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.12e-25;2!UBERON:0005358;1.12e-25;2!UBERON:0001886;1.12e-25;2!UBERON:0004086;1.12e-25;2!UBERON:0005282;1.12e-25;2!UBERON:0005281;1.12e-25;2!UBERON:0005284;5.45e-23;5!UBERON:0003210;6.51e-18;3!UBERON:0002079;8.05e-14;1!UBERON:0002108;7.70e-11;4!UBERON:0006876;8.54e-11;11!UBERON:0002081;1.50e-07;2!UBERON:0000341;1.99e-07;2!UBERON:0001281;1.99e-07;2!UBERON:0003497;1.99e-07;2!UBERON:0003909;1.99e-07;2!UBERON:0003835;1.99e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.44e-25,2;UBERON:0005358,1.44e-25,2;UBERON:0001886,1.44e-25,2;UBERON:0004086,1.44e-25,2;UBERON:0005282,1.44e-25,2;UBERON:0005281,1.44e-25,2;UBERON:0005284,6.34e-23,5;UBERON:0003210,6.52e-18,3;UBERON:0002079,8.58e-14,1;UBERON:0002108,6.47e-11,4;UBERON:0006876,9.13e-11,11;UBERON:0002081,1.54e-07,2;UBERON:0010227,1.54e-07,2;UBERON:0001281,1.75e-07,2;UBERON:0003497,1.75e-07,2;UBERON:0003909,1.75e-07,2;UBERON:0003835,1.75e-07,2;UBERON:0000341,2.12e-07,2 | |||
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|short_description=p@chr12:279773..279812,+ | |||
}} |
Revision as of 22:20, 10 September 2013
Short description: | p@chr12:279773..279812, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:279773..279812, + |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.29e-26 | 2 |
fibroblast of choroid plexus | 1.44e-25 | 2 |
leptomeningeal cell | 6.52e-18 | 3 |
pericyte cell | 8.06e-14 | 4 |
endothelial cell of sinusoid | 1.75e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.44e-25 | 2 |
ventricle of nervous system | 1.44e-25 | 2 |
choroid plexus | 1.44e-25 | 2 |
brain ventricle | 1.44e-25 | 2 |
ventricular system of brain | 1.44e-25 | 2 |
ventricular system of central nervous system | 1.44e-25 | 2 |
brain vasculature | 6.34e-23 | 5 |
blood-cerebrospinal fluid barrier | 6.52e-18 | 3 |
left cardiac atrium | 8.58e-14 | 1 |
small intestine | 6.47e-11 | 4 |
vasculature of organ | 9.13e-11 | 11 |
cardiac atrium | 1.54e-07 | 2 |
future cardiac atrium | 1.54e-07 | 2 |
hepatic sinusoid | 1.75e-07 | 2 |
abdomen blood vessel | 1.75e-07 | 2 |
sinusoid | 1.75e-07 | 2 |
abdominal segment blood vessel | 1.75e-07 | 2 |
throat | 2.12e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.