FFCP PHASE1:Hg19::chr12:6233727..6233738,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7450|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12726|TSSclassifier=S|UniProt=|association_with_transcript=92bp_to_ENST00000540192_5end|coexpression_cluster_id=C428|description=CAGE_peak_5_at_VWF_5end|id=chr12:6233727..6233738,-|ontology_enrichment_celltype=CL:0002139!1.71e-31!24;CL:0000115!2.99e-29!35;CL:0000071!1.48e-23!18;CL:0002546!1.48e-23!18;CL:0002078!6.70e-21!44;CL:0000213!1.11e-13!57;CL:0000215!1.11e-13!57;CL:1000413!2.18e-12!9;CL:0005020!1.78e-09!6;CL:0002138!1.78e-09!6;CL:0005022!1.78e-09!6;CL:0002543!6.36e-09!6;CL:0002544!9.67e-09!6|ontology_enrichment_celltype_v019=CL:0002139;9.84e-39;24!CL:0000115;4.80e-32;36!CL:0000071;7.49e-29;18!CL:0002078;3.33e-18;45!CL:1000413;5.26e-15;9!CL:0000213;1.37e-12;58!CL:0000215;1.37e-12;58!CL:0002138;2.16e-11;6!CL:0002543;1.15e-10;6!CL:0002544;1.71e-10;6|ontology_enrichment_celltype_v019_2=CL:0002139,1.02e-38,24;CL:0000115,5.84e-38,36;CL:0000071,7.45e-29,18;CL:0002546,7.45e-29,18;CL:0002078,3.76e-28,45;CL:0000213,1.81e-19,58;CL:0000215,1.81e-19,58;CL:1000413,5.53e-15,9;CL:0005020,2.25e-11,6;CL:0002138,2.25e-11,6;CL:0005022,2.25e-11,6;CL:0002543,1.09e-10,6;CL:0002544,1.83e-10,6|ontology_enrichment_development_v019=CL:0002546;7.49e-29;18!CL:0005022;2.16e-11;6!UBERON:0004872;1.46e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.32e-69!115;UBERON:0004111!7.13e-26!241;UBERON:0001049!2.50e-25!57;UBERON:0005068!2.50e-25!57;UBERON:0006241!2.50e-25!57;UBERON:0007135!2.50e-25!57;UBERON:0001986!1.48e-23!18;UBERON:0004638!1.48e-23!18;UBERON:0004852!1.48e-23!18;UBERON:0000477!2.10e-22!286;UBERON:0000025!6.66e-22!194;UBERON:0003080!8.82e-22!42;UBERON:0002780!8.02e-21!41;UBERON:0001890!8.02e-21!41;UBERON:0006240!8.02e-21!41;UBERON:0002616!3.32e-20!59;UBERON:0000955!3.66e-19!69;UBERON:0006238!3.66e-19!69;UBERON:0001017!7.50e-19!82;UBERON:0005743!2.15e-18!86;UBERON:0003075!2.23e-18!86;UBERON:0007284!2.23e-18!86;UBERON:0000487!5.26e-18!22;UBERON:0002346!6.69e-17!90;UBERON:0001893!1.30e-16!34;UBERON:0002020!1.54e-16!34;UBERON:0003528!1.54e-16!34;UBERON:0000073!5.19e-16!94;UBERON:0001016!5.19e-16!94;UBERON:0002791!6.21e-16!33;UBERON:0001869!4.68e-15!32;UBERON:0006914!4.87e-15!25;UBERON:0003056!6.89e-13!61;UBERON:0002619!7.60e-13!22;UBERON:0003915!2.18e-12!9;UBERON:0004700!2.18e-12!9;UBERON:0001917!2.18e-12!9;UBERON:0000483!7.73e-12!309;UBERON:0000153!1.35e-11!129;UBERON:0007811!1.35e-11!129;UBERON:0001950!1.70e-11!20;UBERON:0000119!1.78e-11!312;UBERON:0000055!2.63e-11!69;UBERON:0000956!1.01e-10!25;UBERON:0000203!1.01e-10!25;UBERON:0000033!2.99e-10!123;UBERON:0002049!1.25e-08!79;UBERON:0007798!1.25e-08!79;UBERON:0000468!1.27e-08!659;UBERON:0001009!1.64e-08!113;UBERON:0002465!1.98e-08!10;UBERON:0004121!2.80e-08!169;UBERON:0004872!2.82e-08!84;UBERON:0002298!6.32e-08!8;UBERON:0001981!6.57e-08!60;UBERON:0007500!6.57e-08!60;UBERON:0004537!6.57e-08!60;UBERON:0006965!6.57e-08!60;UBERON:0000924!9.29e-08!173;UBERON:0006601!9.29e-08!173;UBERON:0000467!9.80e-08!625;UBERON:0000480!1.16e-07!626;UBERON:0002308!1.20e-07!9;UBERON:0000125!1.20e-07!9;UBERON:0001638!1.96e-07!9;UBERON:0003920!1.96e-07!9;UBERON:0004582!1.96e-07!9;UBERON:0004535!4.29e-07!110;UBERON:0001473!9.80e-07!8;UBERON:0004536!9.80e-07!8;UBERON:0006558!9.80e-07!8|ontology_enrichment_uberon_v019=UBERON:0004638;7.49e-29;18!UBERON:0001986;7.49e-29;18!UBERON:0004852;7.49e-29;18!UBERON:0000487;1.90e-22;22!UBERON:0006914;5.23e-19;25!UBERON:0003915;5.26e-15;9!UBERON:0004700;5.26e-15;9!UBERON:0001917;5.26e-15;9!UBERON:0007023;1.57e-13;114!UBERON:0000490;5.01e-12;33!UBERON:0002465;3.38e-10;10!UBERON:0001638;4.64e-09;9!UBERON:0003920;4.64e-09;9!UBERON:0004582;4.64e-09;9!UBERON:0002619;4.83e-09;22!UBERON:0001893;5.53e-09;34!UBERON:0001950;7.87e-09;20!UBERON:0000055;1.09e-08;65!UBERON:0003528;1.55e-08;34!UBERON:0002020;1.55e-08;34!UBERON:0002780;2.14e-08;41!UBERON:0001890;2.14e-08;41!UBERON:0001473;3.16e-08;8!UBERON:0004536;3.16e-08;8!UBERON:0006558;3.16e-08;8!UBERON:0001869;4.90e-08;32!UBERON:0000073;4.97e-08;53!UBERON:0002616;4.97e-08;53!UBERON:0002791;4.99e-08;32!UBERON:0000956;1.32e-07;25!UBERON:0000203;1.32e-07;25!UBERON:0002298;2.24e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.37e-53,114;UBERON:0004638,7.45e-29,18;UBERON:0001986,7.45e-29,18;UBERON:0004852,7.45e-29,18;UBERON:0004111,7.42e-23,240;UBERON:0000487,1.90e-22,22;UBERON:0006914,5.21e-19,25;UBERON:0000025,3.60e-17,192;UBERON:0000055,3.42e-16,68;UBERON:0003915,5.53e-15,9;UBERON:0004700,5.53e-15,9;UBERON:0001917,5.53e-15,9;UBERON:0002049,7.61e-13,78;UBERON:0007798,7.61e-13,78;UBERON:0001049,1.17e-12,56;UBERON:0005068,1.17e-12,56;UBERON:0006241,1.17e-12,56;UBERON:0007135,1.17e-12,56;UBERON:0000073,1.10e-11,53;UBERON:0002616,1.10e-11,53;UBERON:0007500,1.71e-11,59;UBERON:0001981,1.71e-11,59;UBERON:0004537,1.71e-11,59;UBERON:0006965,1.71e-11,59;UBERON:0001009,2.67e-11,112;UBERON:0004872,6.38e-11,83;UBERON:0001893,1.71e-10,34;UBERON:0003528,1.98e-10,34;UBERON:0002020,1.98e-10,34;UBERON:0002465,2.58e-10,10;UBERON:0002780,8.56e-10,41;UBERON:0001890,8.56e-10,41;UBERON:0003080,8.56e-10,41;UBERON:0006240,8.56e-10,41;UBERON:0003075,1.70e-09,82;UBERON:0007284,1.70e-09,82;UBERON:0004535,1.93e-09,109;UBERON:0001638,4.45e-09,9;UBERON:0003920,4.45e-09,9;UBERON:0004582,4.45e-09,9;UBERON:0002791,5.26e-09,32;UBERON:0000955,5.47e-09,68;UBERON:0006238,5.47e-09,68;UBERON:0001869,5.90e-09,32;UBERON:0002619,7.28e-09,22;UBERON:0000483,7.45e-09,306;UBERON:0002346,1.12e-08,86;UBERON:0000119,1.36e-08,309;UBERON:0001950,1.37e-08,20;UBERON:0001017,1.56e-08,81;UBERON:0001473,3.26e-08,8;UBERON:0004536,3.26e-08,8;UBERON:0006558,3.26e-08,8;UBERON:0010314,3.60e-08,132;UBERON:0000956,1.88e-07,25;UBERON:0000203,1.88e-07,25;UBERON:0003914,2.57e-07,117;UBERON:0002298,3.24e-07,6;UBERON:0003887,3.62e-07,12;UBERON:0001016,5.91e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90810750907073,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0,0,0,0,0,0,0,0,4.32230949142452,0,0,0,0,0,0,0,0,10.7331699978021,5.16140757063675,9.71993404501264,7.34900324501212,10.0679864690377,18.9831448938647,8.77778859454604,73.6487763632587,49.8072767761394,64.6010782635814,23.7669297094397,12.1643536914962,53.4495906030491,13.971197053143,41.3172393419697,17.2348475588274,14.3698798480749,6.64407734851601,6.13266549863533,22.7823758296351,17.2209639294583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530119073285941,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2394200017423,11.2193419042757,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,22.0880665074443,17.1304639653346,22.4499899636826,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,2.28015329005615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1973414513435,4.08224892663638,5.39789790255348,104.874531829397,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0.411362273086194,0,1.62009431171434,0,0,0,0,0,0,0,0,0,11.1073114676773,0.635020748171649,0,0.561594356226918,0,0,0,3.72441911163527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8228833613646,0,0,0,0,0,0,0,1.26602474769461,0,0,0,3.98495976502139,1.93398740871803,0,0,0,0,0,0,0,2.56472854656027,0,0,0.969332746095218,1.39152147242777,3.99227596002388,0,0,5.07499702804355,0,0,0,0,0,0,0.885741385813839,1.32656082487949,0,0.884634079449797,0,0.87754158861589,0,0,5.46346835376959,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0.995261931078505,2.12298154808014,1.83309043480088,0,0,0,2.69604531922708,7.2231988256891,0.702793337176017,0,0,0,2.36750641709634,2.41981432097328,0.91821828489147,6.00272506470636,0,0,0,0,0,0,0,0,0,0,0,7.68797340264933,0,0,0,0,2.90967049465258,0,3.38971111170799,0,0,2.15256706249988,0,0,4.26905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.23214841002794,0,0,0,3.6306712165393,7.56229399238556,6.46085722119133,5.39133301347276,8.58452096273142,4.68660060627932,6.11369599629209,0,0,0,0,0,0,0,0.795229689809303,1.90684768556206,0,0,0,0,0,1.45798935979259,0,0.551639951094387,0.996637174564964,0,0,0,11.4351252219739,9.93137955548147,0,0,0,0,0,0,0,0,0.293104467356165,0,2.06852730178481,1.19009341568421,0,0,9.82444195622791,7.70301094988363,11.1844544943743,2.97699613087171,0,0,0,3.26410682021684,7.7713867147037,1.83807346058077,2.95085367638824,0,0,0.610131324509816,1.1267183763585,1.14681839138014,1.66393577305278,2.85643453530364,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,2.11956442818316,0,1.91560630868582,1.23069818544453,0.504143392443436,1.52145955421279,1.93770774758221,0,0,0,0,0,0,0,0,2.93320280562103,0,0,0,0,0,1.35075169236789,0.781078098613847,1.44680757550829,1.33173201407204,2.18789923607288,2.74128883428591,7.44316767583941,0,0,1.07140367175657,0.672567444437648,0.606965604236632,0.455324382702595,7.98321331463749,0,0,1.76721305739762,1.77586488619693,0,0,3.61068227112365,0.314231179832004,0,0.913158720509496,0,0,3.71678029718613,0,0,0,0,0,0,0,1.29068207646083,0,0,1.27016115057279,0,0,0,0,0,0,2.58971534875158,4.61982630853112,4.6392577253528,3.39997695141398,0,0,0,0,0,0,1.08043821351123,1.74847648403166,0,4.4126697915703,0,0.981542335574726,1.48523200163543,1.6906229103336,0,2.349597949496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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7450 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12726 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=92bp_to_ENST00000540192_5end | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_5_at_VWF_5end | |||
|id=chr12:6233727..6233738,- | |||
|ontology_enrichment_celltype=CL:0002139!1.71e-31!24;CL:0000115!2.99e-29!35;CL:0000071!1.48e-23!18;CL:0002546!1.48e-23!18;CL:0002078!6.70e-21!44;CL:0000213!1.11e-13!57;CL:0000215!1.11e-13!57;CL:1000413!2.18e-12!9;CL:0005020!1.78e-09!6;CL:0002138!1.78e-09!6;CL:0005022!1.78e-09!6;CL:0002543!6.36e-09!6;CL:0002544!9.67e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.84e-39;24!CL:0000115;4.80e-32;36!CL:0000071;7.49e-29;18!CL:0002078;3.33e-18;45!CL:1000413;5.26e-15;9!CL:0000213;1.37e-12;58!CL:0000215;1.37e-12;58!CL:0002138;2.16e-11;6!CL:0002543;1.15e-10;6!CL:0002544;1.71e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.02e-38,24;CL:0000115,5.84e-38,36;CL:0000071,7.45e-29,18;CL:0002546,7.45e-29,18;CL:0002078,3.76e-28,45;CL:0000213,1.81e-19,58;CL:0000215,1.81e-19,58;CL:1000413,5.53e-15,9;CL:0005020,2.25e-11,6;CL:0002138,2.25e-11,6;CL:0005022,2.25e-11,6;CL:0002543,1.09e-10,6;CL:0002544,1.83e-10,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.49e-29;18!CL:0005022;2.16e-11;6!UBERON:0004872;1.46e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@VWF | |||
}} |
Revision as of 23:48, 10 September 2013
Short description: | p5@VWF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_VWF_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 92bp_to_ENST00000540192_5end |
EntrezGene: | VWF |
HGNC: | 12726 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.02e-38 | 24 |
endothelial cell | 5.84e-38 | 36 |
blood vessel endothelial cell | 7.45e-29 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.45e-29 | 18 |
meso-epithelial cell | 3.76e-28 | 45 |
lining cell | 1.81e-19 | 58 |
barrier cell | 1.81e-19 | 58 |
endothelial cell of artery | 5.53e-15 | 9 |
lymphangioblast | 2.25e-11 | 6 |
endothelial cell of lymphatic vessel | 2.25e-11 | 6 |
vascular lymphangioblast | 2.25e-11 | 6 |
vein endothelial cell | 1.09e-10 | 6 |
aortic endothelial cell | 1.83e-10 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.