FFCP PHASE1:Hg19::chr12:80084018..80084035,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5074 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8614 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-158bp_to_ENST00000551712_5end | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_17_at_PAWR_5end | |||
|id=chr12:80084018..80084035,- | |||
|ontology_enrichment_celltype=CL:0002139!4.37e-20!24;CL:0000213!1.76e-18!57;CL:0000215!1.76e-18!57;CL:0000071!3.00e-15!18;CL:0002546!3.00e-15!18;CL:0000115!3.60e-15!35;CL:0002078!3.95e-13!44;CL:0000076!5.83e-12!62;CL:0000066!2.08e-11!254;CL:0000222!1.92e-08!119;CL:1000413!2.85e-08!9 | |||
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|ontology_enrichment_development_v019=CL:0002546;2.48e-76;18!CL:0005022;9.26e-31;6!CL:0000222;2.30e-10;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:201;3.87e-08;6!DOID:0060100;3.87e-08;6!DOID:3371;9.90e-07;1!DOID:4549;9.90e-07;1!DOID:5861;9.90e-07;1!DOID:6496;9.90e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:201,4.07e-08,6;DOID:0060100,4.07e-08,6;DOID:3371,9.91e-07,1;DOID:4549,9.91e-07,1;DOID:5861,9.91e-07,1;DOID:6496,9.91e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!3.00e-15!18;UBERON:0004638!3.00e-15!18;UBERON:0004852!3.00e-15!18;UBERON:0000487!2.41e-13!22;UBERON:0006914!9.37e-12!25;UBERON:0002049!3.38e-09!79;UBERON:0007798!3.38e-09!79;UBERON:0000477!7.04e-09!286;UBERON:0000055!1.92e-08!69;UBERON:0003915!2.85e-08!9;UBERON:0004700!2.85e-08!9;UBERON:0001917!2.85e-08!9 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.30e-76,18;UBERON:0001986,2.30e-76,18;UBERON:0004852,2.30e-76,18;UBERON:0000487,8.90e-62,22;UBERON:0006914,6.74e-54,25;UBERON:0000055,5.11e-34,68;UBERON:0003915,6.64e-34,9;UBERON:0004700,6.64e-34,9;UBERON:0001917,6.64e-34,9;UBERON:0002049,5.65e-29,78;UBERON:0007798,5.65e-29,78;UBERON:0001473,5.12e-23,8;UBERON:0004536,5.12e-23,8;UBERON:0006558,5.12e-23,8;UBERON:0007500,1.36e-20,59;UBERON:0001981,1.36e-20,59;UBERON:0004537,1.36e-20,59;UBERON:0006965,1.36e-20,59;UBERON:0001638,8.63e-20,9;UBERON:0003920,8.63e-20,9;UBERON:0004582,8.63e-20,9;UBERON:0004535,3.16e-19,109;UBERON:0001009,1.43e-18,112;UBERON:0002465,2.71e-18,10;UBERON:0010523,6.34e-16,3;UBERON:0001915,6.34e-16,3;UBERON:0001982,6.34e-16,3;UBERON:0003914,7.56e-14,117;UBERON:0004872,1.56e-13,83;UBERON:0005800,2.34e-11,2;UBERON:0001515,2.34e-11,2;UBERON:0010532,3.86e-11,7;UBERON:0000074,3.86e-11,7;UBERON:0001229,3.86e-11,7;UBERON:0001230,3.86e-11,7;UBERON:0003220,3.86e-11,7;UBERON:0005749,3.86e-11,7;UBERON:0004199,3.86e-11,7;UBERON:0004209,3.86e-11,7;UBERON:0004198,3.86e-11,7;UBERON:0004111,4.47e-11,240;UBERON:0002066,5.59e-10,5;UBERON:0005103,9.20e-10,8;UBERON:0000083,9.20e-10,8;UBERON:0009201,9.20e-10,8;UBERON:0006553,9.20e-10,8;UBERON:0003074,9.20e-10,8;UBERON:0003060,9.20e-10,8;UBERON:0000080,1.09e-08,9;UBERON:0002120,1.09e-08,9;UBERON:0004875,1.09e-08,9;UBERON:0005721,1.09e-08,9;UBERON:0005754,1.09e-08,9;UBERON:0007297,1.09e-08,9;UBERON:0001851,9.96e-08,15;UBERON:0000025,1.88e-07,192;UBERON:0004876,4.00e-07,11;UBERON:0000490,7.22e-07,148;UBERON:0003081,8.73e-07,203 | |||
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| |||
|short_description=p17@PAWR | |||
}} |
Revision as of 00:36, 11 September 2013
Short description: | p17@PAWR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_PAWR_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | -158bp_to_ENST00000551712_5end |
EntrezGene: | PAWR |
HGNC: | 8614 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.13e-106 | 24 |
endothelial cell | 1.94e-95 | 36 |
meso-epithelial cell | 7.52e-81 | 45 |
blood vessel endothelial cell | 2.30e-76 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.30e-76 | 18 |
lining cell | 8.35e-71 | 58 |
barrier cell | 8.35e-71 | 58 |
endothelial cell of artery | 6.64e-34 | 9 |
lymphangioblast | 7.05e-31 | 6 |
endothelial cell of lymphatic vessel | 7.05e-31 | 6 |
vascular lymphangioblast | 7.05e-31 | 6 |
mesodermal cell | 1.47e-30 | 121 |
vein endothelial cell | 5.86e-30 | 6 |
squamous epithelial cell | 8.05e-27 | 63 |
aortic endothelial cell | 4.57e-21 | 6 |
endothelial cell of umbilical vein | 2.55e-16 | 3 |
capillary endothelial cell | 6.34e-16 | 3 |
glomerular endothelial cell | 1.55e-15 | 5 |
epithelial cell | 2.01e-14 | 253 |
embryonic cell | 2.69e-12 | 250 |
thoracic aorta endothelial cell | 2.34e-11 | 2 |
glomerular cell | 3.86e-11 | 7 |
kidney corpuscule cell | 3.86e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 4.07e-08 | 6 |
musculoskeletal system cancer | 4.07e-08 | 6 |
chondrosarcoma | 9.91e-07 | 1 |
extraosseous chondrosarcoma | 9.91e-07 | 1 |
myxoid chondrosarcoma | 9.91e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 9.91e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.