FFCP PHASE1:Hg19::chr13:110895063..110895095,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:110895063..110895095,-|id=chr13:110895063..110895095,-|ontology_enrichment_celltype=CL:0000222!1.17e-08!119;CL:0000136!1.40e-07!15;CL:0002139!5.77e-07!24|ontology_enrichment_celltype_v019=CL:0002138;2.99e-11;6!CL:0000136;7.27e-10;13!CL:1000746;7.76e-10;7!CL:1000612;7.76e-10;7!CL:0002615;1.55e-09;3!CL:0002188;5.15e-09;5!CL:0000115;7.88e-09;36!CL:0002139;9.27e-08;24!CL:0000669;2.44e-07;4!CL:0002575;5.34e-07;2!CL:0002617;7.67e-07;2|ontology_enrichment_celltype_v019_2=CL:0005020,1.27e-11,6;CL:0002138,1.27e-11,6;CL:0005022,1.27e-11,6;CL:0000115,4.61e-10,36;CL:1000746,1.23e-09,7;CL:1000612,1.23e-09,7;CL:0002615,1.84e-09,3;CL:0002188,8.78e-09,5;CL:0000136,2.29e-08,15;CL:0002139,6.41e-08,24;CL:0002078,1.78e-07,45;CL:0000669,2.86e-07,4;CL:0002617,6.41e-07,2;CL:0002575,6.79e-07,2|ontology_enrichment_development_v019=CL:0005022;2.99e-11;6!UBERON:0005062;2.52e-07;4!UBERON:0007284;2.52e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;4.10e-07;2|ontology_enrichment_disease_v019_2=DOID:114,3.46e-07,2|ontology_enrichment_uberon=UBERON:0002049!1.76e-12!79;UBERON:0007798!1.76e-12!79;UBERON:0001009!3.14e-12!113;UBERON:0004535!1.26e-10!110;UBERON:0000055!2.75e-10!69;UBERON:0002465!2.79e-08!10;UBERON:0001473!7.37e-08!8;UBERON:0004536!7.37e-08!8;UBERON:0006558!7.37e-08!8;UBERON:0004872!1.16e-07!84|ontology_enrichment_uberon_v019=UBERON:0001473;9.99e-12;8!UBERON:0004536;9.99e-12;8!UBERON:0006558;9.99e-12;8!UBERON:0000074;7.76e-10;7!UBERON:0001229;7.76e-10;7!UBERON:0002465;3.06e-09;10!UBERON:0007100;2.88e-08;25!UBERON:0003688;7.02e-08;6!UBERON:0002358;7.02e-08;6!UBERON:0003684;7.02e-08;6!UBERON:0001178;7.02e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0001009,1.40e-12,112;UBERON:0001473,4.18e-12,8;UBERON:0004536,4.18e-12,8;UBERON:0006558,4.18e-12,8;UBERON:0002049,1.99e-10,78;UBERON:0007798,1.99e-10,78;UBERON:0004535,1.06e-09,109;UBERON:0010532,1.23e-09,7;UBERON:0000074,1.23e-09,7;UBERON:0001229,1.23e-09,7;UBERON:0001230,1.23e-09,7;UBERON:0003220,1.23e-09,7;UBERON:0005749,1.23e-09,7;UBERON:0004199,1.23e-09,7;UBERON:0004209,1.23e-09,7;UBERON:0004198,1.23e-09,7;UBERON:0002465,1.55e-09,10;UBERON:0000055,6.56e-09,68;UBERON:0005103,2.18e-08,8;UBERON:0000083,2.18e-08,8;UBERON:0009201,2.18e-08,8;UBERON:0006553,2.18e-08,8;UBERON:0003074,2.18e-08,8;UBERON:0003060,2.18e-08,8;UBERON:0003688,5.10e-08,6;UBERON:0002358,5.10e-08,6;UBERON:0003684,5.10e-08,6;UBERON:0001178,5.10e-08,6;UBERON:0007100,1.49e-07,27;UBERON:0000080,2.05e-07,9;UBERON:0002120,2.05e-07,9;UBERON:0004875,2.05e-07,9;UBERON:0005721,2.05e-07,9;UBERON:0005754,2.05e-07,9;UBERON:0007297,2.05e-07,9|phase1_expression=1.45342703416445,5.35251309727458,1.26858963686374,3.00219895059391,3.5756887554183,0.872338524100369,0,0.631719873426831,1.04474251279935,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,1.20538905604795,0,0,0,0,0,0,0.273748850145768,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,1.25849830862972,0,0.208994966536811,1.29208379584664,1.42306505074684,1.67360306382335,0.805658634218294,1.52054421143703,2.4406205754817,0,4.0507097394088,0.0892997282840798,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0,6.46063537203914,0.506522046658319,0,0.286836620748814,0,0,0,3.7000132262574,0.622422070799533,0.942974704487816,0.817309515567294,1.81628913173918,1.15235184896,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0.741800787835671,0.910161361938026,1.43723628363248,0,0,0,0,0.30648779579902,0.150238058906597,0.340296549480063,0,0.213557388818567,0.847727604638247,0.300091096084402,0.103052529238439,0.257640540045629,0.558350568994769,0.337552664482532,0.389748020644795,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0.821860859650752,2.45422961193825,1.85194205030644,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.448524337381443,1.74384027533312,0.07333828582095,0.904902010304444,0,1.690605505112,1.06375246633948,1.04007436911366,0,0,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0.710783897485092,0,0.602878754119172,0,0.899756920638513,0,0,0,0.958499421966331,0,0,0.434343920002738,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,1.03985430765404,0.535286966391485,0.157702415033935,0.2342828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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:110895063..110895095,- | |||
|id=chr13:110895063..110895095,- | |||
|ontology_enrichment_celltype=CL:0000222!1.17e-08!119;CL:0000136!1.40e-07!15;CL:0002139!5.77e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.99e-11;6!CL:0000136;7.27e-10;13!CL:1000746;7.76e-10;7!CL:1000612;7.76e-10;7!CL:0002615;1.55e-09;3!CL:0002188;5.15e-09;5!CL:0000115;7.88e-09;36!CL:0002139;9.27e-08;24!CL:0000669;2.44e-07;4!CL:0002575;5.34e-07;2!CL:0002617;7.67e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.27e-11,6;CL:0002138,1.27e-11,6;CL:0005022,1.27e-11,6;CL:0000115,4.61e-10,36;CL:1000746,1.23e-09,7;CL:1000612,1.23e-09,7;CL:0002615,1.84e-09,3;CL:0002188,8.78e-09,5;CL:0000136,2.29e-08,15;CL:0002139,6.41e-08,24;CL:0002078,1.78e-07,45;CL:0000669,2.86e-07,4;CL:0002617,6.41e-07,2;CL:0002575,6.79e-07,2 | |||
|ontology_enrichment_development_v019=CL:0005022;2.99e-11;6!UBERON:0005062;2.52e-07;4!UBERON:0007284;2.52e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.10e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.46e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.76e-12!79;UBERON:0007798!1.76e-12!79;UBERON:0001009!3.14e-12!113;UBERON:0004535!1.26e-10!110;UBERON:0000055!2.75e-10!69;UBERON:0002465!2.79e-08!10;UBERON:0001473!7.37e-08!8;UBERON:0004536!7.37e-08!8;UBERON:0006558!7.37e-08!8;UBERON:0004872!1.16e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;9.99e-12;8!UBERON:0004536;9.99e-12;8!UBERON:0006558;9.99e-12;8!UBERON:0000074;7.76e-10;7!UBERON:0001229;7.76e-10;7!UBERON:0002465;3.06e-09;10!UBERON:0007100;2.88e-08;25!UBERON:0003688;7.02e-08;6!UBERON:0002358;7.02e-08;6!UBERON:0003684;7.02e-08;6!UBERON:0001178;7.02e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,1.40e-12,112;UBERON:0001473,4.18e-12,8;UBERON:0004536,4.18e-12,8;UBERON:0006558,4.18e-12,8;UBERON:0002049,1.99e-10,78;UBERON:0007798,1.99e-10,78;UBERON:0004535,1.06e-09,109;UBERON:0010532,1.23e-09,7;UBERON:0000074,1.23e-09,7;UBERON:0001229,1.23e-09,7;UBERON:0001230,1.23e-09,7;UBERON:0003220,1.23e-09,7;UBERON:0005749,1.23e-09,7;UBERON:0004199,1.23e-09,7;UBERON:0004209,1.23e-09,7;UBERON:0004198,1.23e-09,7;UBERON:0002465,1.55e-09,10;UBERON:0000055,6.56e-09,68;UBERON:0005103,2.18e-08,8;UBERON:0000083,2.18e-08,8;UBERON:0009201,2.18e-08,8;UBERON:0006553,2.18e-08,8;UBERON:0003074,2.18e-08,8;UBERON:0003060,2.18e-08,8;UBERON:0003688,5.10e-08,6;UBERON:0002358,5.10e-08,6;UBERON:0003684,5.10e-08,6;UBERON:0001178,5.10e-08,6;UBERON:0007100,1.49e-07,27;UBERON:0000080,2.05e-07,9;UBERON:0002120,2.05e-07,9;UBERON:0004875,2.05e-07,9;UBERON:0005721,2.05e-07,9;UBERON:0005754,2.05e-07,9;UBERON:0007297,2.05e-07,9 | |||
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| |||
|short_description=p@chr13:110895063..110895095,- | |||
}} |
Revision as of 01:28, 11 September 2013
Short description: | p@chr13:110895063..110895095, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:110895063..110895095, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.27e-11 | 6 |
endothelial cell of lymphatic vessel | 1.27e-11 | 6 |
vascular lymphangioblast | 1.27e-11 | 6 |
endothelial cell | 4.61e-10 | 36 |
glomerular cell | 1.23e-09 | 7 |
kidney corpuscule cell | 1.23e-09 | 7 |
adipocyte of omentum tissue | 1.84e-09 | 3 |
glomerular endothelial cell | 8.78e-09 | 5 |
fat cell | 2.29e-08 | 15 |
endothelial cell of vascular tree | 6.41e-08 | 24 |
meso-epithelial cell | 1.78e-07 | 45 |
pericyte cell | 2.86e-07 | 4 |
adipocyte of breast | 6.41e-07 | 2 |
central nervous system pericyte | 6.79e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 1.40e-12 | 112 |
lymphatic vessel | 4.18e-12 | 8 |
lymph vasculature | 4.18e-12 | 8 |
lymphatic part of lymphoid system | 4.18e-12 | 8 |
vasculature | 1.99e-10 | 78 |
vascular system | 1.99e-10 | 78 |
cardiovascular system | 1.06e-09 | 109 |
primitive nephron | 1.23e-09 | 7 |
renal glomerulus | 1.23e-09 | 7 |
renal corpuscle | 1.23e-09 | 7 |
glomerular capsule | 1.23e-09 | 7 |
metanephric mesenchyme | 1.23e-09 | 7 |
glomerular tuft | 1.23e-09 | 7 |
S-shaped body | 1.23e-09 | 7 |
renal vesicle | 1.23e-09 | 7 |
comma-shaped body | 1.23e-09 | 7 |
lymphoid system | 1.55e-09 | 10 |
vessel | 6.56e-09 | 68 |
mesonephric epithelium | 2.18e-08 | 8 |
mesonephric tubule | 2.18e-08 | 8 |
nephric duct | 2.18e-08 | 8 |
renal duct | 2.18e-08 | 8 |
mesonephric duct | 2.18e-08 | 8 |
pronephric duct | 2.18e-08 | 8 |
omentum | 5.10e-08 | 6 |
peritoneum | 5.10e-08 | 6 |
abdominal cavity | 5.10e-08 | 6 |
visceral peritoneum | 5.10e-08 | 6 |
primary circulatory organ | 1.49e-07 | 27 |
mesonephros | 2.05e-07 | 9 |
pronephros | 2.05e-07 | 9 |
nephrogenic cord | 2.05e-07 | 9 |
pronephric mesoderm | 2.05e-07 | 9 |
rostral part of nephrogenic cord | 2.05e-07 | 9 |
presumptive pronephric mesoderm | 2.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.46e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.