FFCP PHASE1:Hg19::chr14:90864738..90864762,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=801|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1442|TSSclassifier=S|UniProt=Q96HY3|association_with_transcript=129bp_to_uc001xym.1_5end|coexpression_cluster_id=C17|description=CAGE_peak_39_at_CALM1_5end|id=chr14:90864738..90864762,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;1.14e-13;2|ontology_enrichment_celltype_v019_2=CL:0000047,1.94e-13,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4556;1.05e-09;3|ontology_enrichment_disease_v019_2=DOID:4556,1.10e-09,3|ontology_enrichment_uberon=UBERON:0001049!3.80e-16!57;UBERON:0005068!3.80e-16!57;UBERON:0006241!3.80e-16!57;UBERON:0007135!3.80e-16!57;UBERON:0000073!8.52e-16!94;UBERON:0001016!8.52e-16!94;UBERON:0001017!6.34e-15!82;UBERON:0002780!7.39e-15!41;UBERON:0001890!7.39e-15!41;UBERON:0006240!7.39e-15!41;UBERON:0005743!1.74e-14!86;UBERON:0001893!2.31e-14!34;UBERON:0003080!2.62e-14!42;UBERON:0003075!1.77e-13!86;UBERON:0007284!1.77e-13!86;UBERON:0002791!2.55e-13!33;UBERON:0002346!2.56e-13!90;UBERON:0000955!5.12e-13!69;UBERON:0006238!5.12e-13!69;UBERON:0002616!5.37e-13!59;UBERON:0002020!1.07e-12!34;UBERON:0003528!1.07e-12!34;UBERON:0001869!2.01e-12!32;UBERON:0003056!9.32e-11!61;UBERON:0007023!4.26e-10!115;UBERON:0000924!2.52e-09!173;UBERON:0006601!2.52e-09!173;UBERON:0001950!2.79e-09!20;UBERON:0004121!2.86e-09!169;UBERON:0002420!1.17e-08!9;UBERON:0007245!1.17e-08!9;UBERON:0010009!1.17e-08!9;UBERON:0010011!1.17e-08!9;UBERON:0000454!1.17e-08!9;UBERON:0000153!1.76e-08!129;UBERON:0007811!1.76e-08!129;UBERON:0002619!4.04e-08!22;UBERON:0000033!6.43e-08!123;UBERON:0000956!7.01e-08!25;UBERON:0000203!7.01e-08!25;UBERON:0002308!8.61e-07!9;UBERON:0000125!8.61e-07!9|ontology_enrichment_uberon_v019=UBERON:0007190;6.72e-26;1!UBERON:0000988;1.47e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0007190,9.79e-26,1;UBERON:0000988,1.41e-09,3;UBERON:0001017,1.11e-07,81;UBERON:0001016,6.05e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0.283604451492204,0,0,0.196468613246569,0.364295288292542,0,0.324547393654683,0.870648686496336,0.132957960518865,0,0,0,0.596287222100115,0,0,0,0,0.550236083880135,0.208994966536811,0,0,1.00416183829401,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0.468008530278475,0,0,0,0.141775097242386,0.0895585227028483,0.581267877027924,0,10.8385912337108,0.176096868026452,0.414656231081544,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0,0,0,1.27047312111232,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.801288320820636,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.927680981618513,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0.361789315876224,0,0.221158519862449,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.606610196826093,0,0.702793337176017,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0.34945333648406,0,0,0,0,0.0969890164884194,0.882561266915003,0,0,0,0.379864775735272,0.195551382734803,0.0801588202515337,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0.135904206073614,0,0.203996435272644,0,0.600420288709789,0.410716136675979,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.254019996197353,0,0,0,0,0.415440338029185,0,0.77380195455795,0.607495566580247,0.335434687599266,0,0.0524545881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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1442 | |||
|TSSclassifier=S | |||
|UniProt=Q96HY3 | |||
|association_with_transcript=129bp_to_uc001xym.1_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_39_at_CALM1_5end | |||
|id=chr14:90864738..90864762,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.14e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.94e-13,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;1.05e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.10e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.80e-16!57;UBERON:0005068!3.80e-16!57;UBERON:0006241!3.80e-16!57;UBERON:0007135!3.80e-16!57;UBERON:0000073!8.52e-16!94;UBERON:0001016!8.52e-16!94;UBERON:0001017!6.34e-15!82;UBERON:0002780!7.39e-15!41;UBERON:0001890!7.39e-15!41;UBERON:0006240!7.39e-15!41;UBERON:0005743!1.74e-14!86;UBERON:0001893!2.31e-14!34;UBERON:0003080!2.62e-14!42;UBERON:0003075!1.77e-13!86;UBERON:0007284!1.77e-13!86;UBERON:0002791!2.55e-13!33;UBERON:0002346!2.56e-13!90;UBERON:0000955!5.12e-13!69;UBERON:0006238!5.12e-13!69;UBERON:0002616!5.37e-13!59;UBERON:0002020!1.07e-12!34;UBERON:0003528!1.07e-12!34;UBERON:0001869!2.01e-12!32;UBERON:0003056!9.32e-11!61;UBERON:0007023!4.26e-10!115;UBERON:0000924!2.52e-09!173;UBERON:0006601!2.52e-09!173;UBERON:0001950!2.79e-09!20;UBERON:0004121!2.86e-09!169;UBERON:0002420!1.17e-08!9;UBERON:0007245!1.17e-08!9;UBERON:0010009!1.17e-08!9;UBERON:0010011!1.17e-08!9;UBERON:0000454!1.17e-08!9;UBERON:0000153!1.76e-08!129;UBERON:0007811!1.76e-08!129;UBERON:0002619!4.04e-08!22;UBERON:0000033!6.43e-08!123;UBERON:0000956!7.01e-08!25;UBERON:0000203!7.01e-08!25;UBERON:0002308!8.61e-07!9;UBERON:0000125!8.61e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007190;6.72e-26;1!UBERON:0000988;1.47e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007190,9.79e-26,1;UBERON:0000988,1.41e-09,3;UBERON:0001017,1.11e-07,81;UBERON:0001016,6.05e-07,89 | |||
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|short_description=p39@CALM1 | |||
}} |
Revision as of 05:54, 11 September 2013
Short description: | p39@CALM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_39_at_CALM1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 129bp_to_uc001xym.1_5end |
EntrezGene: | CALM1 |
HGNC: | 1442 |
UniProt: | Q96HY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.94e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
paracentral gyrus | 9.79e-26 | 1 |
pons | 1.41e-09 | 3 |
central nervous system | 1.11e-07 | 81 |
nervous system | 6.05e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.10e-09 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.