FFCP PHASE1:Hg19::chr17:17480803..17480814,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10400|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8830|TSSclassifier=S|UniProt=Q9UBM1|association_with_transcript=-24bp_to_ENST00000395782,NM_148173,uc002grj.2_5end|coexpression_cluster_id=C39|description=CAGE_peak_19_at_PEMT_5end|id=chr17:17480803..17480814,-|ontology_enrichment_celltype=CL:0002541!3.09e-24!3;CL:1000449!8.98e-17!16;CL:1000507!6.32e-16!12;CL:1000494!6.32e-16!12;CL:1000497!7.34e-15!18;CL:0002518!7.34e-15!18;CL:0002681!9.94e-15!13;CL:0002584!9.94e-15!13;CL:0000650!1.03e-11!3;CL:1000618!1.03e-11!3;CL:1001318!1.03e-11!3;CL:0002173!1.03e-11!3;CL:1000500!1.03e-11!3;CL:0000239!4.90e-11!3;CL:1000615!4.90e-11!3;CL:0002306!4.90e-11!3;CL:1000612!1.14e-10!7;CL:1000746!1.14e-10!7;CL:0000669!2.31e-07!5|ontology_enrichment_celltype_v019=CL:0000650;3.53e-50;2!CL:1000500;3.53e-50;2!CL:1000618;3.53e-50;2!CL:1001318;3.53e-50;2!CL:0002173;3.53e-50;2!CL:0000669;1.05e-25;4!CL:1000746;3.66e-15;7!CL:1000612;3.66e-15;7!CL:1000507;6.44e-11;10!CL:1000494;6.44e-11;10!CL:0002541;1.60e-09;3!CL:0002681;2.95e-09;12!CL:0002584;2.95e-09;12!CL:1000449;1.37e-07;15!CL:1000497;8.47e-07;17!CL:0002518;8.47e-07;17|ontology_enrichment_celltype_v019_2=CL:0000650,3.11e-50,2;CL:1000500,3.11e-50,2;CL:1000618,3.11e-50,2;CL:1001318,3.11e-50,2;CL:0002173,3.11e-50,2;CL:0000669,9.82e-26,4;CL:1000746,3.53e-15,7;CL:1000612,3.53e-15,7;CL:1000507,6.28e-11,10;CL:1000494,6.28e-11,10;CL:0002541,1.41e-09,3;CL:0002681,2.89e-09,12;CL:0002584,2.89e-09,12;CL:1000449,1.35e-07,15;CL:1000497,8.34e-07,17;CL:0002518,8.34e-07,17|ontology_enrichment_development_v019=UBERON:0003124;8.64e-26;1!UBERON:0007297;6.43e-14;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000476!3.09e-24!3;UBERON:0000920!3.09e-24!3;UBERON:0006555!1.79e-21!17;UBERON:0005103!1.79e-21!17;UBERON:0000083!1.79e-21!17;UBERON:0009201!1.79e-21!17;UBERON:0004819!1.79e-21!17;UBERON:0006553!1.79e-21!17;UBERON:0003074!1.79e-21!17;UBERON:0003060!1.79e-21!17;UBERON:0000080!3.06e-20!18;UBERON:0002120!3.06e-20!18;UBERON:0004875!3.06e-20!18;UBERON:0005721!3.06e-20!18;UBERON:0005754!3.06e-20!18;UBERON:0007297!3.06e-20!18;UBERON:0003124!2.82e-18!7;UBERON:0004876!3.83e-18!20;UBERON:0003887!3.04e-17!21;UBERON:0002113!4.04e-17!27;UBERON:0003918!4.04e-17!27;UBERON:0005095!4.04e-17!27;UBERON:0007687!4.04e-17!27;UBERON:0004211!8.98e-17!16;UBERON:0001285!8.98e-17!16;UBERON:0007684!8.98e-17!16;UBERON:0003220!8.98e-17!16;UBERON:0004208!8.98e-17!16;UBERON:0009773!6.32e-16!12;UBERON:0001231!6.32e-16!12;UBERON:0004810!6.32e-16!12;UBERON:0001225!9.94e-15!13;UBERON:0008987!9.94e-15!13;UBERON:0000489!2.79e-14!32;UBERON:0000058!8.81e-14!26;UBERON:0002417!1.93e-13!61;UBERON:0000916!1.93e-13!61;UBERON:0003886!7.52e-13!63;UBERON:0005172!2.01e-12!55;UBERON:0005173!2.01e-12!55;UBERON:0001851!6.12e-12!16;UBERON:0003567!1.03e-11!3;UBERON:0003838!1.03e-11!3;UBERON:0005169!1.03e-11!3;UBERON:0002321!1.03e-11!3;UBERON:0005215!1.03e-11!3;UBERON:0002303!1.03e-11!3;UBERON:0002319!1.03e-11!3;UBERON:0002553!2.22e-11!70;UBERON:0000353!3.15e-11!17;UBERON:0006853!4.90e-11!3;UBERON:0007685!4.90e-11!3;UBERON:0004134!4.90e-11!3;UBERON:0000074!1.14e-10!7;UBERON:0001229!1.14e-10!7;UBERON:0001230!1.14e-10!7;UBERON:0005749!1.14e-10!7;UBERON:0004199!1.14e-10!7;UBERON:0004209!1.14e-10!7;UBERON:0004198!1.14e-10!7;UBERON:0006554!4.27e-10!44;UBERON:0001008!7.55e-10!45;UBERON:0001301!1.60e-09!1;UBERON:0003064!1.89e-09!37;UBERON:0005631!3.19e-09!14;UBERON:0000158!3.19e-09!14;UBERON:0000466!5.37e-08!126;UBERON:0009569!9.84e-08!113;UBERON:0003891!2.31e-07!5;UBERON:0003586!2.31e-07!5;UBERON:0000464!4.65e-07!104;UBERON:0003135!6.65e-07!11|ontology_enrichment_uberon_v019=UBERON:0003567;3.53e-50;2!UBERON:0003838;3.53e-50;2!UBERON:0003586;3.53e-50;2!UBERON:0005169;3.53e-50;2!UBERON:0002321;3.53e-50;2!UBERON:0005215;3.53e-50;2!UBERON:0002303;3.53e-50;2!UBERON:0002319;3.53e-50;2!UBERON:0001301;2.16e-26;1!UBERON:0003891;1.05e-25;4!UBERON:0000074;3.66e-15;7!UBERON:0001229;3.66e-15;7!UBERON:0004211;6.44e-11;10!UBERON:0009773;6.44e-11;10!UBERON:0001231;6.44e-11;10!UBERON:0004810;6.44e-11;10!UBERON:0006947;1.01e-09;3!UBERON:0004054;1.01e-09;3!UBERON:0003124;1.60e-09;3!UBERON:0000920;1.60e-09;3!UBERON:0001225;2.95e-09;12!UBERON:0008987;2.95e-09;12!UBERON:0005904;1.31e-07;4!UBERON:0001851;1.37e-07;15!UBERON:0006555;1.37e-07;15!UBERON:0000353;1.37e-07;15!UBERON:0004819;1.37e-07;15!UBERON:0001285;1.37e-07;15!UBERON:0007684;1.37e-07;15!UBERON:0001987;1.86e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0003567,3.11e-50,2;UBERON:0003838,3.11e-50,2;UBERON:0003586,3.11e-50,2;UBERON:0005169,3.11e-50,2;UBERON:0002321,3.11e-50,2;UBERON:0005215,3.11e-50,2;UBERON:0002303,3.11e-50,2;UBERON:0002319,3.11e-50,2;UBERON:0005103,1.23e-28,8;UBERON:0000083,1.23e-28,8;UBERON:0009201,1.23e-28,8;UBERON:0006553,1.23e-28,8;UBERON:0003074,1.23e-28,8;UBERON:0003060,1.23e-28,8;UBERON:0001301,2.16e-26,1;UBERON:0003891,9.82e-26,4;UBERON:000008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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10400 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8830 | |||
|TSSclassifier=S | |||
|UniProt=Q9UBM1 | |||
|association_with_transcript=-24bp_to_ENST00000395782,NM_148173,uc002grj.2_5end | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_19_at_PEMT_5end | |||
|id=chr17:17480803..17480814,- | |||
|ontology_enrichment_celltype=CL:0002541!3.09e-24!3;CL:1000449!8.98e-17!16;CL:1000507!6.32e-16!12;CL:1000494!6.32e-16!12;CL:1000497!7.34e-15!18;CL:0002518!7.34e-15!18;CL:0002681!9.94e-15!13;CL:0002584!9.94e-15!13;CL:0000650!1.03e-11!3;CL:1000618!1.03e-11!3;CL:1001318!1.03e-11!3;CL:0002173!1.03e-11!3;CL:1000500!1.03e-11!3;CL:0000239!4.90e-11!3;CL:1000615!4.90e-11!3;CL:0002306!4.90e-11!3;CL:1000612!1.14e-10!7;CL:1000746!1.14e-10!7;CL:0000669!2.31e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000650;3.53e-50;2!CL:1000500;3.53e-50;2!CL:1000618;3.53e-50;2!CL:1001318;3.53e-50;2!CL:0002173;3.53e-50;2!CL:0000669;1.05e-25;4!CL:1000746;3.66e-15;7!CL:1000612;3.66e-15;7!CL:1000507;6.44e-11;10!CL:1000494;6.44e-11;10!CL:0002541;1.60e-09;3!CL:0002681;2.95e-09;12!CL:0002584;2.95e-09;12!CL:1000449;1.37e-07;15!CL:1000497;8.47e-07;17!CL:0002518;8.47e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,3.11e-50,2;CL:1000500,3.11e-50,2;CL:1000618,3.11e-50,2;CL:1001318,3.11e-50,2;CL:0002173,3.11e-50,2;CL:0000669,9.82e-26,4;CL:1000746,3.53e-15,7;CL:1000612,3.53e-15,7;CL:1000507,6.28e-11,10;CL:1000494,6.28e-11,10;CL:0002541,1.41e-09,3;CL:0002681,2.89e-09,12;CL:0002584,2.89e-09,12;CL:1000449,1.35e-07,15;CL:1000497,8.34e-07,17;CL:0002518,8.34e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.64e-26;1!UBERON:0007297;6.43e-14;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p19@PEMT | |||
}} |
Revision as of 12:27, 11 September 2013
Short description: | p19@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_PEMT_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -24bp_to_ENST00000395782, NM_148173, uc002grj.2_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | Q9UBM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 3.11e-50 | 2 |
kidney interstitial cell | 3.11e-50 | 2 |
juxtaglomerular complex cell | 3.11e-50 | 2 |
renal interstitial pericyte | 3.11e-50 | 2 |
extraglomerular mesangial cell | 3.11e-50 | 2 |
pericyte cell | 9.82e-26 | 4 |
glomerular cell | 3.53e-15 | 7 |
kidney corpuscule cell | 3.53e-15 | 7 |
kidney tubule cell | 6.28e-11 | 10 |
nephron tubule epithelial cell | 6.28e-11 | 10 |
chorionic membrane mesenchymal stem cell | 1.41e-09 | 3 |
kidney cortical cell | 2.89e-09 | 12 |
renal cortical epithelial cell | 2.89e-09 | 12 |
epithelial cell of nephron | 1.35e-07 | 15 |
kidney cell | 8.34e-07 | 17 |
kidney epithelial cell | 8.34e-07 | 17 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.