FFCP PHASE1:Hg19::chr17:73636184..73636203,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=643008|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=40030|TSSclassifier=S|UniProt=Q71RC9|association_with_transcript=-5bp_to_AF370408_5end|coexpression_cluster_id=C68|description=CAGE_peak_2_at_C17orf109_5end|id=chr17:73636184..73636203,+|ontology_enrichment_celltype=CL:0002368!8.19e-09!13;CL:0000066!2.65e-08!254;CL:0002076!5.49e-08!43;CL:0002202!6.38e-08!9;CL:0002632!6.38e-08!9;CL:0000349!1.49e-07!3;CL:0002577!1.49e-07!3;CL:0002541!2.31e-07!3;CL:0002328!9.24e-07!3|ontology_enrichment_celltype_v019=CL:0000349;4.13e-20;19!CL:0002536;1.72e-10;2!CL:0002537;3.24e-10;5!CL:0002541;6.12e-08;3!CL:0002577;1.84e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,4.34e-20,19;CL:0002536,1.99e-10,2;CL:0002537,3.25e-10,5;CL:0002541,6.45e-08,3;CL:0002577,1.69e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:299!2.13e-11!25;DOID:5093!5.57e-09!4;DOID:1612!5.57e-09!4|ontology_enrichment_disease_v019=DOID:5093;1.40e-11;4!DOID:1612;1.40e-11;4|ontology_enrichment_disease_v019_2=DOID:5093,1.98e-11,4;DOID:1612,1.98e-11,4|ontology_enrichment_uberon=UBERON:0005631!8.08e-22!14;UBERON:0000158!8.08e-22!14;UBERON:0003124!1.85e-15!7;UBERON:0000478!2.23e-11!24;UBERON:0004119!4.38e-11!169;UBERON:0000925!4.38e-11!169;UBERON:0006595!4.38e-11!169;UBERON:0001987!8.94e-10!4;UBERON:0004340!8.94e-10!4;UBERON:0000077!1.93e-09!130;UBERON:0000305!1.40e-08!7;UBERON:0004871!1.96e-07!8;UBERON:0000464!2.02e-07!104;UBERON:0000476!2.31e-07!3;UBERON:0000920!2.31e-07!3;UBERON:0001004!3.67e-07!72;UBERON:0001007!6.36e-07!155;UBERON:0001555!6.36e-07!155;UBERON:0007026!6.36e-07!155;UBERON:0004815!9.24e-07!3;UBERON:0002031!9.24e-07!3;UBERON:0004175!9.43e-07!25|ontology_enrichment_uberon_v019=UBERON:0005631;2.41e-24;10!UBERON:0000158;2.41e-24;10!UBERON:0000478;2.23e-19;24!UBERON:0000305;4.18e-18;7!UBERON:0001987;6.23e-12;4!UBERON:0000341;8.85e-11;2!UBERON:0003124;6.12e-08;3!UBERON:0000920;6.12e-08;3!UBERON:0001723;7.50e-08;3!UBERON:0001033;7.50e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.48e-34,14;UBERON:0000158,1.48e-34,14;UBERON:0000478,2.33e-19,24;UBERON:0003124,3.77e-18,7;UBERON:0000305,4.66e-18,7;UBERON:0004871,9.01e-16,8;UBERON:0001987,5.69e-12,4;UBERON:0004340,5.69e-12,4;UBERON:0000341,6.42e-11,2;UBERON:0000920,6.45e-08,3;UBERON:0001723,7.39e-08,3;UBERON:0001033,7.39e-08,3;UBERON:0010056,7.39e-08,3;UBERON:0004923,3.52e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,1.31064823278103,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0.728590576585084,0.741568885568859,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.109750285408626,1.1240175325762,0,0,0,0,0,0,0,0,0,0,1.58040879591855,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,1.66435439510497,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828728900423067,0,0,0,1.80479845162965,0.462092022626489,0,0,0.211103257785751,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,1.44257416306811,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,1.88287601553558,0,1.68471475667626,3.54744122829341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,34.1404613174897,10.690728509975,28.8731059973278,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.690503839458535,0,0,0,0,0,1.04171104434093,0.0874599999961957,0,0,2.03402920234213,0.472775363535873,0,0,0,0,0,0,0,0,0,0,7.52888219104458,0.923403102045565,0,0,0,0,14.0360510282045,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,1.95879369790977,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,4.84945082442097,0,0.677942222341597,0,0,0,0.977756913674015,0,2.77488893161158,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0,1.67717343799633,0.788057072991982,1.15400093896996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.4196385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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=643008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=40030 | |||
|TSSclassifier=S | |||
|UniProt=Q71RC9 | |||
|association_with_transcript=-5bp_to_AF370408_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_2_at_C17orf109_5end | |||
|id=chr17:73636184..73636203,+ | |||
|ontology_enrichment_celltype=CL:0002368!8.19e-09!13;CL:0000066!2.65e-08!254;CL:0002076!5.49e-08!43;CL:0002202!6.38e-08!9;CL:0002632!6.38e-08!9;CL:0000349!1.49e-07!3;CL:0002577!1.49e-07!3;CL:0002541!2.31e-07!3;CL:0002328!9.24e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.13e-20;19!CL:0002536;1.72e-10;2!CL:0002537;3.24e-10;5!CL:0002541;6.12e-08;3!CL:0002577;1.84e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.34e-20,19;CL:0002536,1.99e-10,2;CL:0002537,3.25e-10,5;CL:0002541,6.45e-08,3;CL:0002577,1.69e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!2.13e-11!25;DOID:5093!5.57e-09!4;DOID:1612!5.57e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.40e-11;4!DOID:1612;1.40e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.98e-11,4;DOID:1612,1.98e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!8.08e-22!14;UBERON:0000158!8.08e-22!14;UBERON:0003124!1.85e-15!7;UBERON:0000478!2.23e-11!24;UBERON:0004119!4.38e-11!169;UBERON:0000925!4.38e-11!169;UBERON:0006595!4.38e-11!169;UBERON:0001987!8.94e-10!4;UBERON:0004340!8.94e-10!4;UBERON:0000077!1.93e-09!130;UBERON:0000305!1.40e-08!7;UBERON:0004871!1.96e-07!8;UBERON:0000464!2.02e-07!104;UBERON:0000476!2.31e-07!3;UBERON:0000920!2.31e-07!3;UBERON:0001004!3.67e-07!72;UBERON:0001007!6.36e-07!155;UBERON:0001555!6.36e-07!155;UBERON:0007026!6.36e-07!155;UBERON:0004815!9.24e-07!3;UBERON:0002031!9.24e-07!3;UBERON:0004175!9.43e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.41e-24;10!UBERON:0000158;2.41e-24;10!UBERON:0000478;2.23e-19;24!UBERON:0000305;4.18e-18;7!UBERON:0001987;6.23e-12;4!UBERON:0000341;8.85e-11;2!UBERON:0003124;6.12e-08;3!UBERON:0000920;6.12e-08;3!UBERON:0001723;7.50e-08;3!UBERON:0001033;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.48e-34,14;UBERON:0000158,1.48e-34,14;UBERON:0000478,2.33e-19,24;UBERON:0003124,3.77e-18,7;UBERON:0000305,4.66e-18,7;UBERON:0004871,9.01e-16,8;UBERON:0001987,5.69e-12,4;UBERON:0004340,5.69e-12,4;UBERON:0000341,6.42e-11,2;UBERON:0000920,6.45e-08,3;UBERON:0001723,7.39e-08,3;UBERON:0001033,7.39e-08,3;UBERON:0010056,7.39e-08,3;UBERON:0004923,3.52e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,1.31064823278103,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0.728590576585084,0.741568885568859,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.109750285408626,1.1240175325762,0,0,0,0,0,0,0,0,0,0,1.58040879591855,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,1.66435439510497,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828728900423067,0,0,0,1.80479845162965,0.462092022626489,0,0,0.211103257785751,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,1.44257416306811,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,1.88287601553558,0,1.68471475667626,3.54744122829341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,34.1404613174897,10.690728509975,28.8731059973278,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.690503839458535,0,0,0,0,0,1.04171104434093,0.0874599999961957,0,0,2.03402920234213,0.472775363535873,0,0,0,0,0,0,0,0,0,0,7.52888219104458,0.923403102045565,0,0,0,0,14.0360510282045,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,1.95879369790977,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,4.84945082442097,0,0.677942222341597,0,0,0,0.977756913674015,0,2.77488893161158,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0,1.67717343799633,0.788057072991982,1.15400093896996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3539033808178,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,2.76503864725637,1.29068207646083,0,0,1.27016115057279,0.4582137370881,0,0,5.70462702168741,0,1.46301509978723,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,2.77204176471275,1.66645102024618,0,0.0620747142958579,0,1.46388464039779,0.808468755832877,4.35433495793923,3.76456631193809,4.57993960499195,0.502055437748735,0,0,0,0,0,0,0.122241444182866,1.62758471326295,0,0,0 | |||
|short_description=p2@C17orf109 | |||
}} |
Revision as of 15:40, 11 September 2013
Short description: | p2@C17orf109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_C17orf109_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -5bp_to_AF370408_5end |
EntrezGene: | C17orf109 |
HGNC: | 40030 |
UniProt: | Q71RC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.34e-20 | 19 |
amniotic epithelial cell | 1.99e-10 | 2 |
amnion mesenchymal stem cell | 3.25e-10 | 5 |
chorionic membrane mesenchymal stem cell | 6.45e-08 | 3 |
placental epithelial cell | 1.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.48e-34 | 14 |
membranous layer | 1.48e-34 | 14 |
extraembryonic structure | 2.33e-19 | 24 |
chorion | 3.77e-18 | 7 |
amnion | 4.66e-18 | 7 |
somatic layer of lateral plate mesoderm | 9.01e-16 | 8 |
placenta | 5.69e-12 | 4 |
allantois | 5.69e-12 | 4 |
throat | 6.42e-11 | 2 |
egg chorion | 6.45e-08 | 3 |
tongue | 7.39e-08 | 3 |
gustatory system | 7.39e-08 | 3 |
future tongue | 7.39e-08 | 3 |
organ component layer | 3.52e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.98e-11 | 4 |
breast cancer | 1.98e-11 | 4 |
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