FFCP PHASE1:Hg19::chr19:1026268..1026293,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1265|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2156|TSSclassifier=S|UniProt=Q99439,A6NFI4|association_with_transcript=-4bp_to_ENST00000263097,ENST00000348419,NM_004368,NM_201277,uc002lqt.1,uc002lqu.2,uc002lqv.2,uc010drz.1,uc010xgb.1,uc010xgc.1_5end|description=CAGE_peak_3_at_CNN2_5end|id=chr19:1026268..1026293,+|ontology_enrichment_celltype=CL:0000548!2.80e-17!679;CL:0000004!2.80e-17!679;CL:0000255!2.80e-17!679;CL:0000012!1.29e-16!682;CL:0000003!3.93e-13!722;CL:0000144!6.58e-13!625;CL:0000055!3.74e-10!180;CL:0002371!3.08e-09!591;CL:0002321!7.56e-09!248;CL:0000220!3.04e-08!246;CL:0000063!7.60e-07!578|ontology_enrichment_celltype_v019=CL:0002594;4.81e-08;4!CL:0002615;4.44e-07;3!CL:0000136;7.23e-07;13!CL:0002322;9.56e-07;5|ontology_enrichment_celltype_v019_2=CL:0000136,6.07e-08,15;CL:0002594,1.01e-07,4;CL:0002615,2.08e-07,3;CL:0002322,3.46e-07,5;CL:0002559,7.75e-07,5;CL:0000346,8.67e-07,3;CL:1000428,8.67e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003688;4.54e-12;6!UBERON:0002358;4.54e-12;6!UBERON:0003684;4.54e-12;6!UBERON:0001178;4.54e-12;6!UBERON:0004457;3.02e-10;9!UBERON:0000042;3.02e-10;9!UBERON:0001310;4.81e-08;4!UBERON:0010371;2.80e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.84e-12,6;UBERON:0002358,2.84e-12,6;UBERON:0003684,2.84e-12,6;UBERON:0001178,2.84e-12,6;UBERON:0001310,1.01e-07,4;UBERON:0004457,1.46e-07,12;UBERON:0000042,1.46e-07,12;UBERON:0002073,7.75e-07,5;UBERON:0005086,7.75e-07,5;UBERON:0000412,8.67e-07,3;UBERON:0001992,8.67e-07,3|phase1_expression=2.18014055124668,1.71280419112787,2.96004248601539,3.00219895059391,1.78784437770915,1.74467704820074,2.53299878168311,0,0.261185628199839,0.737201809504527,0.697801167972428,0.218441372130172,0.527533956456907,0.247532705920093,0,0.672325146451775,0,1.46062018077475,1.95173119516203,0.738726348460727,1.63200552995402,1.88072832886853,0.286235987131057,0.410623275218653,0.251085279189606,0.458480434487708,1.23150884174919,0.393553906568396,0,0,0.154816123316076,0,0.6024118375565,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0.22465726229299,0,0,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0,0.384273959177026,0.390178042679635,0.493313713811028,0,0.289803085735052,0.296573126324121,0.267540828089713,0,0.793165398882963,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0.821127996921047,0,0,0.144824403882799,0,0.670700859703636,1.40648818027883,0.361439152384566,1.00267582127178,0.869079113764942,0,0.486634870302636,1.13441780596881,0.221729397462564,1.14185221401064,0.130979075497713,0,0.370784442784429,0,0,0,0.476981248610684,0.571994910780128,0,0.993812036833525,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0,0,0,0,0.402829317109147,0,0.732186172644509,0.367663080345869,0,0,0,0,3.06633274931766,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.759783069987479,0.794455084879313,0.286836620748814,0.709336764396714,2.24271040056923,2.1349799145941,3.45334567784024,0.622422070799533,0.134710672069688,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0.61246251376468,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0,0,0,1.83892677479412,0.901428353439581,1.02088964844019,0,0.213557388818567,0.847727604638247,0.300091096084402,0.515262646192195,0,0.930584281657949,1.0126579934476,0.68205903612839,0,1.28869858099219,0.161646056818812,1.06502877754984,0.503760491138201,0.508681776931463,1.35282597214308,0,0.860413786167011,1.82960559194393,1.98794652482228,2.09149097165133,0.932949495138334,2.27088765788066,1.45990943630332,1.56449532329816,3.85944562915731,1.38134921352481,1.85747171212792,0,1.41968160047813,0.842923450390509,0.723033089650446,0.661763836394364,1.08939722046203,0.71181185733329,1.07865046528132,0.392442930250692,0,0,0,1.6462960453256,0,0,0,0,0.441463099414651,0.368965315629341,1.54411029268673,0.548751427043128,0,0.201057944823262,0,0.651616610620649,0,0,0.463721619900307,1.99594780200897,0,0,0.190254152234598,0,0,0,0.234004265139238,0,1.87467667973554,1.34385702559088,0.850650583454319,0.179117045405697,0,3.06706143332169,0,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0,1.06375246633948,0,0.514414748524284,0,0.266422179016099,0.714889968290738,0,0,0.325736184293735,0.355391948742546,0,0.904318131178758,2.61460037580088,1.99945982364114,0,0,0,0.958499421966331,0,0,0.434343920002738,0.61642896765115,0.358121926479791,0,0.197030760201927,0.215627574859517,0,0.508189248444927,0,0,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1265 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2156 | |||
|TSSclassifier=S | |||
|UniProt=Q99439,A6NFI4 | |||
|association_with_transcript=-4bp_to_ENST00000263097,ENST00000348419,NM_004368,NM_201277,uc002lqt.1,uc002lqu.2,uc002lqv.2,uc010drz.1,uc010xgb.1,uc010xgc.1_5end | |||
|description=CAGE_peak_3_at_CNN2_5end | |||
|id=chr19:1026268..1026293,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.80e-17!679;CL:0000004!2.80e-17!679;CL:0000255!2.80e-17!679;CL:0000012!1.29e-16!682;CL:0000003!3.93e-13!722;CL:0000144!6.58e-13!625;CL:0000055!3.74e-10!180;CL:0002371!3.08e-09!591;CL:0002321!7.56e-09!248;CL:0000220!3.04e-08!246;CL:0000063!7.60e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002594;4.81e-08;4!CL:0002615;4.44e-07;3!CL:0000136;7.23e-07;13!CL:0002322;9.56e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.07e-08,15;CL:0002594,1.01e-07,4;CL:0002615,2.08e-07,3;CL:0002322,3.46e-07,5;CL:0002559,7.75e-07,5;CL:0000346,8.67e-07,3;CL:1000428,8.67e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.54e-12;6!UBERON:0002358;4.54e-12;6!UBERON:0003684;4.54e-12;6!UBERON:0001178;4.54e-12;6!UBERON:0004457;3.02e-10;9!UBERON:0000042;3.02e-10;9!UBERON:0001310;4.81e-08;4!UBERON:0010371;2.80e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.84e-12,6;UBERON:0002358,2.84e-12,6;UBERON:0003684,2.84e-12,6;UBERON:0001178,2.84e-12,6;UBERON:0001310,1.01e-07,4;UBERON:0004457,1.46e-07,12;UBERON:0000042,1.46e-07,12;UBERON:0002073,7.75e-07,5;UBERON:0005086,7.75e-07,5;UBERON:0000412,8.67e-07,3;UBERON:0001992,8.67e-07,3 | |||
|phase1_expression=2.18014055124668,1.71280419112787,2.96004248601539,3.00219895059391,1.78784437770915,1.74467704820074,2.53299878168311,0,0.261185628199839,0.737201809504527,0.697801167972428,0.218441372130172,0.527533956456907,0.247532705920093,0,0.672325146451775,0,1.46062018077475,1.95173119516203,0.738726348460727,1.63200552995402,1.88072832886853,0.286235987131057,0.410623275218653,0.251085279189606,0.458480434487708,1.23150884174919,0.393553906568396,0,0,0.154816123316076,0,0.6024118375565,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0.22465726229299,0,0,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0,0.384273959177026,0.390178042679635,0.493313713811028,0,0.289803085735052,0.296573126324121,0.267540828089713,0,0.793165398882963,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0.821127996921047,0,0,0.144824403882799,0,0.670700859703636,1.40648818027883,0.361439152384566,1.00267582127178,0.869079113764942,0,0.486634870302636,1.13441780596881,0.221729397462564,1.14185221401064,0.130979075497713,0,0.370784442784429,0,0,0,0.476981248610684,0.571994910780128,0,0.993812036833525,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0,0,0,0,0.402829317109147,0,0.732186172644509,0.367663080345869,0,0,0,0,3.06633274931766,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.759783069987479,0.794455084879313,0.286836620748814,0.709336764396714,2.24271040056923,2.1349799145941,3.45334567784024,0.622422070799533,0.134710672069688,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0.61246251376468,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0,0,0,1.83892677479412,0.901428353439581,1.02088964844019,0,0.213557388818567,0.847727604638247,0.300091096084402,0.515262646192195,0,0.930584281657949,1.0126579934476,0.68205903612839,0,1.28869858099219,0.161646056818812,1.06502877754984,0.503760491138201,0.508681776931463,1.35282597214308,0,0.860413786167011,1.82960559194393,1.98794652482228,2.09149097165133,0.932949495138334,2.27088765788066,1.45990943630332,1.56449532329816,3.85944562915731,1.38134921352481,1.85747171212792,0,1.41968160047813,0.842923450390509,0.723033089650446,0.661763836394364,1.08939722046203,0.71181185733329,1.07865046528132,0.392442930250692,0,0,0,1.6462960453256,0,0,0,0,0.441463099414651,0.368965315629341,1.54411029268673,0.548751427043128,0,0.201057944823262,0,0.651616610620649,0,0,0.463721619900307,1.99594780200897,0,0,0.190254152234598,0,0,0,0.234004265139238,0,1.87467667973554,1.34385702559088,0.850650583454319,0.179117045405697,0,3.06706143332169,0,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0,1.06375246633948,0,0.514414748524284,0,0.266422179016099,0.714889968290738,0,0,0.325736184293735,0.355391948742546,0,0.904318131178758,2.61460037580088,1.99945982364114,0,0,0,0.958499421966331,0,0,0.434343920002738,0.61642896765115,0.358121926479791,0,0.197030760201927,0.215627574859517,0,0.508189248444927,0,0,0,0,0,0,0.414415513436035,1.34960640891054,1.50051156317903,0,1.45579603071565,1.42743191037729,2.36553622550902,0.468565659970853,0.902838299183157,0,1.03473071292505,0,1.29058417979192,0.260650843404249,0,0,0.206768026122887,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0.744323423456331,1.53461973288062,1.12264037773229,1.15325234330131,3.07024349440022,1.44768529029247,1.48418066444991,0.154209693802656,0.710246901252508,0.657017248110473,0,0.116210378459959,1.0877350463246,1.60405176242628,0,0.918515585316854,0.546273504020151,1.70461739447251,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,1.08378575017541,2.00675909541941,0,0,0.447749509444357,0,0,0.256450125116389,1.31205858279882,0,0.103041011647722,0.54941678891006,0.247528499761764,1.72279661398852,0.650060246036521,0,0,0.154048617114644,0,0.137836572484531,0,0.435050081742686,0.170453254832202,1.24644849905432,0.165284915360978,0.576570202095319,0.638063562472921,0.30347334256665,0,0,0.6970372701606,0.616067160352178,2.12922412126809,0,1.29726953372744,0.143124886741991,0.744316738719335,0,0.953150969619124,0.767693373934002,0.42793898803392,0,0,0.899362287916574,0.54907405947211,0.589062011728432,0.202182481573316,0,0.842516912477962,2.43816869544795,0,0,0.545999645631943,0.707027159768564,1.13008116620243,1.65409603063837,0,1.31535265576129,0,0,2.43492452355245,1.54911749049875,1.12678241012897,0.573645408816206,1.08073945114433,1.07001315444375,0,0.211107635297664,0.329294892959902,0.379473173765715,0.349934720244983,0,1.34060455107157,0,0.0941438007767792,1.72202149068492,0,0.443430153536676,0.689170200620878,0,0,0.569647187174163,0,0,0,0,0,1.6023610669121,0,1.22520107990516,0.185803175125719,0,0.213425530045242,0.15942627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| |||
|short_description=p3@CNN2 | |||
}} |
Revision as of 18:30, 11 September 2013
Short description: | p3@CNN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CNN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000263097, ENST00000348419, NM_004368, NM_201277, uc002lqt.1, uc002lqu.2, uc002lqv.2, uc010drz.1, uc010xgb.1, uc010xgc.1_5end |
EntrezGene: | CNN2 |
HGNC: | 2156 |
UniProt: | Q99439A6NFI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.07e-08 | 15 |
smooth muscle cell of the umbilical artery | 1.01e-07 | 4 |
adipocyte of omentum tissue | 2.08e-07 | 3 |
embryonic stem cell | 3.46e-07 | 5 |
hair follicle cell | 7.75e-07 | 5 |
hair follicle dermal papilla cell | 8.67e-07 | 3 |
stem cell of epidermis | 8.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.84e-12 | 6 |
peritoneum | 2.84e-12 | 6 |
abdominal cavity | 2.84e-12 | 6 |
visceral peritoneum | 2.84e-12 | 6 |
umbilical artery | 1.01e-07 | 4 |
cavity lining | 1.46e-07 | 12 |
serous membrane | 1.46e-07 | 12 |
hair follicle | 7.75e-07 | 5 |
hair follicle placode | 7.75e-07 | 5 |
dermal papilla | 8.67e-07 | 3 |
papillary layer of dermis | 8.67e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.