FFCP PHASE1:Hg19::chr1:111742823..111742838,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79961|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26192|TSSclassifier=S|UniProt=|association_with_transcript=26bp_to_ENST00000488786_5end|coexpression_cluster_id=C1017|description=CAGE_peak_5_at_DENND2D_5end|id=chr1:111742823..111742838,-|ontology_enrichment_celltype=CL:0002031!6.48e-51!124;CL:0000738!1.12e-49!140;CL:0002087!2.52e-49!119;CL:0000037!6.00e-40!172;CL:0000566!6.00e-40!172;CL:0002032!9.03e-40!165;CL:0000837!9.03e-40!165;CL:0000557!1.56e-38!71;CL:0000839!6.65e-38!70;CL:0000766!2.60e-37!76;CL:0000988!1.10e-35!182;CL:0002194!3.95e-35!63;CL:0000576!3.95e-35!63;CL:0000040!3.95e-35!63;CL:0000559!3.95e-35!63;CL:0002009!7.08e-35!65;CL:0002057!5.91e-31!42;CL:0000860!8.11e-28!45;CL:0000763!2.02e-25!112;CL:0000049!2.02e-25!112;CL:0000838!2.65e-13!52;CL:0000542!7.76e-13!53;CL:0000051!7.76e-13!53;CL:0000791!9.05e-13!18;CL:0000789!9.05e-13!18;CL:0002420!9.05e-13!18;CL:0002419!9.05e-13!18;CL:0000790!9.05e-13!18;CL:0000084!8.44e-10!25;CL:0000827!8.44e-10!25;CL:0000625!1.55e-09!11|ontology_enrichment_celltype_v019=CL:0000473;4.81e-37;39!CL:0000234;4.81e-37;39!CL:0000860;1.35e-34;33!CL:0002057;1.35e-34;33!CL:0000576;5.86e-22;48!CL:0000766;7.06e-21;69!CL:0002087;4.47e-14;104!CL:0000235;1.11e-12;6!CL:0000738;8.93e-12;136!CL:0000763;7.80e-10;100!CL:0000625;2.09e-09;11!CL:0000097;2.66e-09;5!CL:0002619;1.97e-07;3!CL:0000988;5.22e-07;177|ontology_enrichment_celltype_v019_2=CL:0000839,6.44e-52,66;CL:0000557,6.31e-51,67;CL:0002031,2.15e-50,120;CL:0002087,7.70e-49,115;CL:0000766,1.93e-48,72;CL:0000738,2.91e-48,136;CL:0002194,1.99e-46,59;CL:0000576,1.99e-46,59;CL:0000040,1.99e-46,59;CL:0000559,1.99e-46,59;CL:0002009,1.76e-44,61;CL:0000473,1.38e-42,48;CL:0000234,1.38e-42,48;CL:0000037,1.31e-36,168;CL:0002032,3.04e-35,161;CL:0000837,3.04e-35,161;CL:0000988,1.00e-33,177;CL:0000860,1.82e-32,42;CL:0002057,1.82e-32,42;CL:0000763,7.71e-29,108;CL:0000049,7.71e-29,108;CL:0000235,1.09e-12,6;CL:0000625,2.11e-09,11;CL:0000097,2.21e-09,5;CL:0002028,2.21e-09,5;CL:0000134,4.23e-08,354;CL:0002320,1.26e-07,361;CL:0002619,1.99e-07,3;CL:0000838,6.08e-07,52;CL:0000542,9.91e-07,53;CL:0000051,9.91e-07,53|ontology_enrichment_development_v019=CL:0002057;5.40e-25;42!CL:0000049;1.66e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.23e-41!102;UBERON:0003061!3.23e-41!102;UBERON:0002193!9.72e-38!112;UBERON:0002371!1.30e-31!80;UBERON:0001474!7.62e-28!86;UBERON:0002405!3.97e-27!115;UBERON:0007023!1.63e-20!115;UBERON:0004765!1.63e-20!101;UBERON:0001434!1.63e-20!101;UBERON:0003081!2.69e-10!216;UBERON:0004177!5.08e-07!7|ontology_enrichment_uberon_v019=UBERON:0004177;3.86e-09;5!UBERON:0005057;3.86e-09;5!UBERON:0000178;5.07e-09;15!UBERON:0000179;5.07e-09;15!UBERON:0000463;5.07e-09;15!UBERON:0002390;1.76e-07;32!UBERON:0002106;7.98e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.95e-59,98;UBERON:0003061,2.95e-59,98;UBERON:0002193,4.24e-56,108;UBERON:0002405,2.77e-47,93;UBERON:0002371,3.55e-43,76;UBERON:0001474,5.91e-39,82;UBERON:0004765,3.30e-34,90;UBERON:0001434,2.36e-29,100;UBERON:0003081,5.60e-21,203;UBERON:0002204,3.62e-12,167;UBERON:0000178,5.83e-09,15;UBERON:0000179,5.83e-09,15;UBERON:0000463,5.83e-09,15;UBERON:0004177,9.06e-09,7;UBERON:0005057,9.06e-09,7;UBERON:0000926,1.22e-07,315;UBERON:0004120,1.22e-07,315;UBERON:0006603,1.22e-07,315;UBERON:0002384,1.95e-07,371;UBERON:0002106,7.92e-07,3;UBERON:0004854,7.92e-07,3;UBERON:0009034,7.92e-07,3;UBERON:0002095,7.92e-07,3;UBERON:0004782,7.92e-07,3;UBERON:0003281,7.92e-07,3;UBERON:0009664,7.92e-07,3;UBERON:0002296,7.92e-07,3;UBERON:0005602,7.92e-07,3;UBERON:0001179,7.92e-07,3;UBERON:0006293,7.92e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.123663742951,28.3247033602313,30.4610723683939,1.57345710739562,0.383829398097213,0.928896739896456,0,0,0,0,0.284338464974843,0,2.21598163412751,0.401088894940283,0.434021741431704,31.1242509193495,21.3769819572526,28.0757368721263,1.74477886535478,3.02300754951048,0.242584061187816,6.27558399645349,9.04569353648017,7.12324653058738,6.90461741573161,5.89169625016932,6.3850202069918,11.3766074643084,14.846147722428,13.5426486594342,3.38836211176688,4.63940455098338,3.14612878223118,9.48860066349798,6.73950956859797,1.91801137739712,1.9791078011203,3.19141852194611,0.852449501065388,9.57690487474327,15.3194010666608,6.22822248995575,9.2962006144995,6.25779502104242,4.12658804939722,9.6863920421339,20.2552699793161,7.59509729858123,0.633765858935825,0.850417199860174,0.419317291016752,0.112328631146495,0,0.32145117339416,1.14005097496499,0,0.365328307529268,3.51992488922645,0,0,1.28019066769952,0.400395987036012,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0.196709770113833,0.393010762749165,0.411202997999018,3.17654341242288,0.651844533267181,2.8406868344084,1.94826728407911,3.23090324967003,0.294605907474837,0.886135578334485,1.62482318259009,2.68991771423918,3.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79961 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26192 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=26bp_to_ENST00000488786_5end | |||
|coexpression_cluster_id=C1017 | |||
|description=CAGE_peak_5_at_DENND2D_5end | |||
|id=chr1:111742823..111742838,- | |||
|ontology_enrichment_celltype=CL:0002031!6.48e-51!124;CL:0000738!1.12e-49!140;CL:0002087!2.52e-49!119;CL:0000037!6.00e-40!172;CL:0000566!6.00e-40!172;CL:0002032!9.03e-40!165;CL:0000837!9.03e-40!165;CL:0000557!1.56e-38!71;CL:0000839!6.65e-38!70;CL:0000766!2.60e-37!76;CL:0000988!1.10e-35!182;CL:0002194!3.95e-35!63;CL:0000576!3.95e-35!63;CL:0000040!3.95e-35!63;CL:0000559!3.95e-35!63;CL:0002009!7.08e-35!65;CL:0002057!5.91e-31!42;CL:0000860!8.11e-28!45;CL:0000763!2.02e-25!112;CL:0000049!2.02e-25!112;CL:0000838!2.65e-13!52;CL:0000542!7.76e-13!53;CL:0000051!7.76e-13!53;CL:0000791!9.05e-13!18;CL:0000789!9.05e-13!18;CL:0002420!9.05e-13!18;CL:0002419!9.05e-13!18;CL:0000790!9.05e-13!18;CL:0000084!8.44e-10!25;CL:0000827!8.44e-10!25;CL:0000625!1.55e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.81e-37;39!CL:0000234;4.81e-37;39!CL:0000860;1.35e-34;33!CL:0002057;1.35e-34;33!CL:0000576;5.86e-22;48!CL:0000766;7.06e-21;69!CL:0002087;4.47e-14;104!CL:0000235;1.11e-12;6!CL:0000738;8.93e-12;136!CL:0000763;7.80e-10;100!CL:0000625;2.09e-09;11!CL:0000097;2.66e-09;5!CL:0002619;1.97e-07;3!CL:0000988;5.22e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,6.44e-52,66;CL:0000557,6.31e-51,67;CL:0002031,2.15e-50,120;CL:0002087,7.70e-49,115;CL:0000766,1.93e-48,72;CL:0000738,2.91e-48,136;CL:0002194,1.99e-46,59;CL:0000576,1.99e-46,59;CL:0000040,1.99e-46,59;CL:0000559,1.99e-46,59;CL:0002009,1.76e-44,61;CL:0000473,1.38e-42,48;CL:0000234,1.38e-42,48;CL:0000037,1.31e-36,168;CL:0002032,3.04e-35,161;CL:0000837,3.04e-35,161;CL:0000988,1.00e-33,177;CL:0000860,1.82e-32,42;CL:0002057,1.82e-32,42;CL:0000763,7.71e-29,108;CL:0000049,7.71e-29,108;CL:0000235,1.09e-12,6;CL:0000625,2.11e-09,11;CL:0000097,2.21e-09,5;CL:0002028,2.21e-09,5;CL:0000134,4.23e-08,354;CL:0002320,1.26e-07,361;CL:0002619,1.99e-07,3;CL:0000838,6.08e-07,52;CL:0000542,9.91e-07,53;CL:0000051,9.91e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;5.40e-25;42!CL:0000049;1.66e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.23e-41!102;UBERON:0003061!3.23e-41!102;UBERON:0002193!9.72e-38!112;UBERON:0002371!1.30e-31!80;UBERON:0001474!7.62e-28!86;UBERON:0002405!3.97e-27!115;UBERON:0007023!1.63e-20!115;UBERON:0004765!1.63e-20!101;UBERON:0001434!1.63e-20!101;UBERON:0003081!2.69e-10!216;UBERON:0004177!5.08e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;3.86e-09;5!UBERON:0005057;3.86e-09;5!UBERON:0000178;5.07e-09;15!UBERON:0000179;5.07e-09;15!UBERON:0000463;5.07e-09;15!UBERON:0002390;1.76e-07;32!UBERON:0002106;7.98e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.95e-59,98;UBERON:0003061,2.95e-59,98;UBERON:0002193,4.24e-56,108;UBERON:0002405,2.77e-47,93;UBERON:0002371,3.55e-43,76;UBERON:0001474,5.91e-39,82;UBERON:0004765,3.30e-34,90;UBERON:0001434,2.36e-29,100;UBERON:0003081,5.60e-21,203;UBERON:0002204,3.62e-12,167;UBERON:0000178,5.83e-09,15;UBERON:0000179,5.83e-09,15;UBERON:0000463,5.83e-09,15;UBERON:0004177,9.06e-09,7;UBERON:0005057,9.06e-09,7;UBERON:0000926,1.22e-07,315;UBERON:0004120,1.22e-07,315;UBERON:0006603,1.22e-07,315;UBERON:0002384,1.95e-07,371;UBERON:0002106,7.92e-07,3;UBERON:0004854,7.92e-07,3;UBERON:0009034,7.92e-07,3;UBERON:0002095,7.92e-07,3;UBERON:0004782,7.92e-07,3;UBERON:0003281,7.92e-07,3;UBERON:0009664,7.92e-07,3;UBERON:0002296,7.92e-07,3;UBERON:0005602,7.92e-07,3;UBERON:0001179,7.92e-07,3;UBERON:0006293,7.92e-07,3 | |||
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| |||
|short_description=p5@DENND2D | |||
}} |
Revision as of 23:30, 11 September 2013
Short description: | p5@DENND2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_DENND2D_5end |
Coexpression cluster: | C1017_CD14_Macrophage_Monocytederived_Mast_Dendritic_B_splenic |
Association with transcript: | 26bp_to_ENST00000488786_5end |
EntrezGene: | DENND2D |
HGNC: | 26192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.95e-59 | 98 |
blood island | 2.95e-59 | 98 |
hemolymphoid system | 4.24e-56 | 108 |
immune system | 2.77e-47 | 93 |
bone marrow | 3.55e-43 | 76 |
bone element | 5.91e-39 | 82 |
skeletal element | 3.30e-34 | 90 |
skeletal system | 2.36e-29 | 100 |
lateral plate mesoderm | 5.60e-21 | 203 |
musculoskeletal system | 3.62e-12 | 167 |
blood | 5.83e-09 | 15 |
haemolymphatic fluid | 5.83e-09 | 15 |
organism substance | 5.83e-09 | 15 |
hemopoietic organ | 9.06e-09 | 7 |
immune organ | 9.06e-09 | 7 |
mesoderm | 1.22e-07 | 315 |
mesoderm-derived structure | 1.22e-07 | 315 |
presumptive mesoderm | 1.22e-07 | 315 |
connective tissue | 1.95e-07 | 371 |
spleen | 7.92e-07 | 3 |
gastrointestinal system mesentery | 7.92e-07 | 3 |
stomach region | 7.92e-07 | 3 |
mesentery | 7.92e-07 | 3 |
gastrointestinal system serosa | 7.92e-07 | 3 |
mesentery of stomach | 7.92e-07 | 3 |
gut mesentery | 7.92e-07 | 3 |
dorsal mesentery | 7.92e-07 | 3 |
dorsal mesogastrium | 7.92e-07 | 3 |
peritoneal cavity | 7.92e-07 | 3 |
spleen primordium | 7.92e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.