FFCP PHASE1:Hg19::chr1:164600535..164600539,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2538|description=CAGE_peak_at_chr1:164600535..164600539,+|id=chr1:164600535..164600539,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;1.76e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.73e-23!115;UBERON:0001017!5.14e-20!82;UBERON:0005743!5.76e-20!86;UBERON:0000073!3.74e-19!94;UBERON:0001016!3.74e-19!94;UBERON:0002346!1.22e-17!90;UBERON:0000955!4.49e-17!69;UBERON:0006238!4.49e-17!69;UBERON:0001049!6.96e-17!57;UBERON:0005068!6.96e-17!57;UBERON:0006241!6.96e-17!57;UBERON:0007135!6.96e-17!57;UBERON:0003075!1.78e-16!86;UBERON:0007284!1.78e-16!86;UBERON:0002616!3.73e-16!59;UBERON:0002020!1.11e-15!34;UBERON:0003528!1.11e-15!34;UBERON:0002791!1.57e-15!33;UBERON:0001893!1.66e-15!34;UBERON:0000924!1.99e-15!173;UBERON:0006601!1.99e-15!173;UBERON:0002780!2.81e-15!41;UBERON:0001890!2.81e-15!41;UBERON:0006240!2.81e-15!41;UBERON:0003080!1.34e-14!42;UBERON:0001869!1.93e-14!32;UBERON:0004121!2.07e-14!169;UBERON:0000153!1.55e-13!129;UBERON:0007811!1.55e-13!129;UBERON:0000033!2.25e-13!123;UBERON:0000956!6.79e-13!25;UBERON:0000203!6.79e-13!25;UBERON:0003056!4.15e-12!61;UBERON:0002619!1.80e-11!22;UBERON:0001950!4.75e-10!20;UBERON:0000062!1.76e-07!511;UBERON:0000475!2.94e-07!365|ontology_enrichment_uberon_v019=UBERON:0002619;3.39e-13;22!UBERON:0006947;3.64e-13;3!UBERON:0004054;3.64e-13;3!UBERON:0001950;1.32e-11;20!UBERON:0000956;1.74e-11;25!UBERON:0000203;1.74e-11;25!UBERON:0000922;1.96e-10;49!UBERON:0001869;1.97e-10;32!UBERON:0002791;4.90e-10;32!UBERON:0005904;5.45e-10;4!UBERON:0003528;1.27e-09;34!UBERON:0002020;1.27e-09;34!UBERON:0001893;2.77e-08;34!UBERON:0001872;3.59e-08;5!UBERON:0002780;5.11e-07;41!UBERON:0001890;5.11e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.32e-13,3;UBERON:0004054,2.32e-13,3;UBERON:0002619,3.92e-13,22;UBERON:0001950,1.80e-11,20;UBERON:0000956,1.98e-11,25;UBERON:0000203,1.98e-11,25;UBERON:0002791,1.14e-10,32;UBERON:0001869,1.14e-10,32;UBERON:0005904,3.91e-10,4;UBERON:0003528,5.95e-10,34;UBERON:0002020,5.95e-10,34;UBERON:0001893,5.95e-10,34;UBERON:0007023,8.72e-10,114;UBERON:0001872,4.28e-08,5;UBERON:0002780,5.56e-08,41;UBERON:0001890,5.56e-08,41;UBERON:0003080,5.56e-08,41;UBERON:0006240,5.56e-08,41;UBERON:0002346,2.54e-07,86;UBERON:0003056,4.87e-07,61|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0.369363174230364,0,0,0.85870796139317,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,1.03988298880475,0.443458794925128,0.702678285545008,0.654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,0,0,0.397227542439656,1.72101972449288,0,0,0,0.24666754841716,0,0.269421344139376,0.326923806226917,0.151357427644931,0.576175924479999,0,0,0,0,0,0.323745888736263,0,0.408308342509787,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.500474079487857,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.600182192168805,0.103052529238439,0,0,0.843881661206331,0,0.252433774244115,0.368199594569197,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.10366105501537,0,2.18986415445498,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.528290604079356,0.414656231081544,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0.157702415033935,0.35142424497814,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0.920771839728375,0.841980283299221,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0.618246069886334,0.183138929636687,0.165018999841176,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.429680979473094,0.290033387828457,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.953150969619124,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2538 | |||
|description=CAGE_peak_at_chr1:164600535..164600539,+ | |||
|id=chr1:164600535..164600539,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.76e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.73e-23!115;UBERON:0001017!5.14e-20!82;UBERON:0005743!5.76e-20!86;UBERON:0000073!3.74e-19!94;UBERON:0001016!3.74e-19!94;UBERON:0002346!1.22e-17!90;UBERON:0000955!4.49e-17!69;UBERON:0006238!4.49e-17!69;UBERON:0001049!6.96e-17!57;UBERON:0005068!6.96e-17!57;UBERON:0006241!6.96e-17!57;UBERON:0007135!6.96e-17!57;UBERON:0003075!1.78e-16!86;UBERON:0007284!1.78e-16!86;UBERON:0002616!3.73e-16!59;UBERON:0002020!1.11e-15!34;UBERON:0003528!1.11e-15!34;UBERON:0002791!1.57e-15!33;UBERON:0001893!1.66e-15!34;UBERON:0000924!1.99e-15!173;UBERON:0006601!1.99e-15!173;UBERON:0002780!2.81e-15!41;UBERON:0001890!2.81e-15!41;UBERON:0006240!2.81e-15!41;UBERON:0003080!1.34e-14!42;UBERON:0001869!1.93e-14!32;UBERON:0004121!2.07e-14!169;UBERON:0000153!1.55e-13!129;UBERON:0007811!1.55e-13!129;UBERON:0000033!2.25e-13!123;UBERON:0000956!6.79e-13!25;UBERON:0000203!6.79e-13!25;UBERON:0003056!4.15e-12!61;UBERON:0002619!1.80e-11!22;UBERON:0001950!4.75e-10!20;UBERON:0000062!1.76e-07!511;UBERON:0000475!2.94e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.39e-13;22!UBERON:0006947;3.64e-13;3!UBERON:0004054;3.64e-13;3!UBERON:0001950;1.32e-11;20!UBERON:0000956;1.74e-11;25!UBERON:0000203;1.74e-11;25!UBERON:0000922;1.96e-10;49!UBERON:0001869;1.97e-10;32!UBERON:0002791;4.90e-10;32!UBERON:0005904;5.45e-10;4!UBERON:0003528;1.27e-09;34!UBERON:0002020;1.27e-09;34!UBERON:0001893;2.77e-08;34!UBERON:0001872;3.59e-08;5!UBERON:0002780;5.11e-07;41!UBERON:0001890;5.11e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.32e-13,3;UBERON:0004054,2.32e-13,3;UBERON:0002619,3.92e-13,22;UBERON:0001950,1.80e-11,20;UBERON:0000956,1.98e-11,25;UBERON:0000203,1.98e-11,25;UBERON:0002791,1.14e-10,32;UBERON:0001869,1.14e-10,32;UBERON:0005904,3.91e-10,4;UBERON:0003528,5.95e-10,34;UBERON:0002020,5.95e-10,34;UBERON:0001893,5.95e-10,34;UBERON:0007023,8.72e-10,114;UBERON:0001872,4.28e-08,5;UBERON:0002780,5.56e-08,41;UBERON:0001890,5.56e-08,41;UBERON:0003080,5.56e-08,41;UBERON:0006240,5.56e-08,41;UBERON:0002346,2.54e-07,86;UBERON:0003056,4.87e-07,61 | |||
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| |||
|short_description=p@chr1:164600535..164600539,+ | |||
}} |
Revision as of 01:31, 12 September 2013
Short description: | p@chr1:164600535..164600539, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:164600535..164600539, + |
Coexpression cluster: | C2538_parietal_occipital_uterus_cervix_rectum_brain_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.32e-13 | 3 |
internal male genitalia | 2.32e-13 | 3 |
regional part of cerebral cortex | 3.92e-13 | 22 |
neocortex | 1.80e-11 | 20 |
cerebral cortex | 1.98e-11 | 25 |
pallium | 1.98e-11 | 25 |
regional part of telencephalon | 1.14e-10 | 32 |
cerebral hemisphere | 1.14e-10 | 32 |
duct of male reproductive system | 3.91e-10 | 4 |
brain grey matter | 5.95e-10 | 34 |
gray matter | 5.95e-10 | 34 |
telencephalon | 5.95e-10 | 34 |
adult organism | 8.72e-10 | 114 |
parietal lobe | 4.28e-08 | 5 |
regional part of forebrain | 5.56e-08 | 41 |
forebrain | 5.56e-08 | 41 |
anterior neural tube | 5.56e-08 | 41 |
future forebrain | 5.56e-08 | 41 |
neurectoderm | 2.54e-07 | 86 |
pre-chordal neural plate | 4.87e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.