FFCP PHASE1:Hg19::chr1:22178924..22178946,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:22178924..22178946,-|id=chr1:22178924..22178946,-|ontology_enrichment_celltype=CL:0000945!2.03e-39!24;CL:0000826!2.03e-39!24;CL:0000542!3.65e-24!53;CL:0000051!3.65e-24!53;CL:0000037!2.53e-22!172;CL:0000566!2.53e-22!172;CL:0000838!3.32e-22!52;CL:0000988!1.58e-20!182;CL:0002032!2.82e-18!165;CL:0000837!2.82e-18!165;CL:0000236!3.10e-17!14;CL:0000738!1.87e-16!140;CL:0002274!7.46e-16!5;CL:0000457!7.46e-16!5;CL:0002191!7.46e-16!5;CL:0000097!7.46e-16!5;CL:0000831!7.46e-16!5;CL:0002028!7.46e-16!5;CL:0002031!5.85e-13!124;CL:0002087!1.89e-11!119;CL:0000784!4.16e-11!3;CL:0000163!1.18e-08!9;CL:0000785!5.71e-07!2;CL:0000955!5.71e-07!2;CL:0000818!5.71e-07!2;CL:0000954!5.71e-07!2;CL:0000816!5.71e-07!2|ontology_enrichment_celltype_v019=CL:0000784;1.06e-33;3!CL:0000945;1.21e-21;24!CL:0000236;1.45e-13;13!CL:0000542;6.27e-13;53!CL:0002127;1.25e-12;1!CL:0000911;1.25e-12;1!CL:0000814;1.25e-12;1!CL:0002032;3.64e-12;1!CL:0000557;3.64e-12;1!CL:0000451;1.19e-09;10|ontology_enrichment_celltype_v019_2=CL:0000784,1.48e-33,3;CL:0000945,1.21e-21,24;CL:0000826,1.21e-21,24;CL:0000542,1.63e-19,53;CL:0000051,1.63e-19,53;CL:0000838,4.72e-16,52;CL:0000037,1.27e-14,168;CL:0000738,7.04e-14,136;CL:0000988,8.99e-14,177;CL:0002127,1.11e-12,1;CL:0000914,1.11e-12,1;CL:0000911,1.11e-12,1;CL:0000814,1.11e-12,1;CL:0002042,1.11e-12,1;CL:0002039,1.11e-12,1;CL:0002040,1.11e-12,1;CL:0002041,1.11e-12,1;CL:0000236,1.37e-12,14;CL:0002032,2.03e-11,161;CL:0000837,2.03e-11,161;CL:0002087,5.32e-10,115;CL:0000451,1.30e-09,10;CL:0002031,1.57e-09,120;CL:0000893,5.73e-07,2;CL:0002489,5.73e-07,2;CL:0000809,5.73e-07,2;CL:0000808,5.73e-07,2;CL:0000894,5.73e-07,2;CL:0000806,5.73e-07,2;CL:0000807,5.73e-07,2;CL:0000805,5.73e-07,2;CL:0002425,5.73e-07,2|ontology_enrichment_development_v019=CL:0000051;6.27e-13;53!CL:0002425;6.07e-07;2|ontology_enrichment_disease=DOID:2531!7.64e-16!51;DOID:0060083!7.64e-16!51;DOID:0060058!2.46e-11!10;DOID:1240!4.11e-09!39|ontology_enrichment_disease_v019=DOID:4960;8.35e-13;1!DOID:0070004;8.35e-13;1!DOID:12603;9.92e-13;1!DOID:2355;1.96e-12;1!DOID:0060058;9.54e-11;10!DOID:2531;7.08e-07;51!DOID:0060083;7.08e-07;51!DOID:74;7.61e-07;2|ontology_enrichment_disease_v019_2=DOID:4960,8.85e-13,1;DOID:0070004,8.85e-13,1;DOID:12603,9.92e-13,1;DOID:2355,1.75e-12,1;DOID:0060058,9.23e-11,10;DOID:2531,3.29e-10,51;DOID:0060083,3.29e-10,51;DOID:74,7.20e-07,2|ontology_enrichment_uberon=UBERON:0004177!5.64e-16!7;UBERON:0002106!1.08e-10!3;UBERON:0004854!1.08e-10!3;UBERON:0009034!1.08e-10!3;UBERON:0002095!1.08e-10!3;UBERON:0004782!1.08e-10!3;UBERON:0003281!1.08e-10!3;UBERON:0009664!1.08e-10!3;UBERON:0002296!1.08e-10!3;UBERON:0005602!1.08e-10!3;UBERON:0001179!1.08e-10!3;UBERON:0006293!1.08e-10!3;UBERON:0002370!1.92e-07!4;UBERON:0005058!1.92e-07!4;UBERON:0009113!1.92e-07!4;UBERON:0003295!1.92e-07!4;UBERON:0005562!1.92e-07!4;UBERON:0000974!2.16e-07!10;UBERON:0000341!5.54e-07!2;UBERON:0000945!8.80e-07!8;UBERON:0010039!8.80e-07!8|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.22e-07,7;UBERON:0005057,2.22e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.0821005894499457,0.472264687882075,0,0,0,0,0,0,0.92960640696362,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0.800791974072025,1.72425731986345,0,0.954053754535364,1.1384259382189,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0.445641827540694,0,0,0,0.896639238079726,0.780356085359269,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,2.14641561874808,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,6.95582628704486,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58672460779287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75989842889728,0,0,0,0.399158742865633,0,0.211673582723883,0,0,0,0,0,0,0.481764225311099,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,9.58413104786314,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,1.72318727645497,0,0,0,2.55786185113436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,3.35939774226505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.544169227111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.845855261818682,0.515663103788617,3.49794045737251,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.5388164241167,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.961705476909699|short_description=p@chr1:22178924..22178946,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:22178924..22178946,- | |||
|id=chr1:22178924..22178946,- | |||
|ontology_enrichment_celltype=CL:0000945!2.03e-39!24;CL:0000826!2.03e-39!24;CL:0000542!3.65e-24!53;CL:0000051!3.65e-24!53;CL:0000037!2.53e-22!172;CL:0000566!2.53e-22!172;CL:0000838!3.32e-22!52;CL:0000988!1.58e-20!182;CL:0002032!2.82e-18!165;CL:0000837!2.82e-18!165;CL:0000236!3.10e-17!14;CL:0000738!1.87e-16!140;CL:0002274!7.46e-16!5;CL:0000457!7.46e-16!5;CL:0002191!7.46e-16!5;CL:0000097!7.46e-16!5;CL:0000831!7.46e-16!5;CL:0002028!7.46e-16!5;CL:0002031!5.85e-13!124;CL:0002087!1.89e-11!119;CL:0000784!4.16e-11!3;CL:0000163!1.18e-08!9;CL:0000785!5.71e-07!2;CL:0000955!5.71e-07!2;CL:0000818!5.71e-07!2;CL:0000954!5.71e-07!2;CL:0000816!5.71e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.06e-33;3!CL:0000945;1.21e-21;24!CL:0000236;1.45e-13;13!CL:0000542;6.27e-13;53!CL:0002127;1.25e-12;1!CL:0000911;1.25e-12;1!CL:0000814;1.25e-12;1!CL:0002032;3.64e-12;1!CL:0000557;3.64e-12;1!CL:0000451;1.19e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.48e-33,3;CL:0000945,1.21e-21,24;CL:0000826,1.21e-21,24;CL:0000542,1.63e-19,53;CL:0000051,1.63e-19,53;CL:0000838,4.72e-16,52;CL:0000037,1.27e-14,168;CL:0000738,7.04e-14,136;CL:0000988,8.99e-14,177;CL:0002127,1.11e-12,1;CL:0000914,1.11e-12,1;CL:0000911,1.11e-12,1;CL:0000814,1.11e-12,1;CL:0002042,1.11e-12,1;CL:0002039,1.11e-12,1;CL:0002040,1.11e-12,1;CL:0002041,1.11e-12,1;CL:0000236,1.37e-12,14;CL:0002032,2.03e-11,161;CL:0000837,2.03e-11,161;CL:0002087,5.32e-10,115;CL:0000451,1.30e-09,10;CL:0002031,1.57e-09,120;CL:0000893,5.73e-07,2;CL:0002489,5.73e-07,2;CL:0000809,5.73e-07,2;CL:0000808,5.73e-07,2;CL:0000894,5.73e-07,2;CL:0000806,5.73e-07,2;CL:0000807,5.73e-07,2;CL:0000805,5.73e-07,2;CL:0002425,5.73e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;6.27e-13;53!CL:0002425;6.07e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!7.64e-16!51;DOID:0060083!7.64e-16!51;DOID:0060058!2.46e-11!10;DOID:1240!4.11e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:4960;8.35e-13;1!DOID:0070004;8.35e-13;1!DOID:12603;9.92e-13;1!DOID:2355;1.96e-12;1!DOID:0060058;9.54e-11;10!DOID:2531;7.08e-07;51!DOID:0060083;7.08e-07;51!DOID:74;7.61e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,8.85e-13,1;DOID:0070004,8.85e-13,1;DOID:12603,9.92e-13,1;DOID:2355,1.75e-12,1;DOID:0060058,9.23e-11,10;DOID:2531,3.29e-10,51;DOID:0060083,3.29e-10,51;DOID:74,7.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.64e-16!7;UBERON:0002106!1.08e-10!3;UBERON:0004854!1.08e-10!3;UBERON:0009034!1.08e-10!3;UBERON:0002095!1.08e-10!3;UBERON:0004782!1.08e-10!3;UBERON:0003281!1.08e-10!3;UBERON:0009664!1.08e-10!3;UBERON:0002296!1.08e-10!3;UBERON:0005602!1.08e-10!3;UBERON:0001179!1.08e-10!3;UBERON:0006293!1.08e-10!3;UBERON:0002370!1.92e-07!4;UBERON:0005058!1.92e-07!4;UBERON:0009113!1.92e-07!4;UBERON:0003295!1.92e-07!4;UBERON:0005562!1.92e-07!4;UBERON:0000974!2.16e-07!10;UBERON:0000341!5.54e-07!2;UBERON:0000945!8.80e-07!8;UBERON:0010039!8.80e-07!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.22e-07,7;UBERON:0005057,2.22e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.0821005894499457,0.472264687882075,0,0,0,0,0,0,0.92960640696362,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,0.800791974072025,1.72425731986345,0,0.954053754535364,1.1384259382189,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0.445641827540694,0,0,0,0.896639238079726,0.780356085359269,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,2.14641561874808,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,6.95582628704486,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58672460779287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75989842889728,0,0,0,0.399158742865633,0,0.211673582723883,0,0,0,0,0,0,0.481764225311099,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,9.58413104786314,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,1.72318727645497,0,0,0,2.55786185113436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,3.35939774226505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.544169227111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.845855261818682,0.515663103788617,3.49794045737251,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.5388164241167,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p@chr1:22178924..22178946,- | |||
}} |
Revision as of 03:46, 12 September 2013
Short description: | p@chr1:22178924..22178946, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:22178924..22178946, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.22e-07 | 7 |
immune organ | 2.22e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 8.85e-13 | 1 |
myeloma | 8.85e-13 | 1 |
acute leukemia | 9.92e-13 | 1 |
anemia | 1.75e-12 | 1 |
lymphoma | 9.23e-11 | 10 |
hematologic cancer | 3.29e-10 | 51 |
immune system cancer | 3.29e-10 | 51 |
hematopoietic system disease | 7.20e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.