FFCP PHASE1:Hg19::chr20:9049723..9049741,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5332|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9059|TSSclassifier=S|UniProt=B1AJW2|association_with_transcript=-6bp_to_ENST00000437503_5end|coexpression_cluster_id=C1071|description=CAGE_peak_2_at_PLCB4_5end|id=chr20:9049723..9049741,+|ontology_enrichment_celltype=CL:0002620!5.05e-09!23;CL:0000057!1.12e-07!75|ontology_enrichment_celltype_v019=CL:1000497;1.78e-10;17!CL:0002518;1.78e-10;17!CL:1000507;3.89e-10;10!CL:1000494;3.89e-10;10!CL:1000449;1.01e-08;15!CL:0002556;4.23e-08;6!CL:0002620;7.15e-08;23!CL:0002681;1.61e-07;12!CL:0002584;1.61e-07;12|ontology_enrichment_celltype_v019_2=CL:1000497,1.34e-10,17;CL:0002518,1.34e-10,17;CL:1000507,3.36e-10,10;CL:1000494,3.36e-10,10;CL:1000449,8.24e-09,15;CL:0000057,1.95e-08,76;CL:0002556,3.37e-08,6;CL:0002620,6.57e-08,23;CL:0002681,1.37e-07,12;CL:0002584,1.37e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!6.84e-13!365;UBERON:0007023!1.10e-12!115;UBERON:0000481!5.25e-12!347;UBERON:0000062!2.69e-10!511;UBERON:0000153!2.69e-09!129;UBERON:0007811!2.69e-09!129;UBERON:0004121!4.78e-09!169;UBERON:0000033!7.29e-09!123;UBERON:0000064!8.06e-09!219;UBERON:0000924!1.33e-08!173;UBERON:0006601!1.33e-08!173;UBERON:0003102!1.87e-08!95;UBERON:0002097!6.86e-08!40;UBERON:0000468!1.97e-07!659|ontology_enrichment_uberon_v019=UBERON:0004211;3.89e-10;10!UBERON:0009773;3.89e-10;10!UBERON:0001231;3.89e-10;10!UBERON:0004810;3.89e-10;10!UBERON:0006555;1.01e-08;15!UBERON:0004819;1.01e-08;15!UBERON:0001285;1.01e-08;15!UBERON:0007684;1.01e-08;15!UBERON:0001758;4.23e-08;6!UBERON:0003672;4.23e-08;6!UBERON:0001225;1.61e-07;12!UBERON:0008987;1.61e-07;12!UBERON:0001737;3.31e-07;9!UBERON:0001557;3.31e-07;9!UBERON:0011137;7.14e-07;11!UBERON:0010323;7.14e-07;11!UBERON:0003129;9.14e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.36e-10,10;UBERON:0006555,1.54e-09,16;UBERON:0004819,1.54e-09,16;UBERON:0004211,8.24e-09,15;UBERON:0009773,8.24e-09,15;UBERON:0001231,8.24e-09,15;UBERON:0001285,8.24e-09,15;UBERON:0007684,8.24e-09,15;UBERON:0004208,8.24e-09,15;UBERON:0001758,3.37e-08,6;UBERON:0003672,3.37e-08,6;UBERON:0002113,9.60e-08,26;UBERON:0003918,9.60e-08,26;UBERON:0011143,9.60e-08,26;UBERON:0005095,9.60e-08,26;UBERON:0007687,9.60e-08,26;UBERON:0001225,1.37e-07,12;UBERON:0008987,1.37e-07,12;UBERON:0000165,2.29e-07,29;UBERON:0000930,2.29e-07,29;UBERON:0001737,2.84e-07,9;UBERON:0001444,4.20e-07,49;UBERON:0010323,6.30e-07,11;UBERON:0003129,7.56e-07,7;UBERON:0003102,7.72e-07,99|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,2.00146596706261,0.446961094427288,0,0,0,0,3.19454117451962,1.39560233594486,0,0,0.123766352960047,0.331397375727916,1.34465029290355,1.20538905604795,0.730310090387373,0.975865597581014,0.123121058076788,0.816002764977012,0,0,0,0.87879847716362,0,0,0,0.393364276848904,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.289693037921647,0,0,0.472674085820339,1.77383517970051,2.3715392137144,1.11332214173056,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,4.47274756525787,0.12663051166458,1.05927344650575,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0.298897361103602,0.587172493218824,1.45685649931318,0.702254033511242,2.85815839756851,2.94802361548243,0.723280468230358,7.12801714369232,22.5012905643487,0,0.718618141816238,2.86171393721913,2.50237039743928,14.6843981206617,10.9744405220209,15.324389789951,11.7185685947146,0,31.7519655169286,7.26095121983129,2.54318281391474,4.20127534518163,2.26715564324566,28.5980999450648,7.81690796592677,3.20675031258406,0.68205903612839,10.3497847440087,3.49789614840738,0.323292113637624,8.87523981291536,6.54888638479662,2.7129694769678,0.386521706326594,0.272746120590835,0.860413786167011,0.243947412259191,0,0.348581828608555,0.932949495138334,0.252320850875628,0,0,9.64861407289328,1.38134921352481,2.78620756819187,0.721879481669586,4.49565840151407,2.52877035117153,3.61516544825223,4.41175890929576,2.83243277320128,2.84724742933316,2.29213223872279,1.17732879075208,0.769494313892781,0,0,0,0,0,0,0,0,0,1.3725424823882,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,4.10930429825376,0.144366447761074,0,0,0,0,0,0,0,0,5.20744597416465,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0.6312121671319,0,0,0,0,0.719792448923265,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,1.67737398844108,1.14861935834114,0,13.0303176000821,2.05476322550383,7.34149949283572,0,0,0,0,0.76228387266739,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,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633146,0,0,0,5.74534787659472,2.03448089157869,0.665756774185513,1.00636896795513,0|short_description=p2@PLCB4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9059 | |||
|TSSclassifier=S | |||
|UniProt=B1AJW2 | |||
|association_with_transcript=-6bp_to_ENST00000437503_5end | |||
|coexpression_cluster_id=C1071 | |||
|description=CAGE_peak_2_at_PLCB4_5end | |||
|id=chr20:9049723..9049741,+ | |||
|ontology_enrichment_celltype=CL:0002620!5.05e-09!23;CL:0000057!1.12e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.78e-10;17!CL:0002518;1.78e-10;17!CL:1000507;3.89e-10;10!CL:1000494;3.89e-10;10!CL:1000449;1.01e-08;15!CL:0002556;4.23e-08;6!CL:0002620;7.15e-08;23!CL:0002681;1.61e-07;12!CL:0002584;1.61e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.34e-10,17;CL:0002518,1.34e-10,17;CL:1000507,3.36e-10,10;CL:1000494,3.36e-10,10;CL:1000449,8.24e-09,15;CL:0000057,1.95e-08,76;CL:0002556,3.37e-08,6;CL:0002620,6.57e-08,23;CL:0002681,1.37e-07,12;CL:0002584,1.37e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.84e-13!365;UBERON:0007023!1.10e-12!115;UBERON:0000481!5.25e-12!347;UBERON:0000062!2.69e-10!511;UBERON:0000153!2.69e-09!129;UBERON:0007811!2.69e-09!129;UBERON:0004121!4.78e-09!169;UBERON:0000033!7.29e-09!123;UBERON:0000064!8.06e-09!219;UBERON:0000924!1.33e-08!173;UBERON:0006601!1.33e-08!173;UBERON:0003102!1.87e-08!95;UBERON:0002097!6.86e-08!40;UBERON:0000468!1.97e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.89e-10;10!UBERON:0009773;3.89e-10;10!UBERON:0001231;3.89e-10;10!UBERON:0004810;3.89e-10;10!UBERON:0006555;1.01e-08;15!UBERON:0004819;1.01e-08;15!UBERON:0001285;1.01e-08;15!UBERON:0007684;1.01e-08;15!UBERON:0001758;4.23e-08;6!UBERON:0003672;4.23e-08;6!UBERON:0001225;1.61e-07;12!UBERON:0008987;1.61e-07;12!UBERON:0001737;3.31e-07;9!UBERON:0001557;3.31e-07;9!UBERON:0011137;7.14e-07;11!UBERON:0010323;7.14e-07;11!UBERON:0003129;9.14e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.36e-10,10;UBERON:0006555,1.54e-09,16;UBERON:0004819,1.54e-09,16;UBERON:0004211,8.24e-09,15;UBERON:0009773,8.24e-09,15;UBERON:0001231,8.24e-09,15;UBERON:0001285,8.24e-09,15;UBERON:0007684,8.24e-09,15;UBERON:0004208,8.24e-09,15;UBERON:0001758,3.37e-08,6;UBERON:0003672,3.37e-08,6;UBERON:0002113,9.60e-08,26;UBERON:0003918,9.60e-08,26;UBERON:0011143,9.60e-08,26;UBERON:0005095,9.60e-08,26;UBERON:0007687,9.60e-08,26;UBERON:0001225,1.37e-07,12;UBERON:0008987,1.37e-07,12;UBERON:0000165,2.29e-07,29;UBERON:0000930,2.29e-07,29;UBERON:0001737,2.84e-07,9;UBERON:0001444,4.20e-07,49;UBERON:0010323,6.30e-07,11;UBERON:0003129,7.56e-07,7;UBERON:0003102,7.72e-07,99 | |||
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| |||
|short_description=p2@PLCB4 | |||
}} |
Revision as of 09:44, 12 September 2013
Short description: | p2@PLCB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PLCB4_5end |
Coexpression cluster: | C1071_renal_serous_Olfactory_clear_mesothelioma_Fibroblast_mesenchymal |
Association with transcript: | -6bp_to_ENST00000437503_5end |
EntrezGene: | PLCB4 |
HGNC: | 9059 |
UniProt: | B1AJW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.34e-10 | 17 |
kidney epithelial cell | 1.34e-10 | 17 |
kidney tubule cell | 3.36e-10 | 10 |
nephron tubule epithelial cell | 3.36e-10 | 10 |
epithelial cell of nephron | 8.24e-09 | 15 |
fibroblast | 1.95e-08 | 76 |
fibroblast of periodontium | 3.37e-08 | 6 |
skin fibroblast | 6.57e-08 | 23 |
kidney cortical cell | 1.37e-07 | 12 |
renal cortical epithelial cell | 1.37e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.36e-10 | 10 |
excretory tube | 1.54e-09 | 16 |
kidney epithelium | 1.54e-09 | 16 |
nephron epithelium | 8.24e-09 | 15 |
renal tubule | 8.24e-09 | 15 |
nephron tubule | 8.24e-09 | 15 |
nephron | 8.24e-09 | 15 |
uriniferous tubule | 8.24e-09 | 15 |
nephrogenic mesenchyme | 8.24e-09 | 15 |
periodontium | 3.37e-08 | 6 |
dentition | 3.37e-08 | 6 |
kidney | 9.60e-08 | 26 |
kidney mesenchyme | 9.60e-08 | 26 |
upper urinary tract | 9.60e-08 | 26 |
kidney rudiment | 9.60e-08 | 26 |
kidney field | 9.60e-08 | 26 |
cortex of kidney | 1.37e-07 | 12 |
renal parenchyma | 1.37e-07 | 12 |
mouth | 2.29e-07 | 29 |
stomodeum | 2.29e-07 | 29 |
larynx | 2.84e-07 | 9 |
subdivision of head | 4.20e-07 | 49 |
cranial skeletal system | 6.30e-07 | 11 |
skull | 7.56e-07 | 7 |
surface structure | 7.72e-07 | 99 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.