FFCP PHASE1:Hg19::chr2:114299044..114299050,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-463bp_to_ENST00000421970_5end|coexpression_cluster_id=C48|description=CAGE_peak_1_at_ENST00000421970_5end|id=chr2:114299044..114299050,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002622;3.14e-13;3|ontology_enrichment_celltype_v019_2=CL:0002622,6.84e-13,3|ontology_enrichment_development_v019=UBERON:0007297;3.97e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.70e-44!115;UBERON:0005743!3.23e-13!86;UBERON:0000955!3.66e-12!69;UBERON:0006238!3.66e-12!69;UBERON:0002346!8.37e-12!90;UBERON:0001049!1.18e-11!57;UBERON:0005068!1.18e-11!57;UBERON:0006241!1.18e-11!57;UBERON:0007135!1.18e-11!57;UBERON:0003075!2.90e-11!86;UBERON:0007284!2.90e-11!86;UBERON:0001017!8.20e-11!82;UBERON:0002616!9.02e-11!59;UBERON:0000073!9.33e-11!94;UBERON:0001016!9.33e-11!94;UBERON:0000062!1.72e-09!511;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129;UBERON:0003101!9.20e-08!22;UBERON:0000079!9.20e-08!22;UBERON:0002780!9.59e-08!41;UBERON:0001890!9.59e-08!41;UBERON:0006240!9.59e-08!41;UBERON:0000162!1.53e-07!14;UBERON:0001353!1.53e-07!14;UBERON:0000163!1.53e-07!14;UBERON:0006866!1.53e-07!14;UBERON:0000164!1.53e-07!14;UBERON:0000931!1.53e-07!14;UBERON:0000033!1.84e-07!123;UBERON:0000481!1.93e-07!347;UBERON:0003080!2.03e-07!42;UBERON:0001046!2.17e-07!19;UBERON:0003937!3.58e-07!12;UBERON:0005399!3.58e-07!12;UBERON:0000468!3.71e-07!659;UBERON:0000475!5.27e-07!365;UBERON:0003056!7.08e-07!61;UBERON:0004122!7.54e-07!15|ontology_enrichment_uberon_v019=UBERON:0003937;4.41e-12;12!UBERON:0005399;4.41e-12;12!UBERON:0003296;9.45e-10;4!UBERON:0010133;9.45e-10;4!UBERON:0002367;1.97e-09;11!UBERON:0010147;1.97e-09;11!UBERON:0001905;3.97e-09;2!UBERON:0002757;3.97e-09;2!UBERON:0010134;3.97e-09;2!UBERON:0005408;3.97e-09;2!UBERON:0001899;3.97e-09;2!UBERON:0003101;2.12e-08;22!UBERON:0000079;2.12e-08;22!UBERON:0000160;7.74e-08;17!UBERON:0000922;2.85e-07;49!UBERON:0000077;8.73e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0000162,4.09e-14,14;UBERON:0001353,4.09e-14,14;UBERON:0000163,4.09e-14,14;UBERON:0006866,4.09e-14,14;UBERON:0000164,4.09e-14,14;UBERON:0000931,4.09e-14,14;UBERON:0007023,5.98e-14,114;UBERON:0001046,2.76e-13,19;UBERON:0004122,4.16e-13,15;UBERON:0003937,5.49e-12,12;UBERON:0005399,5.49e-12,12;UBERON:0003064,1.29e-10,28;UBERON:0003296,7.02e-10,4;UBERON:0010133,7.02e-10,4;UBERON:0001905,1.89e-09,2;UBERON:0002757,1.89e-09,2;UBERON:0010134,1.89e-09,2;UBERON:0005408,1.89e-09,2;UBERON:0001899,1.89e-09,2;UBERON:0002367,2.19e-09,11;UBERON:0010147,2.19e-09,11;UBERON:0009846,2.19e-09,11;UBERON:0003353,2.19e-09,11;UBERON:0004902,2.19e-09,11;UBERON:0003820,2.19e-09,11;UBERON:0009847,2.19e-09,11;UBERON:0003101,2.45e-08,22;UBERON:0000079,2.45e-08,22;UBERON:0000160,8.15e-08,17;UBERON:0005156,1.16e-07,59;UBERON:0000990,1.16e-07,59;UBERON:0001008,7.07e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0.484938170456436,0,0.10075209822764,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,2.25897397617015,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,1.26295892981067,1.0925470080403,2.62248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.784306353074702,1.28225062558195,0.984043937099117,0.325378394664303,0.721287081534056,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0.62962469366128,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0.855877976067841,0,0,0.899362287916574,0.823611089208164,0.471249609382746,0.202182481573316,0,0,0.48763373908959,0,0,0.545999645631943,1.83827061539827,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0,0,1.06428319221179,0.633322905892992,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-463bp_to_ENST00000421970_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_1_at_ENST00000421970_5end | |||
|id=chr2:114299044..114299050,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002622;3.14e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,6.84e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.97e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.70e-44!115;UBERON:0005743!3.23e-13!86;UBERON:0000955!3.66e-12!69;UBERON:0006238!3.66e-12!69;UBERON:0002346!8.37e-12!90;UBERON:0001049!1.18e-11!57;UBERON:0005068!1.18e-11!57;UBERON:0006241!1.18e-11!57;UBERON:0007135!1.18e-11!57;UBERON:0003075!2.90e-11!86;UBERON:0007284!2.90e-11!86;UBERON:0001017!8.20e-11!82;UBERON:0002616!9.02e-11!59;UBERON:0000073!9.33e-11!94;UBERON:0001016!9.33e-11!94;UBERON:0000062!1.72e-09!511;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129;UBERON:0003101!9.20e-08!22;UBERON:0000079!9.20e-08!22;UBERON:0002780!9.59e-08!41;UBERON:0001890!9.59e-08!41;UBERON:0006240!9.59e-08!41;UBERON:0000162!1.53e-07!14;UBERON:0001353!1.53e-07!14;UBERON:0000163!1.53e-07!14;UBERON:0006866!1.53e-07!14;UBERON:0000164!1.53e-07!14;UBERON:0000931!1.53e-07!14;UBERON:0000033!1.84e-07!123;UBERON:0000481!1.93e-07!347;UBERON:0003080!2.03e-07!42;UBERON:0001046!2.17e-07!19;UBERON:0003937!3.58e-07!12;UBERON:0005399!3.58e-07!12;UBERON:0000468!3.71e-07!659;UBERON:0000475!5.27e-07!365;UBERON:0003056!7.08e-07!61;UBERON:0004122!7.54e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003937;4.41e-12;12!UBERON:0005399;4.41e-12;12!UBERON:0003296;9.45e-10;4!UBERON:0010133;9.45e-10;4!UBERON:0002367;1.97e-09;11!UBERON:0010147;1.97e-09;11!UBERON:0001905;3.97e-09;2!UBERON:0002757;3.97e-09;2!UBERON:0010134;3.97e-09;2!UBERON:0005408;3.97e-09;2!UBERON:0001899;3.97e-09;2!UBERON:0003101;2.12e-08;22!UBERON:0000079;2.12e-08;22!UBERON:0000160;7.74e-08;17!UBERON:0000922;2.85e-07;49!UBERON:0000077;8.73e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000162,4.09e-14,14;UBERON:0001353,4.09e-14,14;UBERON:0000163,4.09e-14,14;UBERON:0006866,4.09e-14,14;UBERON:0000164,4.09e-14,14;UBERON:0000931,4.09e-14,14;UBERON:0007023,5.98e-14,114;UBERON:0001046,2.76e-13,19;UBERON:0004122,4.16e-13,15;UBERON:0003937,5.49e-12,12;UBERON:0005399,5.49e-12,12;UBERON:0003064,1.29e-10,28;UBERON:0003296,7.02e-10,4;UBERON:0010133,7.02e-10,4;UBERON:0001905,1.89e-09,2;UBERON:0002757,1.89e-09,2;UBERON:0010134,1.89e-09,2;UBERON:0005408,1.89e-09,2;UBERON:0001899,1.89e-09,2;UBERON:0002367,2.19e-09,11;UBERON:0010147,2.19e-09,11;UBERON:0009846,2.19e-09,11;UBERON:0003353,2.19e-09,11;UBERON:0004902,2.19e-09,11;UBERON:0003820,2.19e-09,11;UBERON:0009847,2.19e-09,11;UBERON:0003101,2.45e-08,22;UBERON:0000079,2.45e-08,22;UBERON:0000160,8.15e-08,17;UBERON:0005156,1.16e-07,59;UBERON:0000990,1.16e-07,59;UBERON:0001008,7.07e-07,48 | |||
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|short_description=p1@ENST00000421970 | |||
}} |
Revision as of 13:09, 12 September 2013
Short description: | p1@ENST00000421970 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000421970_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -463bp_to_ENST00000421970_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 6.84e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
cloaca | 4.09e-14 | 14 |
anal region | 4.09e-14 | 14 |
embryonic cloaca | 4.09e-14 | 14 |
terminal part of digestive tract | 4.09e-14 | 14 |
primitive urogenital sinus | 4.09e-14 | 14 |
proctodeum | 4.09e-14 | 14 |
adult organism | 5.98e-14 | 114 |
hindgut | 2.76e-13 | 19 |
genitourinary system | 4.16e-13 | 15 |
sex gland | 5.49e-12 | 12 |
male reproductive gland | 5.49e-12 | 12 |
intermediate mesoderm | 1.29e-10 | 28 |
gland of diencephalon | 7.02e-10 | 4 |
neuroendocrine gland | 7.02e-10 | 4 |
pineal body | 1.89e-09 | 2 |
regional part of epithalamus | 1.89e-09 | 2 |
secretory circumventricular organ | 1.89e-09 | 2 |
circumventricular organ | 1.89e-09 | 2 |
epithalamus | 1.89e-09 | 2 |
prostate gland | 2.19e-09 | 11 |
male accessory sex gland | 2.19e-09 | 11 |
embryonic cloacal epithelium | 2.19e-09 | 11 |
epithelium of hindgut | 2.19e-09 | 11 |
urogenital sinus epithelium | 2.19e-09 | 11 |
prostate bud | 2.19e-09 | 11 |
prostate field | 2.19e-09 | 11 |
male organism | 2.45e-08 | 22 |
male reproductive system | 2.45e-08 | 22 |
intestine | 8.15e-08 | 17 |
reproductive structure | 1.16e-07 | 59 |
reproductive system | 1.16e-07 | 59 |
renal system | 7.07e-07 | 48 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.