FFCP PHASE1:Hg19::chr2:158114390..158114399,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11227|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4127|TSSclassifier=S|UniProt=A5PKZ1,Q7Z7M9|association_with_transcript=50bp_to_NM_014568,uc002tzg.2,uc010zci.1_5end|coexpression_cluster_id=C2663|description=CAGE_peak_10_at_GALNT5_5end|id=chr2:158114390..158114399,+|ontology_enrichment_celltype=CL:0000057!1.26e-13!75;CL:0000055!7.33e-13!180;CL:0002620!1.30e-09!23|ontology_enrichment_celltype_v019=CL:0002620;1.13e-18;23!CL:0000764;2.43e-11;2!CL:0000558;2.43e-11;2!CL:0002595;6.98e-09;5!CL:0002556;1.79e-07;6|ontology_enrichment_celltype_v019_2=CL:0002620,5.21e-19,23;CL:0000057,2.46e-12,76;CL:0000764,2.45e-11,2;CL:0000765,2.45e-11,2;CL:0000050,2.45e-11,2;CL:0000038,2.45e-11,2;CL:0000558,2.45e-11,2;CL:0000547,2.45e-11,2;CL:0000549,2.45e-11,2;CL:0000550,2.45e-11,2;CL:0000552,2.45e-11,2;CL:0002595,1.00e-08,5;CL:0002556,2.10e-07,6|ontology_enrichment_development_v019=UBERON:0006215;7.39e-15;3|ontology_enrichment_disease=DOID:17!3.69e-07!5;DOID:450!3.69e-07!5;DOID:66!3.69e-07!5;DOID:423!3.69e-07!5;DOID:0080000!3.69e-07!5;DOID:11722!3.69e-07!5|ontology_enrichment_disease_v019=DOID:1036;2.89e-15;8!DOID:17;5.20e-15;5!DOID:450;5.20e-15;5!DOID:66;5.20e-15;5!DOID:423;5.20e-15;5!DOID:0080000;5.20e-15;5!DOID:11722;5.20e-15;5|ontology_enrichment_disease_v019_2=DOID:17,1.37e-15,5;DOID:450,1.37e-15,5;DOID:66,1.37e-15,5;DOID:423,1.37e-15,5;DOID:0080000,1.37e-15,5;DOID:11722,1.37e-15,5;DOID:1036,3.14e-15,8|ontology_enrichment_uberon=UBERON:0003102!1.20e-09!95|ontology_enrichment_uberon_v019=UBERON:0002097;3.19e-11;41!UBERON:0003834;6.98e-09;5!UBERON:0001533;6.98e-09;5!UBERON:0002199;1.49e-08;46!UBERON:0002416;1.49e-08;46!UBERON:0002037;1.17e-07;6!UBERON:0001758;1.79e-07;6!UBERON:0003672;1.79e-07;6!UBERON:0011137;7.10e-07;11!UBERON:0010323;7.10e-07;11!UBERON:0003102;8.50e-07;50|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.71e-14,41;UBERON:0002199,1.81e-12,46;UBERON:0002416,1.81e-12,46;UBERON:0003102,7.57e-10,99;UBERON:0003834,1.00e-08,5;UBERON:0001533,1.00e-08,5;UBERON:0002037,1.16e-07,6;UBERON:0006215,1.16e-07,6;UBERON:0001758,2.10e-07,6;UBERON:0003672,2.10e-07,6|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.618831764800233,0.662794751455832,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.973269740605272,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.506522046658319,5.03154887090231,1.43418310374407,0,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.122834317311768,0.413303124703062,0,1.23633464639278,0,0,0,0.125118519871964,0.277064115484183,1.75591048352335,1.22595118319608,1.05166641234618,0,1.61450672119976,1.49490172172997,0.635795703478686,1.80054657650641,1.75189299705346,2.31876486041066,1.8611685633159,3.20675031258406,0.876933046450788,1.51460264546469,1.10459878370759,0.969876340912871,2.13005755509969,0.705264687593482,0.169560592310488,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,1.00789276919316,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.892144943985809,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.434418072340414,0,0,0,0,0,0,0,0,0.496215615637554,0.61384789315225,0.561320188866147,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.410635780069046,0,0.232420756919918,0,0,0.276242966807689,0.34444334449382,0.546273504020151,0.524497659837696,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,8.11261543589958,6.01301537357271,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0,0,3.1481234683064,0,0.308033580176089,0,0.869932992075073,0.74129687641568,0.429374660225974,0,1.2655176988749,0.762520775695299,0,0,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0.974853958525138,1.05650146756755,0,0.707027159768564,0,0,1.32687795048244,1.31535265576129,0,0,0.202910376962704,0,0,0.286822704408103,0,0.7133421029625,0,1.05553817648832,0,0,0,0.192444225451024,0.670302275535787,0,0,0,0,0,0.229723400206959,0.507447609232169,0,1.13929437434833,0.476463550915578,0.822724546172388,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0.980160863924127,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4127 | |||
|TSSclassifier=S | |||
|UniProt=A5PKZ1,Q7Z7M9 | |||
|association_with_transcript=50bp_to_NM_014568,uc002tzg.2,uc010zci.1_5end | |||
|coexpression_cluster_id=C2663 | |||
|description=CAGE_peak_10_at_GALNT5_5end | |||
|id=chr2:158114390..158114399,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.26e-13!75;CL:0000055!7.33e-13!180;CL:0002620!1.30e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.13e-18;23!CL:0000764;2.43e-11;2!CL:0000558;2.43e-11;2!CL:0002595;6.98e-09;5!CL:0002556;1.79e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.21e-19,23;CL:0000057,2.46e-12,76;CL:0000764,2.45e-11,2;CL:0000765,2.45e-11,2;CL:0000050,2.45e-11,2;CL:0000038,2.45e-11,2;CL:0000558,2.45e-11,2;CL:0000547,2.45e-11,2;CL:0000549,2.45e-11,2;CL:0000550,2.45e-11,2;CL:0000552,2.45e-11,2;CL:0002595,1.00e-08,5;CL:0002556,2.10e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.39e-15;3 | |||
|ontology_enrichment_disease=DOID:17!3.69e-07!5;DOID:450!3.69e-07!5;DOID:66!3.69e-07!5;DOID:423!3.69e-07!5;DOID:0080000!3.69e-07!5;DOID:11722!3.69e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.89e-15;8!DOID:17;5.20e-15;5!DOID:450;5.20e-15;5!DOID:66;5.20e-15;5!DOID:423;5.20e-15;5!DOID:0080000;5.20e-15;5!DOID:11722;5.20e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.37e-15,5;DOID:450,1.37e-15,5;DOID:66,1.37e-15,5;DOID:423,1.37e-15,5;DOID:0080000,1.37e-15,5;DOID:11722,1.37e-15,5;DOID:1036,3.14e-15,8 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.20e-09!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.19e-11;41!UBERON:0003834;6.98e-09;5!UBERON:0001533;6.98e-09;5!UBERON:0002199;1.49e-08;46!UBERON:0002416;1.49e-08;46!UBERON:0002037;1.17e-07;6!UBERON:0001758;1.79e-07;6!UBERON:0003672;1.79e-07;6!UBERON:0011137;7.10e-07;11!UBERON:0010323;7.10e-07;11!UBERON:0003102;8.50e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.71e-14,41;UBERON:0002199,1.81e-12,46;UBERON:0002416,1.81e-12,46;UBERON:0003102,7.57e-10,99;UBERON:0003834,1.00e-08,5;UBERON:0001533,1.00e-08,5;UBERON:0002037,1.16e-07,6;UBERON:0006215,1.16e-07,6;UBERON:0001758,2.10e-07,6;UBERON:0003672,2.10e-07,6 | |||
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|short_description=p10@GALNT5 | |||
}} |
Revision as of 14:13, 12 September 2013
Short description: | p10@GALNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_GALNT5_5end |
Coexpression cluster: | C2663_Fibroblast_Reticulocytes_Smooth_chronic_basal_cerebellum_liposarcoma |
Association with transcript: | 50bp_to_NM_014568, uc002tzg.2, uc010zci.1_5end |
EntrezGene: | GALNT5 |
HGNC: | 4127 |
UniProt: | A5PKZ1Q7Z7M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.21e-19 | 23 |
fibroblast | 2.46e-12 | 76 |
erythroid lineage cell | 2.45e-11 | 2 |
erythroblast | 2.45e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 2.45e-11 | 2 |
erythroid progenitor cell | 2.45e-11 | 2 |
reticulocyte | 2.45e-11 | 2 |
proerythroblast | 2.45e-11 | 2 |
basophilic erythroblast | 2.45e-11 | 2 |
polychromatophilic erythroblast | 2.45e-11 | 2 |
orthochromatic erythroblast | 2.45e-11 | 2 |
smooth muscle cell of the subclavian artery | 1.00e-08 | 5 |
fibroblast of periodontium | 2.10e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.71e-14 | 41 |
integument | 1.81e-12 | 46 |
integumental system | 1.81e-12 | 46 |
surface structure | 7.57e-10 | 99 |
thoracic segment blood vessel | 1.00e-08 | 5 |
subclavian artery | 1.00e-08 | 5 |
cerebellum | 1.16e-07 | 6 |
rhombic lip | 1.16e-07 | 6 |
periodontium | 2.10e-07 | 6 |
dentition | 2.10e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.37e-15 | 5 |
myotonic disease | 1.37e-15 | 5 |
muscle tissue disease | 1.37e-15 | 5 |
myopathy | 1.37e-15 | 5 |
muscular disease | 1.37e-15 | 5 |
myotonic dystrophy | 1.37e-15 | 5 |
chronic leukemia | 3.14e-15 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.