FFCP PHASE1:Hg19::chr2:216230308..216230359,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=39bp_to_ENST00000494446_5end | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_50_at_FN1_5end | |||
|id=chr2:216230308..216230359,- | |||
|ontology_enrichment_celltype=CL:0000055!4.91e-31!180;CL:0000057!3.03e-21!75;CL:0000680!7.62e-18!57;CL:0000056!7.62e-18!57;CL:0000355!7.62e-18!57;CL:0000183!1.13e-16!59;CL:0000187!1.82e-16!54;CL:0000393!8.41e-13!60;CL:0000211!8.41e-13!60;CL:0002371!4.13e-12!591;CL:0000192!8.22e-12!42;CL:0000514!8.22e-12!42;CL:0000359!1.53e-11!32;CL:0000048!1.08e-09!430;CL:0000144!1.36e-09!625;CL:0000723!2.54e-09!436;CL:0002494!3.07e-09!16;CL:0002620!1.34e-08!23;CL:0000034!1.55e-08!444;CL:0000222!6.94e-08!119;CL:0000220!1.94e-07!246;CL:0002321!2.68e-07!248;CL:0002334!5.02e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002494;3.43e-12;16!CL:0000134;6.82e-12;55!CL:0000723;2.12e-11;61!CL:0000048;3.40e-10;58!CL:0000057;8.65e-10;73!CL:0000359;1.06e-09;32!CL:0002620;5.16e-09;23!CL:0000187;6.54e-09;55!CL:0002334;2.73e-08;12!CL:0000349;4.95e-08;19!CL:0002320;1.14e-07;188!CL:0000034;1.24e-07;69!CL:0000393;2.18e-07;61!CL:0000211;2.18e-07;61!CL:0000192;4.49e-07;43!CL:0002570;4.94e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.91e-22,76;CL:0000048,7.73e-18,427;CL:0000723,2.43e-17,433;CL:0000680,5.87e-17,58;CL:0000056,5.87e-17,58;CL:0000355,5.87e-17,58;CL:0000034,3.65e-16,441;CL:0000187,3.02e-15,55;CL:0000393,1.73e-12,61;CL:0000211,1.73e-12,61;CL:0002494,4.48e-12,16;CL:0000359,6.71e-10,32;CL:0000192,1.52e-09,43;CL:0000514,1.52e-09,43;CL:0002620,5.51e-09,23;CL:0002320,2.94e-08,361;CL:0000349,4.69e-08,19;CL:0002334,5.57e-08,12;CL:0000134,2.55e-07,354;CL:0002570,4.45e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000355;5.60e-09;58!CL:0000514;4.49e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.63e-19!83;UBERON:0002329!5.63e-19!83;UBERON:0003077!5.63e-19!83;UBERON:0003059!5.63e-19!83;UBERON:0007282!5.63e-19!83;UBERON:0009618!5.63e-19!83;UBERON:0007285!5.63e-19!83;UBERON:0005256!3.96e-18!143;UBERON:0004290!1.80e-17!70;UBERON:0002385!6.99e-16!63;UBERON:0001015!6.99e-16!63;UBERON:0000383!6.99e-16!63;UBERON:0001134!9.03e-16!61;UBERON:0002036!9.03e-16!61;UBERON:0003082!9.03e-16!61;UBERON:0000486!9.45e-16!82;UBERON:0003914!6.67e-14!118;UBERON:0000490!1.63e-13!138;UBERON:0002100!9.74e-13!216;UBERON:0004872!3.09e-12!84;UBERON:0001637!8.99e-12!42;UBERON:0003509!8.99e-12!42;UBERON:0004572!8.99e-12!42;UBERON:0002049!1.31e-11!79;UBERON:0007798!1.31e-11!79;UBERON:0001009!2.57e-10!113;UBERON:0004535!4.99e-10!110;UBERON:0004573!6.40e-10!33;UBERON:0004571!6.40e-10!33;UBERON:0000055!3.39e-09!69;UBERON:0001981!4.69e-09!60;UBERON:0007500!4.69e-09!60;UBERON:0004537!4.69e-09!60;UBERON:0006965!4.69e-09!60;UBERON:0003104!7.05e-08!238;UBERON:0009142!7.05e-08!238;UBERON:0007100!1.47e-07!27;UBERON:0000948!2.00e-07!24;UBERON:0005498!2.00e-07!24;UBERON:0004140!2.00e-07!24;UBERON:0009881!2.00e-07!24;UBERON:0004141!2.00e-07!24;UBERON:0003084!2.00e-07!24;UBERON:0007005!2.00e-07!24;UBERON:0004139!2.00e-07!24;UBERON:0004291!2.00e-07!24;UBERON:0002199!2.81e-07!45;UBERON:0002416!2.81e-07!45;UBERON:0000478!3.35e-07!24;UBERON:0005631!3.49e-07!14;UBERON:0000158!3.49e-07!14;UBERON:0000475!3.51e-07!365;UBERON:0003102!4.09e-07!95;UBERON:0000468!5.35e-07!659;UBERON:0002097!8.74e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.32e-08;22!UBERON:0004573;4.36e-08;33!UBERON:0004571;4.36e-08;33!UBERON:0000478;2.34e-07;24!UBERON:0001637;2.62e-07;42!UBERON:0003509;2.62e-07;42!UBERON:0004572;2.62e-07;42!UBERON:0005631;2.72e-07;10!UBERON:0000158;2.72e-07;10!UBERON:0002384;5.09e-07;198!UBERON:0007100;5.79e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.21e-16,73;UBERON:0002329,3.73e-16,71;UBERON:0003059,3.73e-16,71;UBERON:0007282,3.73e-16,71;UBERON:0004290,3.73e-16,71;UBERON:0009618,3.73e-16,71;UBERON:0003077,1.03e-15,72;UBERON:0007285,1.03e-15,72;UBERON:0007503,1.27e-15,78;UBERON:0001134,5.97e-15,62;UBERON:0002036,5.97e-15,62;UBERON:0003082,5.97e-15,62;UBERON:0002385,8.33e-15,64;UBERON:0001015,8.33e-15,64;UBERON:0000383,8.33e-15,64;UBERON:0000486,4.19e-13,83;UBERON:0005256,1.18e-12,122;UBERON:0003104,1.73e-10,160;UBERON:0009142,1.73e-10,160;UBERON:0000948,9.07e-10,24;UBERON:0005498,9.07e-10,24;UBERON:0004140,9.07e-10,24;UBERON:0009881,9.07e-10,24;UBERON:0004141,9.07e-10,24;UBERON:0003084,9.07e-10,24;UBERON:0007005,9.07e-10,24;UBERON:0004139,9.07e-10,24;UBERON:0004291,9.07e-10,24;UBERON:0004872,1.17e-09,83;UBERON:0001637,1.52e-09,42;UBERON:0003509,1.52e-09,42;UBERON:0004572,1.52e-09,42;UBERON:0002384,4.80e-09,371;UBERON:0003914,6.85e-09,117;UBERON:0004573,8.72e-09,33;UBERON:0004571,8.72e-09,33;UBERON:0000926,3.17e-08,315;UBERON:0004120,3.17e-08,315;UBERON:0006603,3.17e-08,315;UBERON:0007100,4.99e-08,27;UBERON:0000490,5.40e-08,148;UBERON:0004535,1.01e-07,109;UBERON:0002100,2.05e-07,199;UBERON:0000478,2.48e-07,24;UBERON:0001009,3.63e-07,112;UBERON:0002199,4.57e-07,46;UBERON:0002416,4.57e-07,46;UBERON:0005631,6.85e-07,14;UBERON:0000158,6.85e-07,14 | |||
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| |||
|short_description=p50@FN1 | |||
}} |
Revision as of 16:32, 12 September 2013
Short description: | p50@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_50_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 39bp_to_ENST00000494446_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.91e-22 | 76 |
multi fate stem cell | 7.73e-18 | 427 |
somatic stem cell | 2.43e-17 | 433 |
muscle precursor cell | 5.87e-17 | 58 |
myoblast | 5.87e-17 | 58 |
multi-potent skeletal muscle stem cell | 5.87e-17 | 58 |
stem cell | 3.65e-16 | 441 |
muscle cell | 3.02e-15 | 55 |
electrically responsive cell | 1.73e-12 | 61 |
electrically active cell | 1.73e-12 | 61 |
cardiocyte | 4.48e-12 | 16 |
vascular associated smooth muscle cell | 6.71e-10 | 32 |
smooth muscle cell | 1.52e-09 | 43 |
smooth muscle myoblast | 1.52e-09 | 43 |
skin fibroblast | 5.51e-09 | 23 |
connective tissue cell | 2.94e-08 | 361 |
extraembryonic cell | 4.69e-08 | 19 |
preadipocyte | 5.57e-08 | 12 |
mesenchymal cell | 2.55e-07 | 354 |
mesenchymal stem cell of adipose | 4.45e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.