FFCP PHASE1:Hg19::chr2:234160374..234160386,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55054|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21498|TSSclassifier=S|UniProt=E7EVC7|association_with_transcript=14bp_to_ENST00000392018_5end|description=CAGE_peak_3_at_ATG16L1_5end|id=chr2:234160374..234160386,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000624;1.69e-10;6!CL:0000791;1.86e-07;18!CL:0000789;1.86e-07;18!CL:0002419;1.86e-07;18|ontology_enrichment_celltype_v019_2=CL:0000624,1.02e-10,6;CL:0000791,1.11e-07,18;CL:0000789,1.11e-07,18;CL:0002420,1.11e-07,18;CL:0002419,1.11e-07,18;CL:0000790,1.11e-07,18|ontology_enrichment_development_v019=CL:0000790;1.86e-07;18|ontology_enrichment_disease=DOID:162!4.38e-13!235;DOID:0050687!4.56e-13!143;DOID:14566!5.70e-13!239;DOID:305!1.55e-11!106|ontology_enrichment_disease_v019=DOID:171;1.38e-08;10|ontology_enrichment_disease_v019_2=DOID:171,9.28e-09,10;DOID:0050687,3.11e-08,143|ontology_enrichment_uberon=UBERON:0001737!6.92e-07!9|ontology_enrichment_uberon_v019=UBERON:0001737;1.25e-11;9!UBERON:0001557;1.25e-11;9|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.57e-12,9|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,1.52908960491121,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0.157421562627358,0.786728553697808,1.53531759238885,0.154816123316076,0,0.30120591877825,0,0.387336002901508,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,0,0.512321413058201,0.236482229888585,0,0,1.35426486594342,0,0.545812300115692,0.674170453335254,0,0,0,0,0,1.27867425159808,0,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0,0.368277635987565,0,0,0,0.419317291016752,0,0.450530678524519,0.32145117339416,0,0,0,0,0,0,0,0,0.574752439954483,0,0,2.27685187643779,1.17447437874188,0.764546456250458,0,2.24203425192614,0,1.96709770113833,2.75107533924415,2.46721798799411,0.167186495390678,2.60737813306872,0,1.94826728407911,2.89667187901451,2.06224135232386,1.10766947291811,0.812411591295047,0.384273959177026,2.34106825607781,3.28875809207352,1.65810010671509,3.18783394308558,0.889719378972363,1.33770414044857,1.04535523804977,3.05935225283429,0,0.68725489096526,2.53019692019503,0.318565414324097,0,0,0,0,0,0,0,1.41124720257313,2.40696176205157,1.88271725047639,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.261958150995425,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0.22452937262617,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.404132016209064,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.600182192168805,0,0,0.18611685633159,0.337552664482532,0,0.252433774244115,0,0,0.355009592516614,0,0.169560592310488,0.57978255948989,0.272746120590835,0,0.121973706129595,0.132529768321485,0.348581828608555,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0,0,1.18306800039844,1.85443159085912,1.20505514941741,1.54411561825352,1.96091499683166,0.949082476444386,1.34831308160164,0.98110732562673,2.30848294167834,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0.329250856225877,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0.380508304469197,2.37061319387782,0.858486162094873,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,1.74306691720059,0,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,1.97030760201927,0.646882724578552,0.77005821767849,0.508189248444927,1.30139853857622,1.54657762555539,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0.620304078368662,0.862856803274467,0.960548020230999,0,0,0.604780586659361,0.248107807818777,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0.164254312027618,0,0.116210378459959,0.362578348774867,0.601519410909855,0,0.459257792658427,0.182091168006717,0.262248829918848,0,0.308061348417659,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,1.01950509218015,0,0.447749509444357,0,0.261435451024901,0,0,0,0,1.19040304263846,1.40266149865,0.574265537996172,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0.0852266274161009,0.267096106940212,0,0.192190067365106,0.638063562472921,0.2023155617111,0,0,0,0.616067160352178,0,0.869932992075073,0,0,0,0,0,0,0,0.636406495851874,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0.21110763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rt_description=p3@ATG16L1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55054 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21498 | |||
|TSSclassifier=S | |||
|UniProt=E7EVC7 | |||
|association_with_transcript=14bp_to_ENST00000392018_5end | |||
|description=CAGE_peak_3_at_ATG16L1_5end | |||
|id=chr2:234160374..234160386,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.69e-10;6!CL:0000791;1.86e-07;18!CL:0000789;1.86e-07;18!CL:0002419;1.86e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.02e-10,6;CL:0000791,1.11e-07,18;CL:0000789,1.11e-07,18;CL:0002420,1.11e-07,18;CL:0002419,1.11e-07,18;CL:0000790,1.11e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.86e-07;18 | |||
|ontology_enrichment_disease=DOID:162!4.38e-13!235;DOID:0050687!4.56e-13!143;DOID:14566!5.70e-13!239;DOID:305!1.55e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:171;1.38e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,9.28e-09,10;DOID:0050687,3.11e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.92e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.25e-11;9!UBERON:0001557;1.25e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.57e-12,9 | |||
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| |||
|short_description=p3@ATG16L1 | |||
}} |
Revision as of 17:28, 12 September 2013
Short description: | p3@ATG16L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ATG16L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000392018_5end |
EntrezGene: | ATG16L1 |
HGNC: | 21498 |
UniProt: | E7EVC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.02e-10 | 6 |
mature alpha-beta T cell | 1.11e-07 | 18 |
alpha-beta T cell | 1.11e-07 | 18 |
immature T cell | 1.11e-07 | 18 |
mature T cell | 1.11e-07 | 18 |
immature alpha-beta T cell | 1.11e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.57e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.28e-09 | 10 |
cell type cancer | 3.11e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.