FFCP PHASE1:Mm9::chr10:82789460..82789502,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:82789460..82789502,-|id=chr10:82789460..82789502,-|ontology_enrichment_celltype=CL:0000181!7.66e-17!5;CL:0000417!7.66e-17!5;CL:0000668!7.66e-17!5;CL:0000412!7.66e-17!5;CL:0000182!7.66e-17!5;CL:0000414!9.69e-08!11|ontology_enrichment_celltype_v019_2=CL:0000182,9.03e-20,5;CL:0000057,1.38e-07,1;CL:0000632,1.38e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!8.57e-23!25;UBERON:0002330!8.57e-23!25;UBERON:0002107!1.57e-21!22;UBERON:0007499!1.57e-21!22;UBERON:0006925!1.57e-21!22;UBERON:0009497!1.57e-21!22;UBERON:0000015!1.57e-21!22;UBERON:0002423!1.57e-21!22;UBERON:0006235!1.57e-21!22;UBERON:0008835!1.57e-21!22;UBERON:0003894!1.57e-21!22;UBERON:0004161!1.57e-21!22;UBERON:0008836!1.57e-21!22;UBERON:0009854!1.55e-20!23;UBERON:0009856!1.55e-20!23;UBERON:0003914!2.49e-09!47;UBERON:0005256!2.49e-09!47;UBERON:0005172!6.86e-09!49;UBERON:0005173!6.86e-09!49;UBERON:0002417!6.86e-09!49;UBERON:0000916!6.86e-09!49;UBERON:0005057!1.75e-08!51;UBERON:0002530!9.02e-08!65;UBERON:0003929!9.23e-08!55;UBERON:0000466!2.53e-07!79;UBERON:0001041!2.76e-07!92;UBERON:0002368!5.42e-07!60;UBERON:0000077!8.38e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.02e-22,25;UBERON:0002330,1.02e-22,25;UBERON:0002107,4.82e-21,22;UBERON:0007499,4.82e-21,22;UBERON:0006925,4.82e-21,22;UBERON:0009497,4.82e-21,22;UBERON:0000015,4.82e-21,22;UBERON:0002423,4.82e-21,22;UBERON:0006235,4.82e-21,22;UBERON:0008835,4.82e-21,22;UBERON:0003894,4.82e-21,22;UBERON:0004161,4.82e-21,22;UBERON:0008836,4.82e-21,22;UBERON:0009854,4.35e-20,23;UBERON:0009856,4.35e-20,23;UBERON:0005256,8.93e-10,45;UBERON:0003914,2.58e-09,47;UBERON:0001041,2.92e-09,80;UBERON:0005172,6.85e-09,49;UBERON:0005173,6.85e-09,49;UBERON:0002417,6.85e-09,49;UBERON:0000916,6.85e-09,49;UBERON:0002530,5.31e-08,65;UBERON:0003929,8.39e-08,55;UBERON:0001044,3.67e-07,1;UBERON:0001736,3.67e-07,1;UBERON:0003293,3.67e-07,1;UBERON:0003294,3.67e-07,1;UBERON:0001829,3.67e-07,1;UBERON:0010047,3.67e-07,1;UBERON:0000167,3.67e-07,1;UBERON:0006298,3.67e-07,1;UBERON:0002368,4.63e-07,60;UBERON:0003104,6.31e-07,61;UBERON:0009142,6.31e-07,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7667820317022,12.2394840067395,15.6513925574967,9.74664626171504,1.79210754838934,2.38755514223978,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57751155007006,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48226313543574,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,1.26289438973556,11.8402292924462,6.75420929908714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0,0,0,0,0,0,1.57053565190418,0,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:82789460..82789502,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:82789460..82789502,- | |||
|id=chr10:82789460..82789502,- | |||
|ontology_enrichment_celltype=CL:0000181!7.66e-17!5;CL:0000417!7.66e-17!5;CL:0000668!7.66e-17!5;CL:0000412!7.66e-17!5;CL:0000182!7.66e-17!5;CL:0000414!9.69e-08!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.03e-20,5;CL:0000057,1.38e-07,1;CL:0000632,1.38e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!8.57e-23!25;UBERON:0002330!8.57e-23!25;UBERON:0002107!1.57e-21!22;UBERON:0007499!1.57e-21!22;UBERON:0006925!1.57e-21!22;UBERON:0009497!1.57e-21!22;UBERON:0000015!1.57e-21!22;UBERON:0002423!1.57e-21!22;UBERON:0006235!1.57e-21!22;UBERON:0008835!1.57e-21!22;UBERON:0003894!1.57e-21!22;UBERON:0004161!1.57e-21!22;UBERON:0008836!1.57e-21!22;UBERON:0009854!1.55e-20!23;UBERON:0009856!1.55e-20!23;UBERON:0003914!2.49e-09!47;UBERON:0005256!2.49e-09!47;UBERON:0005172!6.86e-09!49;UBERON:0005173!6.86e-09!49;UBERON:0002417!6.86e-09!49;UBERON:0000916!6.86e-09!49;UBERON:0005057!1.75e-08!51;UBERON:0002530!9.02e-08!65;UBERON:0003929!9.23e-08!55;UBERON:0000466!2.53e-07!79;UBERON:0001041!2.76e-07!92;UBERON:0002368!5.42e-07!60;UBERON:0000077!8.38e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.02e-22,25;UBERON:0002330,1.02e-22,25;UBERON:0002107,4.82e-21,22;UBERON:0007499,4.82e-21,22;UBERON:0006925,4.82e-21,22;UBERON:0009497,4.82e-21,22;UBERON:0000015,4.82e-21,22;UBERON:0002423,4.82e-21,22;UBERON:0006235,4.82e-21,22;UBERON:0008835,4.82e-21,22;UBERON:0003894,4.82e-21,22;UBERON:0004161,4.82e-21,22;UBERON:0008836,4.82e-21,22;UBERON:0009854,4.35e-20,23;UBERON:0009856,4.35e-20,23;UBERON:0005256,8.93e-10,45;UBERON:0003914,2.58e-09,47;UBERON:0001041,2.92e-09,80;UBERON:0005172,6.85e-09,49;UBERON:0005173,6.85e-09,49;UBERON:0002417,6.85e-09,49;UBERON:0000916,6.85e-09,49;UBERON:0002530,5.31e-08,65;UBERON:0003929,8.39e-08,55;UBERON:0001044,3.67e-07,1;UBERON:0001736,3.67e-07,1;UBERON:0003293,3.67e-07,1;UBERON:0003294,3.67e-07,1;UBERON:0001829,3.67e-07,1;UBERON:0010047,3.67e-07,1;UBERON:0000167,3.67e-07,1;UBERON:0006298,3.67e-07,1;UBERON:0002368,4.63e-07,60;UBERON:0003104,6.31e-07,61;UBERON:0009142,6.31e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7667820317022,12.2394840067395,15.6513925574967,9.74664626171504,1.79210754838934,2.38755514223978,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57751155007006,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48226313543574,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,1.26289438973556,11.8402292924462,6.75420929908714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0,0,0,0,0,0,1.57053565190418,0,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:82789460..82789502,- | |||
}} |
Revision as of 17:46, 12 September 2013
Short description: | p@chr10:82789460..82789502, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:82789460..82789502, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.03e-20 | 5 |
fibroblast | 1.38e-07 | 1 |
hepatic stellate cell | 1.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.02e-22 | 25 |
exocrine system | 1.02e-22 | 25 |
liver | 4.82e-21 | 22 |
epithelial sac | 4.82e-21 | 22 |
digestive gland | 4.82e-21 | 22 |
epithelium of foregut-midgut junction | 4.82e-21 | 22 |
anatomical boundary | 4.82e-21 | 22 |
hepatobiliary system | 4.82e-21 | 22 |
foregut-midgut junction | 4.82e-21 | 22 |
hepatic diverticulum | 4.82e-21 | 22 |
liver primordium | 4.82e-21 | 22 |
septum transversum | 4.82e-21 | 22 |
liver bud | 4.82e-21 | 22 |
digestive tract diverticulum | 4.35e-20 | 23 |
sac | 4.35e-20 | 23 |
trunk mesenchyme | 8.93e-10 | 45 |
epithelial tube | 2.58e-09 | 47 |
foregut | 2.92e-09 | 80 |
abdomen element | 6.85e-09 | 49 |
abdominal segment element | 6.85e-09 | 49 |
abdominal segment of trunk | 6.85e-09 | 49 |
abdomen | 6.85e-09 | 49 |
gland | 5.31e-08 | 65 |
gut epithelium | 8.39e-08 | 55 |
saliva-secreting gland | 3.67e-07 | 1 |
submandibular gland | 3.67e-07 | 1 |
gland of oral region | 3.67e-07 | 1 |
gland of foregut | 3.67e-07 | 1 |
major salivary gland | 3.67e-07 | 1 |
oral gland | 3.67e-07 | 1 |
oral cavity | 3.67e-07 | 1 |
submandibular gland primordium | 3.67e-07 | 1 |
endocrine gland | 4.63e-07 | 60 |
mesenchyme | 6.31e-07 | 61 |
entire embryonic mesenchyme | 6.31e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.