Personal tools

FFCP PHASE1:Mm9::chr10:86984638..86984662,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=18478|HGNC=|MCL_coexpression_id=8|UniProt=D3YZ73|association_with_transcript=-12bp_to_ENSMUST00000142088_5end|description=CAGE_peak_3_at_Pah_5end|id=chr10:86984638..86984662,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,4.52e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.98e-22!49;UBERON:0005173!1.98e-22!49;UBERON:0002417!1.98e-22!49;UBERON:0000916!1.98e-22!49;UBERON:0009854!9.48e-20!23;UBERON:0009856!9.48e-20!23;UBERON:0002107!1.70e-19!22;UBERON:0007499!1.70e-19!22;UBERON:0006925!1.70e-19!22;UBERON:0009497!1.70e-19!22;UBERON:0000015!1.70e-19!22;UBERON:0002423!1.70e-19!22;UBERON:0006235!1.70e-19!22;UBERON:0008835!1.70e-19!22;UBERON:0003894!1.70e-19!22;UBERON:0004161!1.70e-19!22;UBERON:0008836!1.70e-19!22;UBERON:0005177!1.05e-17!85;UBERON:0002365!6.52e-16!25;UBERON:0002330!6.52e-16!25;UBERON:0009569!2.53e-14!66;UBERON:0002100!1.27e-12!98;UBERON:0000949!7.07e-11!72;UBERON:0005256!8.90e-10!47;UBERON:0003104!5.56e-09!131;UBERON:0009142!5.56e-09!131;UBERON:0000466!4.25e-08!79;UBERON:0001045!1.62e-07!13;UBERON:0001041!2.36e-07!92;UBERON:0001264!3.35e-07!12;UBERON:0003922!3.35e-07!12;UBERON:0002114!3.35e-07!12;UBERON:0003923!3.35e-07!12;UBERON:0003924!3.35e-07!12;UBERON:0003921!3.35e-07!12;UBERON:0004921!8.38e-07!126;UBERON:0004185!8.38e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.71e-24,23;UBERON:0009856,3.71e-24,23;UBERON:0002107,7.68e-24,22;UBERON:0007499,7.68e-24,22;UBERON:0006925,7.68e-24,22;UBERON:0009497,7.68e-24,22;UBERON:0000015,7.68e-24,22;UBERON:0002423,7.68e-24,22;UBERON:0006235,7.68e-24,22;UBERON:0008835,7.68e-24,22;UBERON:0003894,7.68e-24,22;UBERON:0004161,7.68e-24,22;UBERON:0008836,7.68e-24,22;UBERON:0005172,2.05e-22,49;UBERON:0005173,2.05e-22,49;UBERON:0002417,2.05e-22,49;UBERON:0000916,2.05e-22,49;UBERON:0002365,6.28e-20,25;UBERON:0002330,6.28e-20,25;UBERON:0005177,3.30e-19,79;UBERON:0003104,1.83e-15,61;UBERON:0009142,1.83e-15,61;UBERON:0002100,5.97e-15,90;UBERON:0009569,2.34e-13,66;UBERON:0005256,2.38e-12,45;UBERON:0000949,3.53e-12,72;UBERON:0001264,1.48e-07,12;UBERON:0002368,4.37e-07,60;UBERON:0003914,5.75e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.7738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.7708372347849,199.618339459682,141.434037411212,365.379060738802,317.090891714463,364.245859210134,99.7155382935438,0,0,0,0,0,0,0,0,0,0,157.802121771741,0,1.03909497345377,2.4287945747259,2.13125834818499,1.61430848079241,0.452167921657868,2.58695155698551,2.13633205260448,0,0.144599356919912,0,0,0,0,1.86391761218122,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,1.65775299619287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,4.62586296177317,0,0,0.232236671860439,0.644337306610467,0.403367049246685,0,0.760902504450237,1.42358718463353,0,0.502670417600539,0.397912944082302,0.38992817423824,1.79763881730844,0,1.59313018603494,0.569003702859245,1.5994791765362,2.25415471346161,8.5533557695032,22.1105835371093,16.5520534941152,76.7691560688483,185.841176306319,217.129240604621,219.646951780805,275.108037936874,4.83850806576673,13.3660116676978,12.5922782935518,15.6202293469147,29.6647906495473,29.7912246584261,50.3468240538919,114.143199649625,89.7815821125026,116.452247287157,105.315888190186,137.920651516636,163.165955153834,257.435288403944,297.185209159834,0,0.189491411770485,0.162964976442026,0,0,0,0.714130922658041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0,1.06839362200353,0.162886959353576,0,79.6470830039777,2.18502572539483,1.51161778482376,1.88605079755898,0.295301892880773,2.76691633149535,1.55056975900933,6.18007340111759,7.48644494607915,43.6130725951426,73.7930260024991,71.1635248412489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0.406638934253697,0.540026704109006,0,0.87345025498471,4.18079473792944,9.4224939526883,0,0,0,0,0,0,0,0,0,0,1.8228613878153,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,1.70733605754134,2.43106717068294,4.61148957781561,4.41224420280034,3.33370091702423,4.12070114477788,3.20919209591815,3.79045817645696,4.05566879824384,3.39527414494937,5.43120743325318,3.90553429669703,3.50356360629241,4.28664322154766,2.89710814862139,2.89363830695558,1.64834360321323,3.09117732282234,6.17164654293748,4.08194354166476,5.7224685587357,3.0522747492789,3.76437521661322,3.9768865709088,3.10977553883713,3.94604567156764,5.02475221229689,2.24456908663095,3.55905054372522,3.74317033027141,4.91077251803627,4.95797891795091,4.62975866354739,0,6.08222181958062,6.87587372954555,0.191288332068843,0.441182838239031,0.695603506861264|short_description=p3@Pah}}
|EntrezGene=18478
|HGNC=
|MCL_coexpression_id=8
|UniProt=D3YZ73
|association_with_transcript=-12bp_to_ENSMUST00000142088_5end
|description=CAGE_peak_3_at_Pah_5end
|id=chr10:86984638..86984662,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,4.52e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!1.98e-22!49;UBERON:0005173!1.98e-22!49;UBERON:0002417!1.98e-22!49;UBERON:0000916!1.98e-22!49;UBERON:0009854!9.48e-20!23;UBERON:0009856!9.48e-20!23;UBERON:0002107!1.70e-19!22;UBERON:0007499!1.70e-19!22;UBERON:0006925!1.70e-19!22;UBERON:0009497!1.70e-19!22;UBERON:0000015!1.70e-19!22;UBERON:0002423!1.70e-19!22;UBERON:0006235!1.70e-19!22;UBERON:0008835!1.70e-19!22;UBERON:0003894!1.70e-19!22;UBERON:0004161!1.70e-19!22;UBERON:0008836!1.70e-19!22;UBERON:0005177!1.05e-17!85;UBERON:0002365!6.52e-16!25;UBERON:0002330!6.52e-16!25;UBERON:0009569!2.53e-14!66;UBERON:0002100!1.27e-12!98;UBERON:0000949!7.07e-11!72;UBERON:0005256!8.90e-10!47;UBERON:0003104!5.56e-09!131;UBERON:0009142!5.56e-09!131;UBERON:0000466!4.25e-08!79;UBERON:0001045!1.62e-07!13;UBERON:0001041!2.36e-07!92;UBERON:0001264!3.35e-07!12;UBERON:0003922!3.35e-07!12;UBERON:0002114!3.35e-07!12;UBERON:0003923!3.35e-07!12;UBERON:0003924!3.35e-07!12;UBERON:0003921!3.35e-07!12;UBERON:0004921!8.38e-07!126;UBERON:0004185!8.38e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.71e-24,23;UBERON:0009856,3.71e-24,23;UBERON:0002107,7.68e-24,22;UBERON:0007499,7.68e-24,22;UBERON:0006925,7.68e-24,22;UBERON:0009497,7.68e-24,22;UBERON:0000015,7.68e-24,22;UBERON:0002423,7.68e-24,22;UBERON:0006235,7.68e-24,22;UBERON:0008835,7.68e-24,22;UBERON:0003894,7.68e-24,22;UBERON:0004161,7.68e-24,22;UBERON:0008836,7.68e-24,22;UBERON:0005172,2.05e-22,49;UBERON:0005173,2.05e-22,49;UBERON:0002417,2.05e-22,49;UBERON:0000916,2.05e-22,49;UBERON:0002365,6.28e-20,25;UBERON:0002330,6.28e-20,25;UBERON:0005177,3.30e-19,79;UBERON:0003104,1.83e-15,61;UBERON:0009142,1.83e-15,61;UBERON:0002100,5.97e-15,90;UBERON:0009569,2.34e-13,66;UBERON:0005256,2.38e-12,45;UBERON:0000949,3.53e-12,72;UBERON:0001264,1.48e-07,12;UBERON:0002368,4.37e-07,60;UBERON:0003914,5.75e-07,47
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.7738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.7708372347849,199.618339459682,141.434037411212,365.379060738802,317.090891714463,364.245859210134,99.7155382935438,0,0,0,0,0,0,0,0,0,0,157.802121771741,0,1.03909497345377,2.4287945747259,2.13125834818499,1.61430848079241,0.452167921657868,2.58695155698551,2.13633205260448,0,0.144599356919912,0,0,0,0,1.86391761218122,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,1.65775299619287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,4.62586296177317,0,0,0.232236671860439,0.644337306610467,0.403367049246685,0,0.760902504450237,1.42358718463353,0,0.502670417600539,0.397912944082302,0.38992817423824,1.79763881730844,0,1.59313018603494,0.569003702859245,1.5994791765362,2.25415471346161,8.5533557695032,22.1105835371093,16.5520534941152,76.7691560688483,185.841176306319,217.129240604621,219.646951780805,275.108037936874,4.83850806576673,13.3660116676978,12.5922782935518,15.6202293469147,29.6647906495473,29.7912246584261,50.3468240538919,114.143199649625,89.7815821125026,116.452247287157,105.315888190186,137.920651516636,163.165955153834,257.435288403944,297.185209159834,0,0.189491411770485,0.162964976442026,0,0,0,0.714130922658041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0,1.06839362200353,0.162886959353576,0,79.6470830039777,2.18502572539483,1.51161778482376,1.88605079755898,0.295301892880773,2.76691633149535,1.55056975900933,6.18007340111759,7.48644494607915,43.6130725951426,73.7930260024991,71.1635248412489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0.406638934253697,0.540026704109006,0,0.87345025498471,4.18079473792944,9.4224939526883,0,0,0,0,0,0,0,0,0,0,1.8228613878153,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,1.70733605754134,2.43106717068294,4.61148957781561,4.41224420280034,3.33370091702423,4.12070114477788,3.20919209591815,3.79045817645696,4.05566879824384,3.39527414494937,5.43120743325318,3.90553429669703,3.50356360629241,4.28664322154766,2.89710814862139,2.89363830695558,1.64834360321323,3.09117732282234,6.17164654293748,4.08194354166476,5.7224685587357,3.0522747492789,3.76437521661322,3.9768865709088,3.10977553883713,3.94604567156764,5.02475221229689,2.24456908663095,3.55905054372522,3.74317033027141,4.91077251803627,4.95797891795091,4.62975866354739,0,6.08222181958062,6.87587372954555,0.191288332068843,0.441182838239031,0.695603506861264
|short_description=p3@Pah
}}

Revision as of 17:52, 12 September 2013

Short description:p3@Pah
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pah_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: -12bp_to_ENSMUST00000142088_5end
EntrezGene:Pah
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pah

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A346.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G383.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7199.62
Mouse hepatocyte, donor1.CNhs13078.11714-123C4141.43
Mouse hepatocyte, donor3.CNhs12615.11637-122C8365.38
Mouse hepatocyte, donor6.CNhs13090.11822-124F4317.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F6364.25
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A799.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6157.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I28.55
kidney, embryo E18.CNhs11001.1288-20C722.11
kidney, neonate N00.CNhs11214.646-21G716.55
kidney, neonate N10.CNhs11206.758-6D576.77
kidney, neonate N20.CNhs11113.832-19I1185.84
kidney, neonate N25.CNhs11122.1353-25F3217.13
kidney, neonate N30.CNhs11203.1385-42H1219.65
liver, adult pregnant day01.CNhs10466.508-5B2275.11
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H613.37
liver, embryo E14.CNhs10594.409-16E112.59
liver, embryo E15.CNhs10520.433-16D715.62
liver, embryo E16.CNhs10523.462-17F529.66
liver, embryo E17.CNhs10510.481-18A329.79
liver, embryo E18.CNhs10579.499-43G450.35
liver, neonate N00.CNhs11117.641-24F4114.14
liver, neonate N03.CNhs11123.1345-25G289.78
liver, neonate N06.CNhs11101.684-20A8116.45
liver, neonate N07.CNhs11103.716-20H2105.32
liver, neonate N10.CNhs11115.751-24B9137.92
liver, neonate N20.CNhs11220.823-25A3163.17
liver, neonate N25.CNhs11198.1368-26H1257.44
liver, neonate N30.CNhs11106.1382-42D1297.19
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E479.65
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B643.61
pancreas, neonate N25.CNhs11094.1555-45E273.79
pancreas, neonate N30.CNhs11182.1548-44H571.16
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A99.42
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C26.88
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte4.52e-075

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum3.71e-2423
sac3.71e-2423
liver7.68e-2422
epithelial sac7.68e-2422
digestive gland7.68e-2422
epithelium of foregut-midgut junction7.68e-2422
anatomical boundary7.68e-2422
hepatobiliary system7.68e-2422
foregut-midgut junction7.68e-2422
hepatic diverticulum7.68e-2422
liver primordium7.68e-2422
septum transversum7.68e-2422
liver bud7.68e-2422
abdomen element2.05e-2249
abdominal segment element2.05e-2249
abdominal segment of trunk2.05e-2249
abdomen2.05e-2249
exocrine gland6.28e-2025
exocrine system6.28e-2025
trunk region element3.30e-1979
mesenchyme1.83e-1561
entire embryonic mesenchyme1.83e-1561
trunk5.97e-1590
subdivision of trunk2.34e-1366
trunk mesenchyme2.38e-1245
endocrine system3.53e-1272
pancreas1.48e-0712
endocrine gland4.37e-0760
epithelial tube5.75e-0747







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:86984638..86984662,%2B&oldid=2882021"