FFCP PHASE1:Mm9::chr11:103265198..103265232,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=38|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:103265198..103265232,-|id=chr11:103265198..103265232,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002194,2.22e-07,4;CL:0000766,2.22e-07,4;CL:0000234,2.22e-07,4;CL:0000576,2.22e-07,4;CL:0000235,2.22e-07,4;CL:0000864,2.22e-07,4;CL:0002009,2.22e-07,4;CL:0000040,2.22e-07,4;CL:0000559,2.22e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!3.22e-09!193;UBERON:0004120!3.22e-09!193;UBERON:0006603!3.22e-09!193;UBERON:0005256!6.54e-07!47;UBERON:0002204!8.82e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0003104,2.05e-09,61;UBERON:0009142,2.05e-09,61;UBERON:0002204,1.52e-08,32;UBERON:0005256,1.23e-07,45;UBERON:0002107,3.08e-07,22;UBERON:0007499,3.08e-07,22;UBERON:0006925,3.08e-07,22;UBERON:0009497,3.08e-07,22;UBERON:0000015,3.08e-07,22;UBERON:0002423,3.08e-07,22;UBERON:0006235,3.08e-07,22;UBERON:0008835,3.08e-07,22;UBERON:0003894,3.08e-07,22;UBERON:0004161,3.08e-07,22;UBERON:0008836,3.08e-07,22;UBERON:0001474,4.48e-07,22;UBERON:0004765,4.48e-07,22;UBERON:0001434,4.48e-07,22;UBERON:0000981,4.74e-07,4;UBERON:0003608,4.74e-07,4;UBERON:0003826,4.74e-07,4;UBERON:0008202,4.74e-07,4;UBERON:0004381,4.74e-07,4;UBERON:0007273,4.74e-07,4;UBERON:0010912,4.74e-07,4;UBERON:0002513,4.74e-07,4;UBERON:0004375,4.74e-07,4;UBERON:0010740,4.74e-07,4;UBERON:0010363,4.74e-07,4;UBERON:0003860,4.74e-07,4;UBERON:0002428,4.74e-07,4;UBERON:0010742,4.74e-07,4;UBERON:0002495,4.74e-07,4;UBERON:0003464,4.74e-07,4;UBERON:0003606,4.74e-07,4;UBERON:0005893,4.74e-07,4;UBERON:0009749,4.74e-07,4;UBERON:0010712,4.74e-07,4;UBERON:0010886,4.74e-07,4;UBERON:0005254,4.74e-07,4;UBERON:0010885,4.74e-07,4;UBERON:0010881,4.74e-07,4;UBERON:0010882,4.74e-07,4;UBERON:0007844,4.74e-07,4;UBERON:0001441,4.74e-07,4;UBERON:0011249,4.74e-07,4;UBERON:0002091,4.74e-07,4;UBERON:0003285,4.74e-07,4;UBERON:0004288,4.74e-07,4;UBERON:0010129,4.74e-07,4;UBERON:0006234,4.74e-07,4;UBERON:0009854,8.63e-07,23;UBERON:0009856,8.63e-07,23|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0.510259740906419,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,1.25559489221072,1.5626706890476,1.57057123192139,2.94115744015507,0,2.91306211818692,0.125896817975577,0.202753862439029,0.734187008646726,0,0,0,0,0.419959264876088,0,0.167782606057736,0,0,0.771778308107841,2.57880095944881,1.03134418455488,0,0,0.633831403506179,1.0165335962074,0,50.3943841677583,71.1983781048222,45.4707273565504,19.4740071836963,6.53171119046643,0.207379224616955,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0,0,0.37863096666592,0.302286240427142,0,2.58127163094416,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0.253359865475099,0,0.45673551887624,2.58937883647172,2.82040064223167,0,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,0.251333182659351,1.97755974187499,1.3013942122792,4.42305275974937,3.23533699894818,3.75430581382669,6.30337829075789,0,0,0,0,0.11981512450592,0,0.254140454146129,0.149790639404823,0,0.125654352112864,0,0,0,0,0.509196819251581,4.72746488318353,1.51633655060205,1.68353484709179,0.390361328888111,0,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0.351902248327898,0.43839146485515,0.278047249225598,1.0447564995665,1.02891068203972,0.398068533636986,0.702213187313235,0,0.284163499395593,0,0,0.180062061461015,0,0.590292695242212,0.462801338662135,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0,1.09775057645525,0.402619256281115,0,0.308713837137853,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.397912944082302,0.58489226135736,0,0,0,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.350679099451593,0.822074982615345,1.77132177575523,2.82597710114475,0.493588655687202,1.48226313543574,1.33476084572875,1.37591296579242,1.79889689907883,2.63718157805054,2.17059443777175,1.2731292589071,1.72617682470486,1.13494658742525,0.823684239564244,1.43768206527355,1.48856379067401,0.624075346229121,2.77836765741823,0.896987067609561,0.482443521363367,0.923765950833023,0.189491411770485,0.325929952884052,0.339490171550376,0,0.335012514883631,0.238043640886014,0,0.315270288212382,0.44292937929755,0.637819074629948,0.491589944147214,0.172684981865896,0.289298117163023,19.6028669121054,33.1782467129413,0,0.275936746304732,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0.445597348164788,0,0,0,0,0.321321316421807,0.567760340833074,0.178065603667255,0.977321756121456,1.81467135269789,0,0.728341908464944,0.302323556964751,0,2.65771703592696,0,0.775284879504663,0,0.356497378384721,0,0,0,0.340439605753788,0.540183282093931,0.905510786479282,0.428674070063185,0,0.356737635204141,0.329098041204242,0,2.3467170806371,1.90648863777438,0,1.15420377059036,0.484393280087717,0.241251699712623,0.716234064018819,0.164140899745061,0,0.370850604021019,2.22132145037209,0.412773735926445,0.370389054739423,0.941842285023455,0.27338845544205,0.686334519619568,0,0,0.138199973804424,0.954670618015114,0.158167996790568,0.813277868507395,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.495920734352016,0,0,0.621339313086926,0,1.49516546043979,0.827292452285488,0.388902376688095,0.129159823477731,0.168956125490778,0.469428954583016,0.13020438484395,0.314578033277133,0.241584120826006,0,0.632022241256357,0.608175645870493,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0.295379054349154,0.100966449948148,0.304827226619999,0.302478555410522,0.487289403698762,0.0962118416403295,0.233753804363138,0.453460767230423,0,0,0,0.772758376128762,6.94425159169373,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.682934423016537,0.729320151204882,0.419226325255965,1.10306105070008,0.222246727801615,1.64828045791115,2.24643446714271,1.26348605881899,0.760437899670719,0.943131706930381,0.561849044819294,1.02440243847791,1.26358031702349,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,1.02860775715625,0.70990322463735,1.43061713968393,1.45346416632329,0.376437521661322,0.761531471025089,0.914639864363863,1.05227884575137,0.271608227691724,1.12228454331548,1.54225523561426,0.591026894253381,0.818462086339379,0.309873682371932,2.12197272079256,1.24905288968973,1.40358965067245,1.28922632428979,2.29545998482612,0.441182838239031,2.08681052058379|short_description=p@chr11:103265198..103265232,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:103265198..103265232,- | |||
|id=chr11:103265198..103265232,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.22e-07,4;CL:0000766,2.22e-07,4;CL:0000234,2.22e-07,4;CL:0000576,2.22e-07,4;CL:0000235,2.22e-07,4;CL:0000864,2.22e-07,4;CL:0002009,2.22e-07,4;CL:0000040,2.22e-07,4;CL:0000559,2.22e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.22e-09!193;UBERON:0004120!3.22e-09!193;UBERON:0006603!3.22e-09!193;UBERON:0005256!6.54e-07!47;UBERON:0002204!8.82e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,2.05e-09,61;UBERON:0009142,2.05e-09,61;UBERON:0002204,1.52e-08,32;UBERON:0005256,1.23e-07,45;UBERON:0002107,3.08e-07,22;UBERON:0007499,3.08e-07,22;UBERON:0006925,3.08e-07,22;UBERON:0009497,3.08e-07,22;UBERON:0000015,3.08e-07,22;UBERON:0002423,3.08e-07,22;UBERON:0006235,3.08e-07,22;UBERON:0008835,3.08e-07,22;UBERON:0003894,3.08e-07,22;UBERON:0004161,3.08e-07,22;UBERON:0008836,3.08e-07,22;UBERON:0001474,4.48e-07,22;UBERON:0004765,4.48e-07,22;UBERON:0001434,4.48e-07,22;UBERON:0000981,4.74e-07,4;UBERON:0003608,4.74e-07,4;UBERON:0003826,4.74e-07,4;UBERON:0008202,4.74e-07,4;UBERON:0004381,4.74e-07,4;UBERON:0007273,4.74e-07,4;UBERON:0010912,4.74e-07,4;UBERON:0002513,4.74e-07,4;UBERON:0004375,4.74e-07,4;UBERON:0010740,4.74e-07,4;UBERON:0010363,4.74e-07,4;UBERON:0003860,4.74e-07,4;UBERON:0002428,4.74e-07,4;UBERON:0010742,4.74e-07,4;UBERON:0002495,4.74e-07,4;UBERON:0003464,4.74e-07,4;UBERON:0003606,4.74e-07,4;UBERON:0005893,4.74e-07,4;UBERON:0009749,4.74e-07,4;UBERON:0010712,4.74e-07,4;UBERON:0010886,4.74e-07,4;UBERON:0005254,4.74e-07,4;UBERON:0010885,4.74e-07,4;UBERON:0010881,4.74e-07,4;UBERON:0010882,4.74e-07,4;UBERON:0007844,4.74e-07,4;UBERON:0001441,4.74e-07,4;UBERON:0011249,4.74e-07,4;UBERON:0002091,4.74e-07,4;UBERON:0003285,4.74e-07,4;UBERON:0004288,4.74e-07,4;UBERON:0010129,4.74e-07,4;UBERON:0006234,4.74e-07,4;UBERON:0009854,8.63e-07,23;UBERON:0009856,8.63e-07,23 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0.510259740906419,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,1.25559489221072,1.5626706890476,1.57057123192139,2.94115744015507,0,2.91306211818692,0.125896817975577,0.202753862439029,0.734187008646726,0,0,0,0,0.419959264876088,0,0.167782606057736,0,0,0.771778308107841,2.57880095944881,1.03134418455488,0,0,0.633831403506179,1.0165335962074,0,50.3943841677583,71.1983781048222,45.4707273565504,19.4740071836963,6.53171119046643,0.207379224616955,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0,0,0.37863096666592,0.302286240427142,0,2.58127163094416,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0.253359865475099,0,0.45673551887624,2.58937883647172,2.82040064223167,0,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,0.251333182659351,1.97755974187499,1.3013942122792,4.42305275974937,3.23533699894818,3.75430581382669,6.30337829075789,0,0,0,0,0.11981512450592,0,0.254140454146129,0.149790639404823,0,0.125654352112864,0,0,0,0,0.509196819251581,4.72746488318353,1.51633655060205,1.68353484709179,0.390361328888111,0,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0.351902248327898,0.43839146485515,0.278047249225598,1.0447564995665,1.02891068203972,0.398068533636986,0.702213187313235,0,0.284163499395593,0,0,0.180062061461015,0,0.590292695242212,0.462801338662135,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0,1.09775057645525,0.402619256281115,0,0.308713837137853,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.397912944082302,0.58489226135736,0,0,0,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.350679099451593,0.822074982615345,1.77132177575523,2.82597710114475,0.493588655687202,1.48226313543574,1.33476084572875,1.37591296579242,1.79889689907883,2.63718157805054,2.17059443777175,1.2731292589071,1.72617682470486,1.13494658742525,0.823684239564244,1.43768206527355,1.48856379067401,0.624075346229121,2.77836765741823,0.896987067609561,0.482443521363367,0.923765950833023,0.189491411770485,0.325929952884052,0.339490171550376,0,0.335012514883631,0.238043640886014,0,0.315270288212382,0.44292937929755,0.637819074629948,0.491589944147214,0.172684981865896,0.289298117163023,19.6028669121054,33.1782467129413,0,0.275936746304732,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0.445597348164788,0,0,0,0,0.321321316421807,0.567760340833074,0.178065603667255,0.977321756121456,1.81467135269789,0,0.728341908464944,0.302323556964751,0,2.65771703592696,0,0.775284879504663,0,0.356497378384721,0,0,0,0.340439605753788,0.540183282093931,0.905510786479282,0.428674070063185,0,0.356737635204141,0.329098041204242,0,2.3467170806371,1.90648863777438,0,1.15420377059036,0.484393280087717,0.241251699712623,0.716234064018819,0.164140899745061,0,0.370850604021019,2.22132145037209,0.412773735926445,0.370389054739423,0.941842285023455,0.27338845544205,0.686334519619568,0,0,0.138199973804424,0.954670618015114,0.158167996790568,0.813277868507395,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.495920734352016,0,0,0.621339313086926,0,1.49516546043979,0.827292452285488,0.388902376688095,0.129159823477731,0.168956125490778,0.469428954583016,0.13020438484395,0.314578033277133,0.241584120826006,0,0.632022241256357,0.608175645870493,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0.295379054349154,0.100966449948148,0.304827226619999,0.302478555410522,0.487289403698762,0.0962118416403295,0.233753804363138,0.453460767230423,0,0,0,0.772758376128762,6.94425159169373,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.682934423016537,0.729320151204882,0.419226325255965,1.10306105070008,0.222246727801615,1.64828045791115,2.24643446714271,1.26348605881899,0.760437899670719,0.943131706930381,0.561849044819294,1.02440243847791,1.26358031702349,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,1.02860775715625,0.70990322463735,1.43061713968393,1.45346416632329,0.376437521661322,0.761531471025089,0.914639864363863,1.05227884575137,0.271608227691724,1.12228454331548,1.54225523561426,0.591026894253381,0.818462086339379,0.309873682371932,2.12197272079256,1.24905288968973,1.40358965067245,1.28922632428979,2.29545998482612,0.441182838239031,2.08681052058379 | |||
|short_description=p@chr11:103265198..103265232,- | |||
}} |
Revision as of 18:25, 12 September 2013
Short description: | p@chr11:103265198..103265232, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:103265198..103265232, - |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.22e-07 | 4 |
myeloid leukocyte | 2.22e-07 | 4 |
phagocyte | 2.22e-07 | 4 |
monocyte | 2.22e-07 | 4 |
macrophage | 2.22e-07 | 4 |
tissue-resident macrophage | 2.22e-07 | 4 |
macrophage dendritic cell progenitor | 2.22e-07 | 4 |
monoblast | 2.22e-07 | 4 |
promonocyte | 2.22e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.