Personal tools

FFCP PHASE1:Mm9::chr11:23155980..23156000,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=103573|HGNC=|UniProt=Q6P5F9,A2AKT7,Q8BYY5|association_with_transcript=-40bp_to_ENSMUST00000020538,ENSMUST00000109551,NM_001035226,NM_134014,uc007iet.1_5end|description=CAGE_peak_4_at_Xpo1_5end|id=chr11:23155980..23156000,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!2.32e-07!51;UBERON:0003929!9.63e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0001048,7.01e-08,134;UBERON:0003929,4.90e-07,55;UBERON:0004177,6.94e-07,29;UBERON:0005057,6.94e-07,29|phase1_expression=0.960893082628764,1.74487703819681,0.454999239389536,2.11724947914781,3.00537437967808,2.51818907867835,1.63528848416868,0.387369970324729,5.490760163915,5.85161315804984,1.71217968225505,2.39316476986009,1.71200729931206,1.04904482902797,3.99731714178795,3.03712901084739,2.09868563438444,1.57731082679119,1.37114433605739,1.27316895539409,1.78590909317247,1.78723712161594,2.08959831311148,1.43993180514066,0.68822784320151,1.14846392823004,1.29228598847722,1.29282739611533,1.33016393619462,0.756090389279792,1.55211357458713,1.27006134691926,2.46025915033828,0,2.88851619751275,2.32728503501889,1.63335485009895,1.67412652294763,0,1.0470474879476,1.17646297606203,0.683045484958446,0.485510353031154,0.503587271902309,0.912392380975631,2.75320128242522,0.782391344348039,0,0.219686182734472,0.388859798148567,0.979904951377538,0,1.00669563634642,2.90144856804538,1.00828139742739,0.514518872071894,2.0057340795713,1.03134418455488,1.01158230429799,0.528990979272033,0.633831403506179,1.35537812827653,0.889294796111139,0,0,0,0,0.384218305321555,1.45165457231869,0.945041568321835,1.47227472945967,0.571301968807607,0.220868540951614,1.34739879136449,0.479227355091182,1.83843757322004,1.10115880999389,0.893811366596314,0.153606533256243,1.18697658957174,0.457438218012048,1.56274011167028,0.279182999001381,1.12552522006336,0.30559649555362,0.883885756421003,1.70846016958924,1.67759501242771,2.19605960666234,1.36028808192214,0.579728977403356,0,2.03991400112325,1.61910957491345,1.29955283489534,0.448026887097336,1.12355536105401,2.04516387093669,1.29893002301434,1.06001872353102,1.40843419776681,1.28326477414318,2.54805239706646,7.11066703153331,1.29894624606728,1.26679932737549,3.0331466700887,0.68510327831436,1.29468941823586,0.593768556259299,3.46970653532272,2.43572382649713,1.61430848079241,1.50722640552623,0.705532242814229,1.0053327306374,1.73036477414062,0.578397427679647,2.65383165584962,2.91180329905337,3.97514733228708,2.42437626567611,0,0.292780797011547,1.46612694769419,0.766371165625774,2.39630249011841,0,2.1601938602421,0.898743836428936,0,1.7591609295801,0.521472960576829,0.767146371990992,0.20778804455956,0.973447578406546,1.32391173005411,1.7416975885413,0.758168275301024,0.420883711772948,4.81445638962004,4.13823787980251,2.70093194708024,1.05493372485001,1.83698547708585,0.768682321709099,1.96773621575431,1.03481348295606,5.17363183038821,3.59301552318857,5.10258260075452,3.28793598641362,2.22437799380478,3.1342694986995,1.4404749548556,4.77682240364384,0,2.05878325691772,2.27330799516474,1.86413195281952,2.57978665979206,1.62055855314913,1.65721314909647,1.37734962223183,2.31400669331067,1.86027155800326,2.95100741539581,0.700592054203017,1.81015834904829,0.820837320395476,1.13496333364198,1.16959989940266,0.658650345873152,0.805238512562231,0.630869845692382,1.3377599609307,0.330418782983798,1.05780226665418,3.41261200856374,2.32236671860439,3.09281907173024,1.61346819698674,0.889512175379481,0.760902504450237,0.949058123089023,0.658795818896044,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,1.08069024937347,0.995706366271836,3.03468641524931,3.31320686568214,7.88954149711563,2.8511185898344,0.387904974335251,1.33258057791605,0.69560190836683,0.442830443938806,0.784993639206874,0.616985819609003,1.77871576252289,6.17326891149548,3.93117990226406,4.94696647246678,5.07150303471257,3.37648023653384,4.07401362850272,2.87696137450811,0.648540907100142,1.64736847912849,2.87536413054709,2.60498663367952,1.87222603868736,2.02063102357689,0.717589654087649,1.4473305640901,1.66277871149944,4.16881105895066,4.4000543639347,4.58311731593008,1.64283173801951,2.01007508930179,0.476087281772027,0.780534591431195,0.630540576424764,0.664394068946325,0.478364305972461,0.81931657357869,1.03610989119537,0.433947175744535,1.50791283939272,0.54390568381871,0.983528546038072,0.275936746304732,1.44495530989013,1.40654023910644,1.3114795630134,0.757412781613119,1.57754109708128,0.780877488593277,3.23135096599198,3.58453196928828,2.67358408898873,2.54768877709949,2.42886421004937,3.21481443702443,1.58115111178609,1.28528526568723,1.27746076687442,0.712262414669021,1.79175655288934,1.31976098378028,0,2.18502572539483,3.02323556964751,1.69744571780308,0.885905678642318,0.922305443831782,0.258428293168221,1.09060118843252,1.06949213515416,1.58018378967908,0,0,0.340439605753788,3.06103859853227,1.81102157295856,1.28602221018955,1.77340233642274,1.60531935841864,1.15184314421485,0.608929898229199,4.69343416127421,1.0591603543191,1.10264199027481,0.8244312647074,1.29171541356724,2.47282992205439,1.67121281604391,0.328281799490123,0.582961673259701,1.66882771809459,2.9048049735635,3.50857675537478,2.59272338317596,3.39063222608444,1.6403307326523,1.14389086603261,0.679913719975421,1.11961161858926,1.10559979043539,0,3.63786392618306,3.25311147402958,2.26811215725783,1.46361807210128,0.87345025498471,1.48350781023303,0.909188012978695,0,0.259229946583586,0,4.50954350947352,5.08356256549528,3.14371131868485,3.69457257853691,2.0665571756437,2.19642963138012,2.58185925020659,4.4269490846943,7.13043542094834,4.34851417486811,1.72818003754719,1.89606672376907,1.82452693761148,2.56777392912068,2.46849563657811,5.19177417435696,2.18549490259391,3.24527713703916,3.69223817936443,3.53382574818517,2.28620419965,3.52891647978942,1.46186821109629,2.30908419936791,1.63627663054197,0.680191150845634,6.43759264784788,11.8422290724508,6.04384618910682,0.772758376128762,0.563047426353546,1.09890974560359,1.92931541171159,0.501572104035363,1.12950368523413,0.920650473014354,0.572895513439397,0.343706364687375,1.37016503954128,0,0,0.900642406448441,0.453142408984205,1.03552062350364,6.43481555021895,2.39414924040619,3.07320490357441,2.67417388775123,1.67690530102386,3.12533964365024,1.77797382241292,1.23621034343337,3.20919209591815,3.03236654116557,1.77435509923168,1.69763707247469,1.77918864192777,1.79270426733634,2.35485422718014,3.33405583898152,1.73826488917283,3.08654752741928,2.47251540481984,3.09117732282234,2.40008476669791,1.59728225543404,1.90748951957857,1.0174249164263,1.59985946706062,1.77690676572521,1.82927972872773,1.31534855718921,1.62964936615034,1.68342681497322,2.13543032623513,1.57607171800902,0.818462086339379,3.09873682371932,1.54325288784913,0.249810577937946,1.63752125911786,1.07435527024149,0.382576664137687,0.661774257358546,1.62307484934295|short_description=p4@Xpo1}}
|EntrezGene=103573
|HGNC=
|UniProt=Q6P5F9,A2AKT7,Q8BYY5
|association_with_transcript=-40bp_to_ENSMUST00000020538,ENSMUST00000109551,NM_001035226,NM_134014,uc007iet.1_5end
|description=CAGE_peak_4_at_Xpo1_5end
|id=chr11:23155980..23156000,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005057!2.32e-07!51;UBERON:0003929!9.63e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0001048,7.01e-08,134;UBERON:0003929,4.90e-07,55;UBERON:0004177,6.94e-07,29;UBERON:0005057,6.94e-07,29
|phase1_expression=0.960893082628764,1.74487703819681,0.454999239389536,2.11724947914781,3.00537437967808,2.51818907867835,1.63528848416868,0.387369970324729,5.490760163915,5.85161315804984,1.71217968225505,2.39316476986009,1.71200729931206,1.04904482902797,3.99731714178795,3.03712901084739,2.09868563438444,1.57731082679119,1.37114433605739,1.27316895539409,1.78590909317247,1.78723712161594,2.08959831311148,1.43993180514066,0.68822784320151,1.14846392823004,1.29228598847722,1.29282739611533,1.33016393619462,0.756090389279792,1.55211357458713,1.27006134691926,2.46025915033828,0,2.88851619751275,2.32728503501889,1.63335485009895,1.67412652294763,0,1.0470474879476,1.17646297606203,0.683045484958446,0.485510353031154,0.503587271902309,0.912392380975631,2.75320128242522,0.782391344348039,0,0.219686182734472,0.388859798148567,0.979904951377538,0,1.00669563634642,2.90144856804538,1.00828139742739,0.514518872071894,2.0057340795713,1.03134418455488,1.01158230429799,0.528990979272033,0.633831403506179,1.35537812827653,0.889294796111139,0,0,0,0,0.384218305321555,1.45165457231869,0.945041568321835,1.47227472945967,0.571301968807607,0.220868540951614,1.34739879136449,0.479227355091182,1.83843757322004,1.10115880999389,0.893811366596314,0.153606533256243,1.18697658957174,0.457438218012048,1.56274011167028,0.279182999001381,1.12552522006336,0.30559649555362,0.883885756421003,1.70846016958924,1.67759501242771,2.19605960666234,1.36028808192214,0.579728977403356,0,2.03991400112325,1.61910957491345,1.29955283489534,0.448026887097336,1.12355536105401,2.04516387093669,1.29893002301434,1.06001872353102,1.40843419776681,1.28326477414318,2.54805239706646,7.11066703153331,1.29894624606728,1.26679932737549,3.0331466700887,0.68510327831436,1.29468941823586,0.593768556259299,3.46970653532272,2.43572382649713,1.61430848079241,1.50722640552623,0.705532242814229,1.0053327306374,1.73036477414062,0.578397427679647,2.65383165584962,2.91180329905337,3.97514733228708,2.42437626567611,0,0.292780797011547,1.46612694769419,0.766371165625774,2.39630249011841,0,2.1601938602421,0.898743836428936,0,1.7591609295801,0.521472960576829,0.767146371990992,0.20778804455956,0.973447578406546,1.32391173005411,1.7416975885413,0.758168275301024,0.420883711772948,4.81445638962004,4.13823787980251,2.70093194708024,1.05493372485001,1.83698547708585,0.768682321709099,1.96773621575431,1.03481348295606,5.17363183038821,3.59301552318857,5.10258260075452,3.28793598641362,2.22437799380478,3.1342694986995,1.4404749548556,4.77682240364384,0,2.05878325691772,2.27330799516474,1.86413195281952,2.57978665979206,1.62055855314913,1.65721314909647,1.37734962223183,2.31400669331067,1.86027155800326,2.95100741539581,0.700592054203017,1.81015834904829,0.820837320395476,1.13496333364198,1.16959989940266,0.658650345873152,0.805238512562231,0.630869845692382,1.3377599609307,0.330418782983798,1.05780226665418,3.41261200856374,2.32236671860439,3.09281907173024,1.61346819698674,0.889512175379481,0.760902504450237,0.949058123089023,0.658795818896044,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,1.08069024937347,0.995706366271836,3.03468641524931,3.31320686568214,7.88954149711563,2.8511185898344,0.387904974335251,1.33258057791605,0.69560190836683,0.442830443938806,0.784993639206874,0.616985819609003,1.77871576252289,6.17326891149548,3.93117990226406,4.94696647246678,5.07150303471257,3.37648023653384,4.07401362850272,2.87696137450811,0.648540907100142,1.64736847912849,2.87536413054709,2.60498663367952,1.87222603868736,2.02063102357689,0.717589654087649,1.4473305640901,1.66277871149944,4.16881105895066,4.4000543639347,4.58311731593008,1.64283173801951,2.01007508930179,0.476087281772027,0.780534591431195,0.630540576424764,0.664394068946325,0.478364305972461,0.81931657357869,1.03610989119537,0.433947175744535,1.50791283939272,0.54390568381871,0.983528546038072,0.275936746304732,1.44495530989013,1.40654023910644,1.3114795630134,0.757412781613119,1.57754109708128,0.780877488593277,3.23135096599198,3.58453196928828,2.67358408898873,2.54768877709949,2.42886421004937,3.21481443702443,1.58115111178609,1.28528526568723,1.27746076687442,0.712262414669021,1.79175655288934,1.31976098378028,0,2.18502572539483,3.02323556964751,1.69744571780308,0.885905678642318,0.922305443831782,0.258428293168221,1.09060118843252,1.06949213515416,1.58018378967908,0,0,0.340439605753788,3.06103859853227,1.81102157295856,1.28602221018955,1.77340233642274,1.60531935841864,1.15184314421485,0.608929898229199,4.69343416127421,1.0591603543191,1.10264199027481,0.8244312647074,1.29171541356724,2.47282992205439,1.67121281604391,0.328281799490123,0.582961673259701,1.66882771809459,2.9048049735635,3.50857675537478,2.59272338317596,3.39063222608444,1.6403307326523,1.14389086603261,0.679913719975421,1.11961161858926,1.10559979043539,0,3.63786392618306,3.25311147402958,2.26811215725783,1.46361807210128,0.87345025498471,1.48350781023303,0.909188012978695,0,0.259229946583586,0,4.50954350947352,5.08356256549528,3.14371131868485,3.69457257853691,2.0665571756437,2.19642963138012,2.58185925020659,4.4269490846943,7.13043542094834,4.34851417486811,1.72818003754719,1.89606672376907,1.82452693761148,2.56777392912068,2.46849563657811,5.19177417435696,2.18549490259391,3.24527713703916,3.69223817936443,3.53382574818517,2.28620419965,3.52891647978942,1.46186821109629,2.30908419936791,1.63627663054197,0.680191150845634,6.43759264784788,11.8422290724508,6.04384618910682,0.772758376128762,0.563047426353546,1.09890974560359,1.92931541171159,0.501572104035363,1.12950368523413,0.920650473014354,0.572895513439397,0.343706364687375,1.37016503954128,0,0,0.900642406448441,0.453142408984205,1.03552062350364,6.43481555021895,2.39414924040619,3.07320490357441,2.67417388775123,1.67690530102386,3.12533964365024,1.77797382241292,1.23621034343337,3.20919209591815,3.03236654116557,1.77435509923168,1.69763707247469,1.77918864192777,1.79270426733634,2.35485422718014,3.33405583898152,1.73826488917283,3.08654752741928,2.47251540481984,3.09117732282234,2.40008476669791,1.59728225543404,1.90748951957857,1.0174249164263,1.59985946706062,1.77690676572521,1.82927972872773,1.31534855718921,1.62964936615034,1.68342681497322,2.13543032623513,1.57607171800902,0.818462086339379,3.09873682371932,1.54325288784913,0.249810577937946,1.63752125911786,1.07435527024149,0.382576664137687,0.661774257358546,1.62307484934295
|short_description=p4@Xpo1
}}

Revision as of 19:16, 12 September 2013

Short description:p4@Xpo1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Xpo1_5end
Coexpression cluster:NA
Association with transcript: -40bp_to_ENSMUST00000020538, ENSMUST00000109551, NM_001035226, NM_134014, uc007iet.1_5end
EntrezGene:Xpo1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Xpo1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D92.20
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E25.10
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F86.17
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E14.95
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C54.58
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H32.47
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D97.13
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C43.53
thymus, neonate N07.CNhs11211.713-19D32.29
thymus, neonate N10.CNhs11194.748-24E43.53
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.84
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.04
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I86.43
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primordium7.01e-08134
gut epithelium4.90e-0755
hemopoietic organ6.94e-0729
immune organ6.94e-0729







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:23155980..23156000,%2B&oldid=2888065"