FFCP PHASE1:Mm9::chr11:31901842..31901853,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1283|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:31901842..31901853,+|id=chr11:31901842..31901853,+|ontology_enrichment_celltype=CL:0000117!2.53e-19!23;CL:0000337!2.53e-19!23;CL:0000540!4.35e-15!33;CL:0000047!4.35e-15!33;CL:0000031!4.35e-15!33;CL:0000404!4.35e-15!33;CL:0000221!9.72e-15!44;CL:0000133!9.72e-15!44;CL:0002319!2.63e-14!43;CL:0000393!1.78e-11!39;CL:0000211!1.78e-11!39;CL:0000055!5.66e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.68e-33,23;CL:0000337,1.68e-33,23;CL:0000540,1.57e-22,33;CL:0000047,1.57e-22,33;CL:0000031,1.57e-22,33;CL:0000404,1.57e-22,33;CL:0002319,3.51e-19,43;CL:0000221,1.12e-18,44;CL:0000133,1.12e-18,44;CL:0000393,1.21e-18,39;CL:0000211,1.21e-18,39;CL:0002321,1.21e-10,70;CL:0002609,6.49e-10,6;CL:0002611,9.73e-09,2;CL:0000723,1.61e-07,91;CL:0000048,1.61e-07,91;CL:0000034,7.18e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.88e-31!73;UBERON:0005743!5.88e-31!73;UBERON:0000073!1.22e-29!75;UBERON:0001016!1.22e-29!75;UBERON:0001049!1.42e-29!52;UBERON:0005068!1.42e-29!52;UBERON:0006241!1.42e-29!52;UBERON:0007135!1.42e-29!52;UBERON:0002346!6.24e-28!71;UBERON:0003075!6.24e-28!71;UBERON:0007284!6.24e-28!71;UBERON:0007811!1.61e-27!86;UBERON:0000955!2.74e-27!50;UBERON:0006238!2.74e-27!50;UBERON:0002020!4.03e-27!34;UBERON:0002616!3.79e-26!49;UBERON:0000153!9.24e-26!94;UBERON:0004121!2.46e-24!102;UBERON:0000924!2.46e-24!102;UBERON:0006601!2.46e-24!102;UBERON:0000033!3.73e-24!63;UBERON:0003080!3.75e-24!40;UBERON:0002780!1.90e-23!39;UBERON:0001890!1.90e-23!39;UBERON:0006240!1.90e-23!39;UBERON:0003056!3.48e-22!49;UBERON:0002791!1.06e-21!29;UBERON:0003528!1.06e-21!29;UBERON:0001893!1.06e-21!29;UBERON:0000956!4.68e-14!21;UBERON:0001869!4.68e-14!21;UBERON:0000203!4.68e-14!21;UBERON:0000064!1.86e-11!99;UBERON:0002619!9.58e-11!17;UBERON:0002420!5.47e-09!8;UBERON:0007245!5.47e-09!8;UBERON:0010009!5.47e-09!8;UBERON:0010011!5.47e-09!8;UBERON:0000454!5.47e-09!8;UBERON:0000477!4.07e-08!154;UBERON:0000483!1.28e-07!181;UBERON:0000119!2.40e-07!183;UBERON:0000475!3.05e-07!200;UBERON:0002021!3.65e-07!10;UBERON:0000411!3.65e-07!10;UBERON:0001950!3.65e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.58e-29,34;UBERON:0001017,2.08e-21,73;UBERON:0001016,9.67e-21,75;UBERON:0003528,1.40e-19,29;UBERON:0002791,1.40e-19,29;UBERON:0001893,1.40e-19,29;UBERON:0000073,2.31e-19,54;UBERON:0001049,6.21e-18,52;UBERON:0005068,6.21e-18,52;UBERON:0006241,6.21e-18,52;UBERON:0007135,6.21e-18,52;UBERON:0004121,1.35e-15,95;UBERON:0000924,1.35e-15,95;UBERON:0006601,1.35e-15,95;UBERON:0002346,5.55e-14,64;UBERON:0003075,5.55e-14,64;UBERON:0007284,5.55e-14,64;UBERON:0002780,5.93e-14,39;UBERON:0001890,5.93e-14,39;UBERON:0006240,5.93e-14,39;UBERON:0003080,1.52e-13,40;UBERON:0000955,3.37e-13,47;UBERON:0006238,3.37e-13,47;UBERON:0000956,3.37e-13,21;UBERON:0001869,3.37e-13,21;UBERON:0000203,3.37e-13,21;UBERON:0001948,1.65e-12,5;UBERON:0002315,1.65e-12,5;UBERON:0010371,7.22e-12,73;UBERON:0002616,1.81e-11,46;UBERON:0003056,1.28e-10,49;UBERON:0002240,1.92e-10,6;UBERON:0005174,1.92e-10,6;UBERON:0001137,1.92e-10,6;UBERON:0002619,4.76e-10,17;UBERON:0002021,1.42e-09,10;UBERON:0000411,1.42e-09,10;UBERON:0001950,1.42e-09,10;UBERON:0010314,9.28e-09,92;UBERON:0002256,9.73e-09,2;UBERON:0002420,1.17e-07,8;UBERON:0007245,1.17e-07,8;UBERON:0010009,1.17e-07,8;UBERON:0010011,1.17e-07,8;UBERON:0000454,1.17e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0.388859798148567,0,1.43752564364972,0,0.725362142011344,1.68046899571232,0,0,0,1.41621522601718,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,1.24427534770173,4.18518408828241,0.210324961351382,1.71390590642282,1.54607978666129,1.10241719293459,1.24599112323707,0,0,0.638436690425939,1.22885226604995,1.58263545276233,2.01272815925301,0.52091337055676,0.558365998002762,1.12552522006336,1.37518422999129,0.589257170947335,1.70846016958924,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.879580464790051,0.347648640384553,0.511430914660661,0.83115217823824,0.324482526135515,0,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1883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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1283 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:31901842..31901853,+ | |||
|id=chr11:31901842..31901853,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.53e-19!23;CL:0000337!2.53e-19!23;CL:0000540!4.35e-15!33;CL:0000047!4.35e-15!33;CL:0000031!4.35e-15!33;CL:0000404!4.35e-15!33;CL:0000221!9.72e-15!44;CL:0000133!9.72e-15!44;CL:0002319!2.63e-14!43;CL:0000393!1.78e-11!39;CL:0000211!1.78e-11!39;CL:0000055!5.66e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.68e-33,23;CL:0000337,1.68e-33,23;CL:0000540,1.57e-22,33;CL:0000047,1.57e-22,33;CL:0000031,1.57e-22,33;CL:0000404,1.57e-22,33;CL:0002319,3.51e-19,43;CL:0000221,1.12e-18,44;CL:0000133,1.12e-18,44;CL:0000393,1.21e-18,39;CL:0000211,1.21e-18,39;CL:0002321,1.21e-10,70;CL:0002609,6.49e-10,6;CL:0002611,9.73e-09,2;CL:0000723,1.61e-07,91;CL:0000048,1.61e-07,91;CL:0000034,7.18e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.88e-31!73;UBERON:0005743!5.88e-31!73;UBERON:0000073!1.22e-29!75;UBERON:0001016!1.22e-29!75;UBERON:0001049!1.42e-29!52;UBERON:0005068!1.42e-29!52;UBERON:0006241!1.42e-29!52;UBERON:0007135!1.42e-29!52;UBERON:0002346!6.24e-28!71;UBERON:0003075!6.24e-28!71;UBERON:0007284!6.24e-28!71;UBERON:0007811!1.61e-27!86;UBERON:0000955!2.74e-27!50;UBERON:0006238!2.74e-27!50;UBERON:0002020!4.03e-27!34;UBERON:0002616!3.79e-26!49;UBERON:0000153!9.24e-26!94;UBERON:0004121!2.46e-24!102;UBERON:0000924!2.46e-24!102;UBERON:0006601!2.46e-24!102;UBERON:0000033!3.73e-24!63;UBERON:0003080!3.75e-24!40;UBERON:0002780!1.90e-23!39;UBERON:0001890!1.90e-23!39;UBERON:0006240!1.90e-23!39;UBERON:0003056!3.48e-22!49;UBERON:0002791!1.06e-21!29;UBERON:0003528!1.06e-21!29;UBERON:0001893!1.06e-21!29;UBERON:0000956!4.68e-14!21;UBERON:0001869!4.68e-14!21;UBERON:0000203!4.68e-14!21;UBERON:0000064!1.86e-11!99;UBERON:0002619!9.58e-11!17;UBERON:0002420!5.47e-09!8;UBERON:0007245!5.47e-09!8;UBERON:0010009!5.47e-09!8;UBERON:0010011!5.47e-09!8;UBERON:0000454!5.47e-09!8;UBERON:0000477!4.07e-08!154;UBERON:0000483!1.28e-07!181;UBERON:0000119!2.40e-07!183;UBERON:0000475!3.05e-07!200;UBERON:0002021!3.65e-07!10;UBERON:0000411!3.65e-07!10;UBERON:0001950!3.65e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.58e-29,34;UBERON:0001017,2.08e-21,73;UBERON:0001016,9.67e-21,75;UBERON:0003528,1.40e-19,29;UBERON:0002791,1.40e-19,29;UBERON:0001893,1.40e-19,29;UBERON:0000073,2.31e-19,54;UBERON:0001049,6.21e-18,52;UBERON:0005068,6.21e-18,52;UBERON:0006241,6.21e-18,52;UBERON:0007135,6.21e-18,52;UBERON:0004121,1.35e-15,95;UBERON:0000924,1.35e-15,95;UBERON:0006601,1.35e-15,95;UBERON:0002346,5.55e-14,64;UBERON:0003075,5.55e-14,64;UBERON:0007284,5.55e-14,64;UBERON:0002780,5.93e-14,39;UBERON:0001890,5.93e-14,39;UBERON:0006240,5.93e-14,39;UBERON:0003080,1.52e-13,40;UBERON:0000955,3.37e-13,47;UBERON:0006238,3.37e-13,47;UBERON:0000956,3.37e-13,21;UBERON:0001869,3.37e-13,21;UBERON:0000203,3.37e-13,21;UBERON:0001948,1.65e-12,5;UBERON:0002315,1.65e-12,5;UBERON:0010371,7.22e-12,73;UBERON:0002616,1.81e-11,46;UBERON:0003056,1.28e-10,49;UBERON:0002240,1.92e-10,6;UBERON:0005174,1.92e-10,6;UBERON:0001137,1.92e-10,6;UBERON:0002619,4.76e-10,17;UBERON:0002021,1.42e-09,10;UBERON:0000411,1.42e-09,10;UBERON:0001950,1.42e-09,10;UBERON:0010314,9.28e-09,92;UBERON:0002256,9.73e-09,2;UBERON:0002420,1.17e-07,8;UBERON:0007245,1.17e-07,8;UBERON:0010009,1.17e-07,8;UBERON:0010011,1.17e-07,8;UBERON:0000454,1.17e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0.388859798148567,0,1.43752564364972,0,0.725362142011344,1.68046899571232,0,0,0,1.41621522601718,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,1.24427534770173,4.18518408828241,0.210324961351382,1.71390590642282,1.54607978666129,1.10241719293459,1.24599112323707,0,0,0.638436690425939,1.22885226604995,1.58263545276233,2.01272815925301,0.52091337055676,0.558365998002762,1.12552522006336,1.37518422999129,0.589257170947335,1.70846016958924,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.879580464790051,0.347648640384553,0.511430914660661,0.83115217823824,0.324482526135515,0,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0.129920822977795,0.179026695667481,0.79472541912506,0.240390899039938,0.147689527174577,0.403865799792591,0.304827226619999,0.403304740547362,0.779663045918019,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,2.86447756719698,0.859265911718438,0.685082519770642,0,2.02506750069542,0,2.71885445390523,0.51776031175182,0.103787347584177,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0.252697211763798,0,0,0.280924522409647,0.192075457214608,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:31901842..31901853,+ | |||
}} |
Revision as of 19:26, 12 September 2013
Short description: | p@chr11:31901842..31901853, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:31901842..31901853, + |
Coexpression cluster: | MCL_coexpression_mm9:1283 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.68e-33 | 23 |
neuroblast (sensu Vertebrata) | 1.68e-33 | 23 |
neuron | 1.57e-22 | 33 |
neuronal stem cell | 1.57e-22 | 33 |
neuroblast | 1.57e-22 | 33 |
electrically signaling cell | 1.57e-22 | 33 |
neural cell | 3.51e-19 | 43 |
ectodermal cell | 1.12e-18 | 44 |
neurectodermal cell | 1.12e-18 | 44 |
electrically responsive cell | 1.21e-18 | 39 |
electrically active cell | 1.21e-18 | 39 |
embryonic cell | 1.21e-10 | 70 |
neuron of cerebral cortex | 6.49e-10 | 6 |
neuron of the dorsal spinal cord | 9.73e-09 | 2 |
somatic stem cell | 1.61e-07 | 91 |
multi fate stem cell | 1.61e-07 | 91 |
stem cell | 7.18e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.