FFCP PHASE1:Mm9::chr11:98210367..98210383,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19049|HGNC=|MCL_coexpression_id=2013|UniProt=Q60829|association_with_transcript=315bp_to_NM_144828,uc007lfz.1_5end|description=CAGE_peak_7_at_Ppp1r1b_5end|id=chr11:98210367..98210383,+|ontology_enrichment_celltype=CL:0002563!1.48e-09!9;CL:0002251!1.48e-09!9;CL:0000239!5.81e-07!6;CL:0000677!5.81e-07!6;CL:0000212!5.81e-07!6;CL:0000584!5.81e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,1.01e-20,9;CL:0002251,1.01e-20,9;CL:0000239,1.62e-14,6;CL:0000677,1.62e-14,6;CL:0000584,1.62e-14,6;CL:0000075,2.40e-12,7;CL:0002076,9.08e-12,15;CL:0000066,1.16e-09,25;CL:0000223,2.03e-08,20;CL:0002250,8.91e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.04e-14!15;UBERON:0001242!4.69e-13!13;UBERON:0000060!4.69e-13!13;UBERON:0001262!4.69e-13!13;UBERON:0004786!4.69e-13!13;UBERON:0000160!2.66e-11!43;UBERON:0003350!1.48e-09!9;UBERON:0004808!1.48e-09!9;UBERON:0001277!1.48e-09!9;UBERON:0005409!2.98e-09!59;UBERON:0000064!1.36e-08!99;UBERON:0004923!4.52e-08!24;UBERON:0000485!2.80e-07!11;UBERON:0000955!7.91e-07!50;UBERON:0006238!7.91e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.97e-33,15;UBERON:0000160,1.30e-30,31;UBERON:0001242,3.89e-29,13;UBERON:0001262,3.89e-29,13;UBERON:0004786,3.89e-29,13;UBERON:0003350,1.01e-20,9;UBERON:0004808,1.01e-20,9;UBERON:0001277,1.01e-20,9;UBERON:0005409,1.04e-20,47;UBERON:0004923,2.01e-19,24;UBERON:0000485,1.19e-16,11;UBERON:0002108,2.60e-10,4;UBERON:0007023,3.36e-10,51;UBERON:0000331,6.77e-08,3;UBERON:0002116,6.77e-08,3;UBERON:0001204,6.77e-08,3;UBERON:0001168,6.77e-08,3;UBERON:0001007,7.76e-08,116;UBERON:0001555,7.76e-08,116;UBERON:0007026,7.76e-08,116;UBERON:0004119,1.31e-07,118;UBERON:0000925,1.31e-07,118;UBERON:0006595,1.31e-07,118|phase1_expression=0,1.04692622291808,1.36499771816861,3.93203474698879,5.00895729946347,2.18243053485457,1.16806320297763,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,1.59992422793407,1.14704640533585,1.14846392823004,2.15380998079537,0.861884930743556,2.66032787238923,1.26015064879965,1.33038306393183,0,0,0,1.73310971850765,1.99481574430191,1.22501613757421,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0.270011876663381,0,0,0,0.122490799214954,0.191690942036473,0,0,0.383062014255563,0,0,0,0,0.279182999001381,0,0.45839474333043,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,1.75668478206928,3.97948742945565,1.02182822083437,0,0,0,0.449371918214468,10.0650132620098,0.628271760564322,2.25971616249959,2.55715457330331,0.83115217823824,2.27137768294861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.462801338662135,0,0.268273401399619,0.116765342367169,0.329119699826961,0,0,0.146199987425332,0,0.134206418760372,0.630869845692382,0.205809224758569,1.32167513193519,2.64450566663544,0,0.232236671860439,0,0,0.667134131534611,0.570676878337677,3.32170343081158,0.329397909448022,0,0.596869416123452,1.16978452271472,4.49409704327111,1.72910439899755,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0.941992367048249,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,3.20628920292836,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.90730481304255,4.34937519160848,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.419437377702843,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,1.03111909406213,0,0.755393897389701,0.675022500231806,2.2516060161211,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p7@Ppp1r1b}} | ||
|EntrezGene=19049 | |||
|HGNC= | |||
|MCL_coexpression_id=2013 | |||
|UniProt=Q60829 | |||
|association_with_transcript=315bp_to_NM_144828,uc007lfz.1_5end | |||
|description=CAGE_peak_7_at_Ppp1r1b_5end | |||
|id=chr11:98210367..98210383,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.48e-09!9;CL:0002251!1.48e-09!9;CL:0000239!5.81e-07!6;CL:0000677!5.81e-07!6;CL:0000212!5.81e-07!6;CL:0000584!5.81e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.01e-20,9;CL:0002251,1.01e-20,9;CL:0000239,1.62e-14,6;CL:0000677,1.62e-14,6;CL:0000584,1.62e-14,6;CL:0000075,2.40e-12,7;CL:0002076,9.08e-12,15;CL:0000066,1.16e-09,25;CL:0000223,2.03e-08,20;CL:0002250,8.91e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.04e-14!15;UBERON:0001242!4.69e-13!13;UBERON:0000060!4.69e-13!13;UBERON:0001262!4.69e-13!13;UBERON:0004786!4.69e-13!13;UBERON:0000160!2.66e-11!43;UBERON:0003350!1.48e-09!9;UBERON:0004808!1.48e-09!9;UBERON:0001277!1.48e-09!9;UBERON:0005409!2.98e-09!59;UBERON:0000064!1.36e-08!99;UBERON:0004923!4.52e-08!24;UBERON:0000485!2.80e-07!11;UBERON:0000955!7.91e-07!50;UBERON:0006238!7.91e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.97e-33,15;UBERON:0000160,1.30e-30,31;UBERON:0001242,3.89e-29,13;UBERON:0001262,3.89e-29,13;UBERON:0004786,3.89e-29,13;UBERON:0003350,1.01e-20,9;UBERON:0004808,1.01e-20,9;UBERON:0001277,1.01e-20,9;UBERON:0005409,1.04e-20,47;UBERON:0004923,2.01e-19,24;UBERON:0000485,1.19e-16,11;UBERON:0002108,2.60e-10,4;UBERON:0007023,3.36e-10,51;UBERON:0000331,6.77e-08,3;UBERON:0002116,6.77e-08,3;UBERON:0001204,6.77e-08,3;UBERON:0001168,6.77e-08,3;UBERON:0001007,7.76e-08,116;UBERON:0001555,7.76e-08,116;UBERON:0007026,7.76e-08,116;UBERON:0004119,1.31e-07,118;UBERON:0000925,1.31e-07,118;UBERON:0006595,1.31e-07,118 | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,3.93203474698879,5.00895729946347,2.18243053485457,1.16806320297763,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,1.59992422793407,1.14704640533585,1.14846392823004,2.15380998079537,0.861884930743556,2.66032787238923,1.26015064879965,1.33038306393183,0,0,0,1.73310971850765,1.99481574430191,1.22501613757421,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0.270011876663381,0,0,0,0.122490799214954,0.191690942036473,0,0,0.383062014255563,0,0,0,0,0.279182999001381,0,0.45839474333043,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,1.75668478206928,3.97948742945565,1.02182822083437,0,0,0,0.449371918214468,10.0650132620098,0.628271760564322,2.25971616249959,2.55715457330331,0.83115217823824,2.27137768294861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.462801338662135,0,0.268273401399619,0.116765342367169,0.329119699826961,0,0,0.146199987425332,0,0.134206418760372,0.630869845692382,0.205809224758569,1.32167513193519,2.64450566663544,0,0.232236671860439,0,0,0.667134131534611,0.570676878337677,3.32170343081158,0.329397909448022,0,0.596869416123452,1.16978452271472,4.49409704327111,1.72910439899755,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0.941992367048249,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,3.20628920292836,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.90730481304255,4.34937519160848,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.419437377702843,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,1.03111909406213,0,0.755393897389701,0.675022500231806,2.2516060161211,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p7@Ppp1r1b | |||
}} |
Revision as of 21:47, 12 September 2013
Short description: | p7@Ppp1r1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ppp1r1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2013 |
Association with transcript: | 315bp_to_NM_144828, uc007lfz.1_5end |
EntrezGene: | Ppp1r1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.01e-20 | 9 |
epithelial cell of alimentary canal | 1.01e-20 | 9 |
brush border epithelial cell | 1.62e-14 | 6 |
gut absorptive cell | 1.62e-14 | 6 |
enterocyte | 1.62e-14 | 6 |
columnar/cuboidal epithelial cell | 2.40e-12 | 7 |
endo-epithelial cell | 9.08e-12 | 15 |
epithelial cell | 1.16e-09 | 25 |
endodermal cell | 2.03e-08 | 20 |
intestinal crypt stem cell | 8.91e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.97e-33 | 15 |
intestine | 1.30e-30 | 31 |
intestinal mucosa | 3.89e-29 | 13 |
wall of intestine | 3.89e-29 | 13 |
gastrointestinal system mucosa | 3.89e-29 | 13 |
epithelium of mucosa | 1.01e-20 | 9 |
gastrointestinal system epithelium | 1.01e-20 | 9 |
intestinal epithelium | 1.01e-20 | 9 |
gastrointestinal system | 1.04e-20 | 47 |
organ component layer | 2.01e-19 | 24 |
simple columnar epithelium | 1.19e-16 | 11 |
small intestine | 2.60e-10 | 4 |
adult organism | 3.36e-10 | 51 |
ileal mucosa | 6.77e-08 | 3 |
ileum | 6.77e-08 | 3 |
mucosa of small intestine | 6.77e-08 | 3 |
wall of small intestine | 6.77e-08 | 3 |
digestive system | 7.76e-08 | 116 |
digestive tract | 7.76e-08 | 116 |
primitive gut | 7.76e-08 | 116 |
endoderm-derived structure | 1.31e-07 | 118 |
endoderm | 1.31e-07 | 118 |
presumptive endoderm | 1.31e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.