FFCP PHASE1:Mm9::chr12:80310265..80310281,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:80310265..80310281,+|id=chr12:80310265..80310281,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,4.75e-10,6;CL:0000556,4.75e-10,6;CL:0000945,1.78e-07,1;CL:0000236,1.78e-07,1;CL:0000826,1.78e-07,1;CL:0002374,2.74e-07,1;CL:0000202,2.74e-07,1;CL:0000199,2.74e-07,1;CL:0000855,2.74e-07,1;CL:0000589,2.74e-07,1;CL:0000355,4.09e-07,9;CL:0000050,7.19e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.98e-20,3;DOID:4045,2.98e-20,3;DOID:0050686,2.00e-10,6|ontology_enrichment_uberon=UBERON:0003102!2.95e-09!23;UBERON:0000014!6.87e-07!5;UBERON:0001003!6.87e-07!5;UBERON:0002097!6.87e-07!5;UBERON:0002199!6.87e-07!5;UBERON:0007029!6.87e-07!5;UBERON:0007376!6.87e-07!5;UBERON:0002416!6.87e-07!5;UBERON:0007383!6.87e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.36e-09,11;UBERON:0003077,1.36e-09,11;UBERON:0007285,1.36e-09,11;UBERON:0002204,3.31e-09,32;UBERON:0001723,2.05e-07,1;UBERON:0001033,2.05e-07,1;UBERON:0010056,2.05e-07,1;UBERON:0000996,2.37e-07,1;UBERON:0000029,3.16e-07,1;UBERON:0001097,3.16e-07,1;UBERON:0003968,3.16e-07,1;UBERON:0001467,3.16e-07,1;UBERON:0001134,4.09e-07,9;UBERON:0002036,4.09e-07,9;UBERON:0002385,4.09e-07,9;UBERON:0000486,4.09e-07,9;UBERON:0007503,4.09e-07,9;UBERON:0001015,4.09e-07,9;UBERON:0002329,4.09e-07,9;UBERON:0003082,4.09e-07,9;UBERON:0003059,4.09e-07,9;UBERON:0007282,4.09e-07,9;UBERON:0004290,4.09e-07,9;UBERON:0009618,4.09e-07,9|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0.809901069559304,0,2.20823515750766,1.91960207048034,1.69755860719212,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2748345827406,15.626706890476,14.1351410872926,23.5292595212406,21.8574555186703,16.0218416500281,0,0,0,0,0,0,0,0,0,1.67782606057736,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0,0.172684981865896,0.578596234326046,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0.65954501176592,0.645857706783622,0.482503399425247,0.477489376012546,0.984845398470368,0.291480836629851,0,0.854354403989263,0,0.370389054739423,0.188368457004691,0.27338845544205,0.686334519619568,0.169978429993855,0.839708713941948,0.690999869022119,0,0,0,0.540026704109006,0.627264888043406,0,0.674321731924103,0.330613822901344,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0.19318959403219,0,0,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0.429742108096597,0.191288332068843,0,0.463735671240843|short_description=p@chr12:80310265..80310281,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:80310265..80310281,+ | |||
|id=chr12:80310265..80310281,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.75e-10,6;CL:0000556,4.75e-10,6;CL:0000945,1.78e-07,1;CL:0000236,1.78e-07,1;CL:0000826,1.78e-07,1;CL:0002374,2.74e-07,1;CL:0000202,2.74e-07,1;CL:0000199,2.74e-07,1;CL:0000855,2.74e-07,1;CL:0000589,2.74e-07,1;CL:0000355,4.09e-07,9;CL:0000050,7.19e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.98e-20,3;DOID:4045,2.98e-20,3;DOID:0050686,2.00e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.95e-09!23;UBERON:0000014!6.87e-07!5;UBERON:0001003!6.87e-07!5;UBERON:0002097!6.87e-07!5;UBERON:0002199!6.87e-07!5;UBERON:0007029!6.87e-07!5;UBERON:0007376!6.87e-07!5;UBERON:0002416!6.87e-07!5;UBERON:0007383!6.87e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.36e-09,11;UBERON:0003077,1.36e-09,11;UBERON:0007285,1.36e-09,11;UBERON:0002204,3.31e-09,32;UBERON:0001723,2.05e-07,1;UBERON:0001033,2.05e-07,1;UBERON:0010056,2.05e-07,1;UBERON:0000996,2.37e-07,1;UBERON:0000029,3.16e-07,1;UBERON:0001097,3.16e-07,1;UBERON:0003968,3.16e-07,1;UBERON:0001467,3.16e-07,1;UBERON:0001134,4.09e-07,9;UBERON:0002036,4.09e-07,9;UBERON:0002385,4.09e-07,9;UBERON:0000486,4.09e-07,9;UBERON:0007503,4.09e-07,9;UBERON:0001015,4.09e-07,9;UBERON:0002329,4.09e-07,9;UBERON:0003082,4.09e-07,9;UBERON:0003059,4.09e-07,9;UBERON:0007282,4.09e-07,9;UBERON:0004290,4.09e-07,9;UBERON:0009618,4.09e-07,9 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0.809901069559304,0,2.20823515750766,1.91960207048034,1.69755860719212,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2748345827406,15.626706890476,14.1351410872926,23.5292595212406,21.8574555186703,16.0218416500281,0,0,0,0,0,0,0,0,0,1.67782606057736,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0,0.172684981865896,0.578596234326046,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0.65954501176592,0.645857706783622,0.482503399425247,0.477489376012546,0.984845398470368,0.291480836629851,0,0.854354403989263,0,0.370389054739423,0.188368457004691,0.27338845544205,0.686334519619568,0.169978429993855,0.839708713941948,0.690999869022119,0,0,0,0.540026704109006,0.627264888043406,0,0.674321731924103,0.330613822901344,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0.19318959403219,0,0,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0.429742108096597,0.191288332068843,0,0.463735671240843 | |||
|short_description=p@chr12:80310265..80310281,+ | |||
}} |
Revision as of 23:20, 12 September 2013
Short description: | p@chr12:80310265..80310281, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:80310265..80310281, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.75e-10 | 6 |
megakaryocyte | 4.75e-10 | 6 |
lymphocyte of B lineage | 1.78e-07 | 1 |
B cell | 1.78e-07 | 1 |
pro-B cell | 1.78e-07 | 1 |
ear hair cell | 2.74e-07 | 1 |
auditory hair cell | 2.74e-07 | 1 |
mechanoreceptor cell | 2.74e-07 | 1 |
sensory hair cell | 2.74e-07 | 1 |
cochlear inner hair cell | 2.74e-07 | 1 |
multi-potent skeletal muscle stem cell | 4.09e-07 | 9 |
megakaryocyte-erythroid progenitor cell | 7.19e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.36e-09 | 11 |
paraxial mesoderm | 1.36e-09 | 11 |
presumptive paraxial mesoderm | 1.36e-09 | 11 |
musculoskeletal system | 3.31e-09 | 32 |
tongue | 2.05e-07 | 1 |
gustatory system | 2.05e-07 | 1 |
future tongue | 2.05e-07 | 1 |
vagina | 2.37e-07 | 1 |
lymph node | 3.16e-07 | 1 |
axillary lymph node | 3.16e-07 | 1 |
peripheral lymph node | 3.16e-07 | 1 |
shoulder | 3.16e-07 | 1 |
skeletal muscle tissue | 4.09e-07 | 9 |
striated muscle tissue | 4.09e-07 | 9 |
muscle tissue | 4.09e-07 | 9 |
multilaminar epithelium | 4.09e-07 | 9 |
epithelial vesicle | 4.09e-07 | 9 |
musculature | 4.09e-07 | 9 |
somite | 4.09e-07 | 9 |
myotome | 4.09e-07 | 9 |
presomitic mesoderm | 4.09e-07 | 9 |
presumptive segmental plate | 4.09e-07 | 9 |
dermomyotome | 4.09e-07 | 9 |
trunk paraxial mesoderm | 4.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.98e-20 | 3 |
muscle cancer | 2.98e-20 | 3 |
organ system cancer | 2.00e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.