FFCP PHASE1:Mm9::chr13:109001454..109001477,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=198|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:109001454..109001477,+|id=chr13:109001454..109001477,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,8.96e-08,1;CL:0002078,8.96e-08,1;CL:0000115,8.96e-08,1;CL:0002262,8.96e-08,1;CL:1000398,8.96e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!3.37e-13!5;UBERON:0001003!3.37e-13!5;UBERON:0002097!3.37e-13!5;UBERON:0002199!3.37e-13!5;UBERON:0007029!3.37e-13!5;UBERON:0007376!3.37e-13!5;UBERON:0002416!3.37e-13!5;UBERON:0007383!3.37e-13!5;UBERON:0003102!2.94e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000014,4.65e-35,5;UBERON:0001003,4.65e-35,5;UBERON:0002097,4.65e-35,5;UBERON:0002199,4.65e-35,5;UBERON:0007029,4.65e-35,5;UBERON:0007376,4.65e-35,5;UBERON:0002416,4.65e-35,5;UBERON:0007383,4.65e-35,5;UBERON:0003102,5.09e-15,22;UBERON:0002394,8.96e-08,1;UBERON:0001281,8.96e-08,1;UBERON:0000353,8.96e-08,1;UBERON:0003497,8.96e-08,1;UBERON:0003909,8.96e-08,1;UBERON:0003928,8.96e-08,1;UBERON:0003835,8.96e-08,1;UBERON:0003513,8.96e-08,1;UBERON:0001280,8.96e-08,1;UBERON:0004647,8.96e-08,1;UBERON:0002294,8.96e-08,1;UBERON:0001173,8.96e-08,1;UBERON:0004912,8.96e-08,1;UBERON:0005171,8.96e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0,0,0,0,0,0.60281927134286,0,0,0,0,0,0,0,0,0,2.78601733217733,9.67176041117334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,3.62749756471256,25.8343082713449,20.8079591002138,44.2871396251636,29.545361954111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.581385666529314,0.188218760830661,0.507687647350059,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0,1.54325288784913,0.249810577937946,2.33931608445408,5.58664740525576,3.06061331310149,5.07360263974886,0.927471342481686|short_description=p@chr13:109001454..109001477,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=198 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:109001454..109001477,+ | |||
|id=chr13:109001454..109001477,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,8.96e-08,1;CL:0002078,8.96e-08,1;CL:0000115,8.96e-08,1;CL:0002262,8.96e-08,1;CL:1000398,8.96e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!3.37e-13!5;UBERON:0001003!3.37e-13!5;UBERON:0002097!3.37e-13!5;UBERON:0002199!3.37e-13!5;UBERON:0007029!3.37e-13!5;UBERON:0007376!3.37e-13!5;UBERON:0002416!3.37e-13!5;UBERON:0007383!3.37e-13!5;UBERON:0003102!2.94e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,4.65e-35,5;UBERON:0001003,4.65e-35,5;UBERON:0002097,4.65e-35,5;UBERON:0002199,4.65e-35,5;UBERON:0007029,4.65e-35,5;UBERON:0007376,4.65e-35,5;UBERON:0002416,4.65e-35,5;UBERON:0007383,4.65e-35,5;UBERON:0003102,5.09e-15,22;UBERON:0002394,8.96e-08,1;UBERON:0001281,8.96e-08,1;UBERON:0000353,8.96e-08,1;UBERON:0003497,8.96e-08,1;UBERON:0003909,8.96e-08,1;UBERON:0003928,8.96e-08,1;UBERON:0003835,8.96e-08,1;UBERON:0003513,8.96e-08,1;UBERON:0001280,8.96e-08,1;UBERON:0004647,8.96e-08,1;UBERON:0002294,8.96e-08,1;UBERON:0001173,8.96e-08,1;UBERON:0004912,8.96e-08,1;UBERON:0005171,8.96e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0,0,0,0,0,0.60281927134286,0,0,0,0,0,0,0,0,0,2.78601733217733,9.67176041117334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,3.62749756471256,25.8343082713449,20.8079591002138,44.2871396251636,29.545361954111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.581385666529314,0.188218760830661,0.507687647350059,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0,1.54325288784913,0.249810577937946,2.33931608445408,5.58664740525576,3.06061331310149,5.07360263974886,0.927471342481686 | |||
|short_description=p@chr13:109001454..109001477,+ | |||
}} |
Revision as of 23:49, 12 September 2013
Short description: | p@chr13:109001454..109001477, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:109001454..109001477, + |
Coexpression cluster: | MCL_coexpression_mm9:198 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 8.96e-08 | 1 |
meso-epithelial cell | 8.96e-08 | 1 |
endothelial cell | 8.96e-08 | 1 |
endothelial cell of sinusoid | 8.96e-08 | 1 |
endothelial cell of hepatic sinusoid | 8.96e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 4.65e-35 | 5 |
skin epidermis | 4.65e-35 | 5 |
skin of body | 4.65e-35 | 5 |
integument | 4.65e-35 | 5 |
surface | 4.65e-35 | 5 |
outer epithelium | 4.65e-35 | 5 |
integumental system | 4.65e-35 | 5 |
enveloping layer of ectoderm | 4.65e-35 | 5 |
surface structure | 5.09e-15 | 22 |
bile duct | 8.96e-08 | 1 |
hepatic sinusoid | 8.96e-08 | 1 |
parenchyma | 8.96e-08 | 1 |
abdomen blood vessel | 8.96e-08 | 1 |
sinusoid | 8.96e-08 | 1 |
digestive system duct | 8.96e-08 | 1 |
abdominal segment blood vessel | 8.96e-08 | 1 |
trunk blood vessel | 8.96e-08 | 1 |
liver parenchyma | 8.96e-08 | 1 |
liver lobule | 8.96e-08 | 1 |
biliary system | 8.96e-08 | 1 |
biliary tree | 8.96e-08 | 1 |
biliary bud | 8.96e-08 | 1 |
hepatic duct | 8.96e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.