FFCP PHASE1:Mm9::chr13:49063403..49063437,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=218236|HGNC=|MCL_coexpression_id=2853|UniProt=Q6A0A9|association_with_transcript=-17bp_to_ENSMUST00000060805_5end|description=CAGE_peak_1_at_Fam120a_5end|id=chr13:49063403..49063437,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.61e-18!130;UBERON:0000925!1.61e-18!130;UBERON:0006595!1.61e-18!130;UBERON:0001007!2.10e-17!128;UBERON:0001555!2.10e-17!128;UBERON:0007026!2.10e-17!128;UBERON:0004921!6.97e-17!126;UBERON:0004185!6.97e-17!126;UBERON:0005409!3.86e-13!59;UBERON:0000160!6.86e-11!43;UBERON:0004923!1.87e-09!24;UBERON:0002365!1.12e-08!25;UBERON:0002330!1.12e-08!25;UBERON:0003929!3.35e-08!55;UBERON:0009854!3.55e-08!23;UBERON:0009856!3.55e-08!23;UBERON:0002107!9.68e-08!22;UBERON:0007499!9.68e-08!22;UBERON:0006925!9.68e-08!22;UBERON:0009497!9.68e-08!22;UBERON:0000015!9.68e-08!22;UBERON:0002423!9.68e-08!22;UBERON:0006235!9.68e-08!22;UBERON:0008835!9.68e-08!22;UBERON:0003894!9.68e-08!22;UBERON:0004161!9.68e-08!22;UBERON:0008836!9.68e-08!22;UBERON:0000344!2.02e-07!15;UBERON:0005911!2.94e-07!69;UBERON:0001242!3.37e-07!13;UBERON:0000060!3.37e-07!13;UBERON:0001262!3.37e-07!13;UBERON:0004786!3.37e-07!13;UBERON:0000077!3.57e-07!97;UBERON:0000490!6.19e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.87e-18,118;UBERON:0000925,2.87e-18,118;UBERON:0006595,2.87e-18,118;UBERON:0001007,3.70e-17,116;UBERON:0001555,3.70e-17,116;UBERON:0007026,3.70e-17,116;UBERON:0004921,1.19e-16,114;UBERON:0005409,3.91e-14,47;UBERON:0000160,2.04e-12,31;UBERON:0004923,1.87e-09,24;UBERON:0002365,1.12e-08,25;UBERON:0002330,1.12e-08,25;UBERON:0003929,3.35e-08,55;UBERON:0009854,3.55e-08,23;UBERON:0009856,3.55e-08,23;UBERON:0002107,9.68e-08,22;UBERON:0007499,9.68e-08,22;UBERON:0006925,9.68e-08,22;UBERON:0009497,9.68e-08,22;UBERON:0000015,9.68e-08,22;UBERON:0002423,9.68e-08,22;UBERON:0006235,9.68e-08,22;UBERON:0008835,9.68e-08,22;UBERON:0003894,9.68e-08,22;UBERON:0004161,9.68e-08,22;UBERON:0008836,9.68e-08,22;UBERON:0000344,2.02e-07,15;UBERON:0005911,2.94e-07,69;UBERON:0001242,3.37e-07,13;UBERON:0001262,3.37e-07,13;UBERON:0004786,3.37e-07,13;UBERON:0000490,6.19e-07,66;UBERON:0005256,8.95e-07,45|phase1_expression=19.3780104996801,109.927253406399,117.84480300189,114.633936085289,130.733785515997,85.6184286750638,75.6904955529503,36.9292705042908,45.3339685328367,42.3656792642808,38.8664787871896,46.1083078993044,37.4929598549341,34.00653654099,64.9564035540542,42.1148556170838,55.2653883721236,27.4452083861667,29.7538320924453,26.3121584114779,32.7416667081619,30.0851582138682,21.6795824985316,52.6375070990308,51.3876789590461,106.232913361279,88.3062092126103,72.3983341824587,62.8977518400598,69.056255554221,52.3284005146519,34.9266870402797,38.1340168302433,31.6963362030877,53.1486980342345,46.7119353457364,59.0049439598247,33.0639988282157,23.440060335714,21.4644735029257,21.7645650571475,23.2235464885872,23.3044969454954,41.5459499319405,49.4719424351231,43.3170335101568,57.8969594817549,39.6805784612413,54.7018595008835,38.4971200167081,64.113781104416,56.0635001023389,19.1272170905819,29.0144856804538,28.5679729271094,64.3148590089867,72.2064268645667,59.3022906119059,12.1389876515759,17.9856932952491,10.1413024560989,51.8432134065772,64.029225320002,44.0950861467885,56.3653826663175,58.2593694255802,61.7176227667914,47.6430698598728,22.2932666463227,19.0358373047684,21.0324961351382,20.5668708770739,18.3320888989839,16.5362578940188,14.6643570657902,15.6267193723704,23.1243350098716,22.2175968268227,23.348193054949,12.924856197559,11.618930737506,8.85552729946492,20.1011759280994,20.2594539611405,27.8092810953794,19.7401152267357,19.2201769078789,17.7079473534036,33.0923464866014,36.3499204113638,30.4357713136762,30.9752595713299,63.9173053685286,74.4790404460188,87.0700399379877,81.9889203388124,47.7511028447956,55.7307154830249,29.3558185201242,32.5072408549513,18.7321748302985,17.9657068380045,20.3844191765317,85.3280043783997,28.5768174134803,28.1229450677359,26.2872711407687,54.4657106259916,23.5633474118926,59.9706241821892,36.9523746011869,35.9269264408327,42.8944824896269,35.7212658109715,39.039450769054,58.3092983769694,69.4617859333591,62.0331241186421,51.3074120130927,60.8243355802258,61.8356251689102,45.0933985415757,65.2371164263428,26.9358333250623,28.9036455402568,82.512628832375,19.529865294465,7.19883277192089,18.4251829255944,25.7639899776295,27.4500361691176,12.942398267625,31.9836749153789,35.0330176542553,26.8046577481833,27.418773458451,40.4302274485756,53.49499736234,28.5576717030052,47.1389757185702,19.1277051155174,19.5416788768452,23.0479526150847,21.701493768343,30.7524976164002,27.288222420673,30.1719553082327,43.2034629134156,21.5567992932842,28.1768059450051,29.9116911078713,35.071317188412,34.7559061531997,57.1133553096353,44.2431593277078,24.8792833523116,9.12877143507205,12.0953516343916,21.0280989552739,37.0755132838548,30.9574399175047,32.0510469400606,40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| ||
|EntrezGene=218236 | |||
|HGNC= | |||
|MCL_coexpression_id=2853 | |||
|UniProt=Q6A0A9 | |||
|association_with_transcript=-17bp_to_ENSMUST00000060805_5end | |||
|description=CAGE_peak_1_at_Fam120a_5end | |||
|id=chr13:49063403..49063437,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.61e-18!130;UBERON:0000925!1.61e-18!130;UBERON:0006595!1.61e-18!130;UBERON:0001007!2.10e-17!128;UBERON:0001555!2.10e-17!128;UBERON:0007026!2.10e-17!128;UBERON:0004921!6.97e-17!126;UBERON:0004185!6.97e-17!126;UBERON:0005409!3.86e-13!59;UBERON:0000160!6.86e-11!43;UBERON:0004923!1.87e-09!24;UBERON:0002365!1.12e-08!25;UBERON:0002330!1.12e-08!25;UBERON:0003929!3.35e-08!55;UBERON:0009854!3.55e-08!23;UBERON:0009856!3.55e-08!23;UBERON:0002107!9.68e-08!22;UBERON:0007499!9.68e-08!22;UBERON:0006925!9.68e-08!22;UBERON:0009497!9.68e-08!22;UBERON:0000015!9.68e-08!22;UBERON:0002423!9.68e-08!22;UBERON:0006235!9.68e-08!22;UBERON:0008835!9.68e-08!22;UBERON:0003894!9.68e-08!22;UBERON:0004161!9.68e-08!22;UBERON:0008836!9.68e-08!22;UBERON:0000344!2.02e-07!15;UBERON:0005911!2.94e-07!69;UBERON:0001242!3.37e-07!13;UBERON:0000060!3.37e-07!13;UBERON:0001262!3.37e-07!13;UBERON:0004786!3.37e-07!13;UBERON:0000077!3.57e-07!97;UBERON:0000490!6.19e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.87e-18,118;UBERON:0000925,2.87e-18,118;UBERON:0006595,2.87e-18,118;UBERON:0001007,3.70e-17,116;UBERON:0001555,3.70e-17,116;UBERON:0007026,3.70e-17,116;UBERON:0004921,1.19e-16,114;UBERON:0005409,3.91e-14,47;UBERON:0000160,2.04e-12,31;UBERON:0004923,1.87e-09,24;UBERON:0002365,1.12e-08,25;UBERON:0002330,1.12e-08,25;UBERON:0003929,3.35e-08,55;UBERON:0009854,3.55e-08,23;UBERON:0009856,3.55e-08,23;UBERON:0002107,9.68e-08,22;UBERON:0007499,9.68e-08,22;UBERON:0006925,9.68e-08,22;UBERON:0009497,9.68e-08,22;UBERON:0000015,9.68e-08,22;UBERON:0002423,9.68e-08,22;UBERON:0006235,9.68e-08,22;UBERON:0008835,9.68e-08,22;UBERON:0003894,9.68e-08,22;UBERON:0004161,9.68e-08,22;UBERON:0008836,9.68e-08,22;UBERON:0000344,2.02e-07,15;UBERON:0005911,2.94e-07,69;UBERON:0001242,3.37e-07,13;UBERON:0001262,3.37e-07,13;UBERON:0004786,3.37e-07,13;UBERON:0000490,6.19e-07,66;UBERON:0005256,8.95e-07,45 | |||
|phase1_expression=19.3780104996801,109.927253406399,117.84480300189,114.633936085289,130.733785515997,85.6184286750638,75.6904955529503,36.9292705042908,45.3339685328367,42.3656792642808,38.8664787871896,46.1083078993044,37.4929598549341,34.00653654099,64.9564035540542,42.1148556170838,55.2653883721236,27.4452083861667,29.7538320924453,26.3121584114779,32.7416667081619,30.0851582138682,21.6795824985316,52.6375070990308,51.3876789590461,106.232913361279,88.3062092126103,72.3983341824587,62.8977518400598,69.056255554221,52.3284005146519,34.9266870402797,38.1340168302433,31.6963362030877,53.1486980342345,46.7119353457364,59.0049439598247,33.0639988282157,23.440060335714,21.4644735029257,21.7645650571475,23.2235464885872,23.3044969454954,41.5459499319405,49.4719424351231,43.3170335101568,57.8969594817549,39.6805784612413,54.7018595008835,38.4971200167081,64.113781104416,56.0635001023389,19.1272170905819,29.0144856804538,28.5679729271094,64.3148590089867,72.2064268645667,59.3022906119059,12.1389876515759,17.9856932952491,10.1413024560989,51.8432134065772,64.029225320002,44.0950861467885,56.3653826663175,58.2593694255802,61.7176227667914,47.6430698598728,22.2932666463227,19.0358373047684,21.0324961351382,20.5668708770739,18.3320888989839,16.5362578940188,14.6643570657902,15.6267193723704,23.1243350098716,22.2175968268227,23.348193054949,12.924856197559,11.618930737506,8.85552729946492,20.1011759280994,20.2594539611405,27.8092810953794,19.7401152267357,19.2201769078789,17.7079473534036,33.0923464866014,36.3499204113638,30.4357713136762,30.9752595713299,63.9173053685286,74.4790404460188,87.0700399379877,81.9889203388124,47.7511028447956,55.7307154830249,29.3558185201242,32.5072408549513,18.7321748302985,17.9657068380045,20.3844191765317,85.3280043783997,28.5768174134803,28.1229450677359,26.2872711407687,54.4657106259916,23.5633474118926,59.9706241821892,36.9523746011869,35.9269264408327,42.8944824896269,35.7212658109715,39.039450769054,58.3092983769694,69.4617859333591,62.0331241186421,51.3074120130927,60.8243355802258,61.8356251689102,45.0933985415757,65.2371164263428,26.9358333250623,28.9036455402568,82.512628832375,19.529865294465,7.19883277192089,18.4251829255944,25.7639899776295,27.4500361691176,12.942398267625,31.9836749153789,35.0330176542553,26.8046577481833,27.418773458451,40.4302274485756,53.49499736234,28.5576717030052,47.1389757185702,19.1277051155174,19.5416788768452,23.0479526150847,21.701493768343,30.7524976164002,27.288222420673,30.1719553082327,43.2034629134156,21.5567992932842,28.1768059450051,29.9116911078713,35.071317188412,34.7559061531997,57.1133553096353,44.2431593277078,24.8792833523116,9.12877143507205,12.0953516343916,21.0280989552739,37.0755132838548,30.9574399175047,32.0510469400606,40.9568392562414,31.2855128478372,31.9332923676873,31.6246164860555,42.9237442239391,35.0296027101508,39.1652442794083,34.1468325284518,50.6680059661598,50.0003956994637,54.2288784768895,43.0802604220793,37.2213208958505,19.3460671273055,91.8564216694958,96.2600062655301,25.3813018136928,30.6552406855779,54.8975385232118,65.7488290272097,65.6015229342367,70.1932560355343,93.0076960627243,60.279817428988,50.5183769688542,55.1109427553988,53.8100880448772,77.2984691442631,77.3774218551405,87.2238776854128,31.4848715582116,32.6750746063824,36.0664754153857,33.3988177666315,32.7779703313288,38.4344292998946,45.1508875067197,48.7113488332687,55.5775496558467,53.9245606338268,64.6266727049985,71.7433954579204,68.7956482896211,81.8498089080868,73.435363942638,79.1061083987927,52.1982996151911,54.3745699782032,45.5599987237849,48.0482473079143,231.466812509041,58.7982697316235,55.8547434875063,65.9230871441962,64.7624662814103,58.3756660849674,42.8627401186523,28.6132031773432,35.6893298408037,31.2330957826346,35.4382274915638,46.0642207964993,43.8000299230265,59.5157625966286,39.2511508824416,36.3202091023991,53.5768022689157,37.0331091257568,44.8980952851329,43.9733138087795,28.6503439484617,45.6880774407716,87.0422763243694,66.5007558594405,24.4036896781444,26.1382061100613,50.1640932852627,59.8356097474364,32.8128548192907,41.3865068954437,41.5767157624302,34.4115069051675,42.1089494015725,51.5199286035675,39.6714487641396,40.331308391761,36.3664755710802,35.9879874392424,56.6340939980992,40.0647608251324,40.3959659196869,48.8311563998705,51.7706039525855,29.6192376109077,38.6974152914881,45.4538242211714,38.3892460745005,50.726799410748,49.101375701962,37.4439741361831,32.0847640546249,53.4102120911529,42.1674434299995,55.6931933540209,46.640225988269,23.7680644121329,27.424040961944,27.4351404840438,31.9212420556092,48.8730560229673,35.2134904088539,26.4884505729701,79.3190373255341,74.7767210149285,45.2083216012672,41.551335741253,46.0173616083331,58.443224255383,51.0913632333424,60.7321329056727,70.246881627794,26.5158181875029,54.3369400937172,36.9432493654168,44.2614920413611,47.4688511651821,69.9874445931649,63.3715539782068,22.7771096191766,21.9723780148143,24.461395363383,57.2802370809068,32.74077533564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| |||
|short_description=p1@Fam120a | |||
}} |
Revision as of 00:40, 13 September 2013
Short description: | p1@Fam120a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam120a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2853 |
Association with transcript: | -17bp_to_ENSMUST00000060805_5end |
EntrezGene: | Fam120a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.87e-18 | 118 |
endoderm | 2.87e-18 | 118 |
presumptive endoderm | 2.87e-18 | 118 |
digestive system | 3.70e-17 | 116 |
digestive tract | 3.70e-17 | 116 |
primitive gut | 3.70e-17 | 116 |
subdivision of digestive tract | 1.19e-16 | 114 |
gastrointestinal system | 3.91e-14 | 47 |
intestine | 2.04e-12 | 31 |
organ component layer | 1.87e-09 | 24 |
exocrine gland | 1.12e-08 | 25 |
exocrine system | 1.12e-08 | 25 |
gut epithelium | 3.35e-08 | 55 |
digestive tract diverticulum | 3.55e-08 | 23 |
sac | 3.55e-08 | 23 |
liver | 9.68e-08 | 22 |
epithelial sac | 9.68e-08 | 22 |
digestive gland | 9.68e-08 | 22 |
epithelium of foregut-midgut junction | 9.68e-08 | 22 |
anatomical boundary | 9.68e-08 | 22 |
hepatobiliary system | 9.68e-08 | 22 |
foregut-midgut junction | 9.68e-08 | 22 |
hepatic diverticulum | 9.68e-08 | 22 |
liver primordium | 9.68e-08 | 22 |
septum transversum | 9.68e-08 | 22 |
liver bud | 9.68e-08 | 22 |
mucosa | 2.02e-07 | 15 |
endo-epithelium | 2.94e-07 | 69 |
intestinal mucosa | 3.37e-07 | 13 |
wall of intestine | 3.37e-07 | 13 |
gastrointestinal system mucosa | 3.37e-07 | 13 |
unilaminar epithelium | 6.19e-07 | 66 |
trunk mesenchyme | 8.95e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.