FFCP PHASE1:Mm9::chr14:31735163..31735178,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=62|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:31735163..31735178,-|id=chr14:31735163..31735178,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,3.02e-18,5;CL:0000057,7.19e-11,1;CL:0000632,7.19e-11,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.71e-24!22;UBERON:0007499!5.71e-24!22;UBERON:0006925!5.71e-24!22;UBERON:0009497!5.71e-24!22;UBERON:0000015!5.71e-24!22;UBERON:0002423!5.71e-24!22;UBERON:0006235!5.71e-24!22;UBERON:0008835!5.71e-24!22;UBERON:0003894!5.71e-24!22;UBERON:0004161!5.71e-24!22;UBERON:0008836!5.71e-24!22;UBERON:0009854!8.67e-23!23;UBERON:0009856!8.67e-23!23;UBERON:0002365!1.04e-20!25;UBERON:0002330!1.04e-20!25;UBERON:0005256!1.20e-12!47;UBERON:0005172!1.68e-10!49;UBERON:0005173!1.68e-10!49;UBERON:0002417!1.68e-10!49;UBERON:0000916!1.68e-10!49;UBERON:0003914!1.55e-09!47;UBERON:0005057!1.51e-08!51;UBERON:0002368!5.74e-08!60;UBERON:0003929!1.05e-07!55;UBERON:0002530!4.19e-07!65;UBERON:0009569!6.01e-07!66;UBERON:0000490!7.25e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.75e-35,22;UBERON:0007499,1.75e-35,22;UBERON:0006925,1.75e-35,22;UBERON:0009497,1.75e-35,22;UBERON:0000015,1.75e-35,22;UBERON:0002423,1.75e-35,22;UBERON:0006235,1.75e-35,22;UBERON:0008835,1.75e-35,22;UBERON:0003894,1.75e-35,22;UBERON:0004161,1.75e-35,22;UBERON:0008836,1.75e-35,22;UBERON:0009854,6.12e-34,23;UBERON:0009856,6.12e-34,23;UBERON:0002365,3.19e-31,25;UBERON:0002330,3.19e-31,25;UBERON:0005256,2.69e-17,45;UBERON:0003914,1.49e-16,47;UBERON:0005172,7.21e-16,49;UBERON:0005173,7.21e-16,49;UBERON:0002417,7.21e-16,49;UBERON:0000916,7.21e-16,49;UBERON:0003929,4.10e-14,55;UBERON:0002368,6.45e-13,60;UBERON:0003104,1.06e-12,61;UBERON:0009142,1.06e-12,61;UBERON:0002530,6.66e-12,65;UBERON:0000490,1.02e-11,66;UBERON:0009569,1.02e-11,66;UBERON:0005911,3.39e-11,69;UBERON:0000949,1.02e-10,72;UBERON:0005177,9.73e-10,79;UBERON:0001041,1.30e-09,80;UBERON:0002100,1.67e-08,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,2.719885334831,0,2.59910566979068,1.79210754838934,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01850340712568,0.575392274901621,13.2950885955529,1.37280706594041,7.18841032636773,2.60498663367952,0.312037673114561,0.252578877947112,0.538192240565737,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr14:31735163..31735178,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=62 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:31735163..31735178,- | |||
|id=chr14:31735163..31735178,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.02e-18,5;CL:0000057,7.19e-11,1;CL:0000632,7.19e-11,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.71e-24!22;UBERON:0007499!5.71e-24!22;UBERON:0006925!5.71e-24!22;UBERON:0009497!5.71e-24!22;UBERON:0000015!5.71e-24!22;UBERON:0002423!5.71e-24!22;UBERON:0006235!5.71e-24!22;UBERON:0008835!5.71e-24!22;UBERON:0003894!5.71e-24!22;UBERON:0004161!5.71e-24!22;UBERON:0008836!5.71e-24!22;UBERON:0009854!8.67e-23!23;UBERON:0009856!8.67e-23!23;UBERON:0002365!1.04e-20!25;UBERON:0002330!1.04e-20!25;UBERON:0005256!1.20e-12!47;UBERON:0005172!1.68e-10!49;UBERON:0005173!1.68e-10!49;UBERON:0002417!1.68e-10!49;UBERON:0000916!1.68e-10!49;UBERON:0003914!1.55e-09!47;UBERON:0005057!1.51e-08!51;UBERON:0002368!5.74e-08!60;UBERON:0003929!1.05e-07!55;UBERON:0002530!4.19e-07!65;UBERON:0009569!6.01e-07!66;UBERON:0000490!7.25e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.75e-35,22;UBERON:0007499,1.75e-35,22;UBERON:0006925,1.75e-35,22;UBERON:0009497,1.75e-35,22;UBERON:0000015,1.75e-35,22;UBERON:0002423,1.75e-35,22;UBERON:0006235,1.75e-35,22;UBERON:0008835,1.75e-35,22;UBERON:0003894,1.75e-35,22;UBERON:0004161,1.75e-35,22;UBERON:0008836,1.75e-35,22;UBERON:0009854,6.12e-34,23;UBERON:0009856,6.12e-34,23;UBERON:0002365,3.19e-31,25;UBERON:0002330,3.19e-31,25;UBERON:0005256,2.69e-17,45;UBERON:0003914,1.49e-16,47;UBERON:0005172,7.21e-16,49;UBERON:0005173,7.21e-16,49;UBERON:0002417,7.21e-16,49;UBERON:0000916,7.21e-16,49;UBERON:0003929,4.10e-14,55;UBERON:0002368,6.45e-13,60;UBERON:0003104,1.06e-12,61;UBERON:0009142,1.06e-12,61;UBERON:0002530,6.66e-12,65;UBERON:0000490,1.02e-11,66;UBERON:0009569,1.02e-11,66;UBERON:0005911,3.39e-11,69;UBERON:0000949,1.02e-10,72;UBERON:0005177,9.73e-10,79;UBERON:0001041,1.30e-09,80;UBERON:0002100,1.67e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,2.719885334831,0,2.59910566979068,1.79210754838934,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01850340712568,0.575392274901621,13.2950885955529,1.37280706594041,7.18841032636773,2.60498663367952,0.312037673114561,0.252578877947112,0.538192240565737,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr14:31735163..31735178,- | |||
}} |
Revision as of 01:57, 13 September 2013
Short description: | p@chr14:31735163..31735178, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:31735163..31735178, - |
Coexpression cluster: | MCL_coexpression_mm9:62 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.02e-18 | 5 |
fibroblast | 7.19e-11 | 1 |
hepatic stellate cell | 7.19e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.75e-35 | 22 |
epithelial sac | 1.75e-35 | 22 |
digestive gland | 1.75e-35 | 22 |
epithelium of foregut-midgut junction | 1.75e-35 | 22 |
anatomical boundary | 1.75e-35 | 22 |
hepatobiliary system | 1.75e-35 | 22 |
foregut-midgut junction | 1.75e-35 | 22 |
hepatic diverticulum | 1.75e-35 | 22 |
liver primordium | 1.75e-35 | 22 |
septum transversum | 1.75e-35 | 22 |
liver bud | 1.75e-35 | 22 |
digestive tract diverticulum | 6.12e-34 | 23 |
sac | 6.12e-34 | 23 |
exocrine gland | 3.19e-31 | 25 |
exocrine system | 3.19e-31 | 25 |
trunk mesenchyme | 2.69e-17 | 45 |
epithelial tube | 1.49e-16 | 47 |
abdomen element | 7.21e-16 | 49 |
abdominal segment element | 7.21e-16 | 49 |
abdominal segment of trunk | 7.21e-16 | 49 |
abdomen | 7.21e-16 | 49 |
gut epithelium | 4.10e-14 | 55 |
endocrine gland | 6.45e-13 | 60 |
mesenchyme | 1.06e-12 | 61 |
entire embryonic mesenchyme | 1.06e-12 | 61 |
gland | 6.66e-12 | 65 |
unilaminar epithelium | 1.02e-11 | 66 |
subdivision of trunk | 1.02e-11 | 66 |
endo-epithelium | 3.39e-11 | 69 |
endocrine system | 1.02e-10 | 72 |
trunk region element | 9.73e-10 | 79 |
foregut | 1.30e-09 | 80 |
trunk | 1.67e-08 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.