FFCP PHASE1:Hg19::chr4:184908962..184908984,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=131bp_to_ENST00000505025_5end|description=CAGE_peak_2_at_ENST00000505025_5end|id=chr4:184908962..184908984,+|ontology_enrichment_celltype=CL:0002076!2.01e-12!43;CL:0002251!1.68e-10!21;CL:0000223!3.52e-10!59|ontology_enrichment_celltype_v019=CL:0002568;2.28e-10;1!CL:1000306;2.28e-10;4!CL:0002547;2.28e-10;4|ontology_enrichment_celltype_v019_2=CL:0002568,2.08e-10,1;CL:1000306,2.39e-10,4;CL:0002547,2.39e-10,4|ontology_enrichment_development_v019=UBERON:0000358;8.93e-11;1|ontology_enrichment_disease=DOID:1749!3.20e-07!14|ontology_enrichment_disease_v019=DOID:1749;2.50e-16;14!DOID:3151;2.28e-10;1!DOID:3149;2.28e-10;1!DOID:4362;3.78e-08;5|ontology_enrichment_disease_v019_2=DOID:1749,2.28e-16,14;DOID:3151,4.33e-10,1;DOID:3149,4.33e-10,1;DOID:4362,3.16e-08,5|ontology_enrichment_uberon=UBERON:0000161!4.17e-08!35;UBERON:0000344!5.41e-08!12|ontology_enrichment_uberon_v019=UBERON:0003343;1.81e-10;4!UBERON:0004785;1.81e-10;4!UBERON:0004797;2.28e-10;4!UBERON:0000415;2.28e-10;4!UBERON:0007240;2.28e-10;4!UBERON:0005742;2.28e-10;4!UBERON:0005734;2.28e-10;4!UBERON:0004664;2.28e-10;4!UBERON:0004663;2.28e-10;4!UBERON:0000974;2.95e-07;6!UBERON:0000002;6.28e-07;6!UBERON:0001560;6.28e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.81e-10,4;UBERON:0004785,1.81e-10,4;UBERON:0000415,2.39e-10,4;UBERON:0007240,2.39e-10,4;UBERON:0005742,2.39e-10,4;UBERON:0005734,2.39e-10,4;UBERON:0004664,2.39e-10,4;UBERON:0004663,2.39e-10,4;UBERON:0000002,5.42e-07,6;UBERON:0001560,5.42e-07,6|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.25326102332916,2.25095607382472,2.0078563452417,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.201504196455281,0.169560592310488,0.57978255948989,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,1.1240175325762,0.201057944823262,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.34385702559088,0.708875486211932,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,1.29271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0.904318131178758,0,1.3996218765488,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0.153461973288062,0.280660094433074,1.02511319404561,0.511707249066704,0,0,0,0,0,0,0,0,1.00253235151642,0.0920809889358963,0.34444334449382,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0.826424576804891,0.576570202095319,1.02090169995667,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.707027159768564,0,0,0,0,0,0,0,0,0,0.286822704408103,0.294747123039363,0.7133421029625,0,0.211107635297664,0,0,0,0.288666338176536,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0.10893846351899,1.53366118706464,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.782658475728359,0.242780379534093,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,1.21882889212564,0.17472666824203,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0.372757606696298,0.942776138467182,0,0,0.305994652908965,1.15580235960608,0,0,0,0.429765441419957,0,0,0.458320848023367,0,0.199679000498991,0,0,0.53746777989381,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0.77380195455795,0.182248669974074,1.0063040627978,0,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372578417648301,0,0.499921631848426,0,0,0.235265819698172,0,0,0,0,0,0.568209015825267,0.251567901752575,0.889811221596536,0.686520205190771,0.151230923763239,0,0.44356544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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=131bp_to_ENST00000505025_5end | |||
|description=CAGE_peak_2_at_ENST00000505025_5end | |||
|id=chr4:184908962..184908984,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.01e-12!43;CL:0002251!1.68e-10!21;CL:0000223!3.52e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0002568;2.28e-10;1!CL:1000306;2.28e-10;4!CL:0002547;2.28e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,2.08e-10,1;CL:1000306,2.39e-10,4;CL:0002547,2.39e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.93e-11;1 | |||
|ontology_enrichment_disease=DOID:1749!3.20e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.50e-16;14!DOID:3151;2.28e-10;1!DOID:3149;2.28e-10;1!DOID:4362;3.78e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.28e-16,14;DOID:3151,4.33e-10,1;DOID:3149,4.33e-10,1;DOID:4362,3.16e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000161!4.17e-08!35;UBERON:0000344!5.41e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.81e-10;4!UBERON:0004785;1.81e-10;4!UBERON:0004797;2.28e-10;4!UBERON:0000415;2.28e-10;4!UBERON:0007240;2.28e-10;4!UBERON:0005742;2.28e-10;4!UBERON:0005734;2.28e-10;4!UBERON:0004664;2.28e-10;4!UBERON:0004663;2.28e-10;4!UBERON:0000974;2.95e-07;6!UBERON:0000002;6.28e-07;6!UBERON:0001560;6.28e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.81e-10,4;UBERON:0004785,1.81e-10,4;UBERON:0000415,2.39e-10,4;UBERON:0007240,2.39e-10,4;UBERON:0005742,2.39e-10,4;UBERON:0005734,2.39e-10,4;UBERON:0004664,2.39e-10,4;UBERON:0004663,2.39e-10,4;UBERON:0000002,5.42e-07,6;UBERON:0001560,5.42e-07,6 | |||
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|short_description=p2@ENST00000505025 | |||
}} |
Revision as of 10:12, 13 September 2013
Short description: | p2@ENST00000505025 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000505025_5end |
Coexpression cluster: | NA |
Association with transcript: | 131bp_to_ENST00000505025_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 2.08e-10 | 1 |
fibroblast of tunica adventitia of artery | 2.39e-10 | 4 |
fibroblast of the aortic adventitia | 2.39e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.81e-10 | 4 |
respiratory system mucosa | 1.81e-10 | 4 |
artery wall | 2.39e-10 | 4 |
tunica adventitia of artery | 2.39e-10 | 4 |
adventitia | 2.39e-10 | 4 |
tunica adventitia of blood vessel | 2.39e-10 | 4 |
aorta tunica adventitia | 2.39e-10 | 4 |
aorta wall | 2.39e-10 | 4 |
uterine cervix | 5.42e-07 | 6 |
neck of organ | 5.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.28e-16 | 14 |
skin squamous cell carcinoma | 4.33e-10 | 1 |
keratoacanthoma | 4.33e-10 | 1 |
cervical cancer | 3.16e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.