FFCP PHASE1:Mm9::chr16:75593146..75593173,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=224344|HGNC=|MCL_coexpression_id=9|UniProt=Q80YT9,Q8BYK1|association_with_transcript=10bp_to_ENSMUST00000114253,NM_198302,uc007zro.1_5end|description=CAGE_peak_1_at_Rbm11_5end|id=chr16:75593146..75593173,+|ontology_enrichment_celltype=CL:0000221!8.24e-10!44;CL:0000133!8.24e-10!44;CL:0002319!1.05e-09!43;CL:0000540!1.32e-08!33;CL:0000047!1.32e-08!33;CL:0000031!1.32e-08!33;CL:0000404!1.32e-08!33;CL:0000117!3.53e-08!23;CL:0000337!3.53e-08!23;CL:0000055!7.48e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.42e-10,23;CL:0000337,4.42e-10,23;CL:0000540,1.52e-07,33;CL:0000047,1.52e-07,33;CL:0000031,1.52e-07,33;CL:0000404,1.52e-07,33;CL:0002319,1.57e-07,43;CL:0000221,3.41e-07,44;CL:0000133,3.41e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.06e-27!73;UBERON:0005743!3.06e-27!73;UBERON:0000073!6.85e-27!75;UBERON:0001016!6.85e-27!75;UBERON:0002346!2.85e-26!71;UBERON:0003075!2.85e-26!71;UBERON:0007284!2.85e-26!71;UBERON:0004121!6.52e-26!102;UBERON:0000924!6.52e-26!102;UBERON:0006601!6.52e-26!102;UBERON:0000033!4.20e-23!63;UBERON:0001049!3.17e-22!52;UBERON:0005068!3.17e-22!52;UBERON:0006241!3.17e-22!52;UBERON:0007135!3.17e-22!52;UBERON:0000955!3.00e-21!50;UBERON:0006238!3.00e-21!50;UBERON:0002616!1.17e-20!49;UBERON:0003056!1.08e-18!49;UBERON:0003080!2.75e-16!40;UBERON:0002780!1.32e-15!39;UBERON:0001890!1.32e-15!39;UBERON:0006240!1.32e-15!39;UBERON:0002020!7.02e-14!34;UBERON:0007811!4.82e-12!86;UBERON:0002791!2.26e-11!29;UBERON:0003528!2.26e-11!29;UBERON:0001893!2.26e-11!29;UBERON:0000153!8.26e-10!94;UBERON:0002619!1.50e-07!17;UBERON:0000956!1.66e-07!21;UBERON:0001869!1.66e-07!21;UBERON:0000203!1.66e-07!21;UBERON:0002021!2.97e-07!10;UBERON:0000411!2.97e-07!10;UBERON:0001950!2.97e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.14e-31,54;UBERON:0001017,1.79e-31,73;UBERON:0002346,6.95e-31,64;UBERON:0003075,6.95e-31,64;UBERON:0007284,6.95e-31,64;UBERON:0001016,4.33e-30,75;UBERON:0001049,7.92e-30,52;UBERON:0005068,7.92e-30,52;UBERON:0006241,7.92e-30,52;UBERON:0007135,7.92e-30,52;UBERON:0004121,1.42e-27,95;UBERON:0000924,1.42e-27,95;UBERON:0006601,1.42e-27,95;UBERON:0010371,6.24e-26,73;UBERON:0000955,1.60e-25,47;UBERON:0006238,1.60e-25,47;UBERON:0003056,4.77e-25,49;UBERON:0002616,1.17e-24,46;UBERON:0003080,8.22e-22,40;UBERON:0002780,8.54e-21,39;UBERON:0001890,8.54e-21,39;UBERON:0006240,8.54e-21,39;UBERON:0010314,1.10e-19,92;UBERON:0002020,1.43e-18,34;UBERON:0003528,8.32e-15,29;UBERON:0002791,8.32e-15,29;UBERON:0001893,8.32e-15,29;UBERON:0002619,1.26e-10,17;UBERON:0002021,2.70e-10,10;UBERON:0000411,2.70e-10,10;UBERON:0001950,2.70e-10,10;UBERON:0000956,4.47e-09,21;UBERON:0001869,4.47e-09,21;UBERON:0000203,4.47e-09,21;UBERON:0003076,2.21e-08,12;UBERON:0003057,2.21e-08,12;UBERON:0000025,4.25e-08,114;UBERON:0004111,4.79e-08,122;UBERON:0002420,2.26e-07,8;UBERON:0007245,2.26e-07,8;UBERON:0010009,2.26e-07,8;UBERON:0010011,2.26e-07,8;UBERON:0000454,2.26e-07,8;UBERON:0003135,4.00e-07,15;UBERON:0001894,5.54e-07,10;UBERON:0006222,5.54e-07,10|phase1_expression=1.60148847104794,0,0,0,0,0,0,0.645616617207881,0,0.234064526321993,0,0.0797721589953364,0,0.174840804837995,0,0,0,0.473193248037357,0.411343300817216,0.42438965179803,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0,0,0.101376931219515,0.183546752161682,0.782391344348039,1.09012578190223,1.97717564461025,1.1665793944457,1.81982348112971,1.43752564364972,0,0.725362142011344,0,0,0.573066879877513,0,2.22548106945558,3.70293685490423,1.90149421051854,0,0.889294796111139,0,0.988866362566974,0,0.599200221036809,0.384218305321555,0.414758449233911,0.945041568321835,0.210324961351382,4.57041575046086,4.19650227808066,1.10241719293459,0.575072826109418,0,4.40463523997555,6.12899222808901,6.29786786350598,2.63772575460388,4.94033275453012,2.08365348222704,6.70039197603314,4.50210088025344,7.02871939773326,3.53554302568401,2.56269025438385,3.35519002485541,0.151452386666368,0.982430281388212,0,0,0,0,0,0,1.12355536105401,0,0,0,0.845060518660083,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,1.25602267690966,0,2.22663208597237,0.346970653532272,0.913396434936424,0.922461989024234,0.753613202763113,1.99900802130698,1.88499886994513,0,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,2.04946557908083,3.35114730901528,0,0.11981512450592,0,0.889491589511453,7.33974133083631,4.11750542536764,1.38219787324151,5.73620256634512,6.39288643325826,7.06479351502504,5.84068547043927,3.1570202793598,28.6136032403214,158.457169537914,0.420883711772948,1.04096354370163,1.37941262660084,1.26043490863744,1.65775299619287,2.10913147369116,1.66547836370305,1.21812241927647,2.32833033665114,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0,0,0,0.995171334092466,0,1.02939162845886,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0,0,0,0,0.467061369468678,0.329119699826961,0,0,0,0.219550115291051,0.134206418760372,9.88362758251398,1.74937841044784,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.605050573870028,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,1.39269530428806,0.779856348476481,0,0.216138049874694,0.597423819763102,0.189667900953082,0.456994050438915,0,0.814605311381257,0.969762435838129,1.19230893813542,0.505892296994058,0.442830443938806,0.31399745568275,1.60416313098341,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0,0.390267295715598,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,0,1.08781136763742,0,0,7.70642831941401,6.21221938938677,0,0,0.631016438832513,0.780877488593277,0.646270193198397,1.43381278771531,0.668396022247182,0.283076530788832,0.404810701674894,0.876767573733936,1.18586333383957,4.4984984299053,0.141940085208269,0.712262414669021,3.25773918707152,2.3095817216155,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,9.19186935535228,0.36012218806262,1.4229455216103,1.71469628025274,3.54680467284547,2.49716344642899,4.60737257685939,2.43571959291679,0,0,0.882113592219848,0.16488625294148,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,7.23158677840988,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0,1.5298058699447,1.53946597556024,3.17859939750175,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.436725127492355,0.944050424693745,0.165306911450672,0.785267825952089,0.259229946583586,0,13.5286305284206,0.747582730219894,0,1.55560950675238,1.54991788173277,1.35164900392623,1.76035857968631,1.17183946359555,2.83120229949419,8.45544422891021,5.18454011264158,0.316011120628178,1.01362607645082,0.513554785824136,0.51968329191118,0.179026695667481,0.198681354781265,0,0,0,0.15241361331,0.100826185136841,0,0,0,0.453460767230423,0.221985953374065,0,0,1.15913756419314,0.187682475451182,0.73260649706906,1.2862102744744,0.501572104035363,4.51801474093653,5.06357760157895,4.58316410751517,3.78077001156113,6.85082519770642,4.5323633843382,4.05013500139084,6.30449684513909,8.60970577069989,7.24864436452548,0.207574695168353,0.798049746802062,1.19513524027894,0.243106717068294,0.628839487883947,0.735374033800057,0.666740183404846,0.618105171716683,0.962757628775446,0.505394423527595,1.2673964994512,0.565879024158229,0.37456602987953,1.02440243847791,0.861532034334199,0,0.695305955669133,1.15745532278223,0.412085900803307,0.147198920134397,1.02860775715625,1.06485483695602,0.953744759789284,0.726732083161643,0.470546902076653,0.507687647350059,0.548783918618318,0.526139422875686,1.08643291076689,1.12228454331548,0.830445126869219,0.886540341380071,0.818462086339379,0.619747364743864,0.771626443924566,1.49886346762768,0.935726433781634,0.214871054048298,2.10417165275728,0.882365676478062,1.15933917810211|short_description=p1@Rbm11}} | ||
|EntrezGene=224344 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|UniProt=Q80YT9,Q8BYK1 | |||
|association_with_transcript=10bp_to_ENSMUST00000114253,NM_198302,uc007zro.1_5end | |||
|description=CAGE_peak_1_at_Rbm11_5end | |||
|id=chr16:75593146..75593173,+ | |||
|ontology_enrichment_celltype=CL:0000221!8.24e-10!44;CL:0000133!8.24e-10!44;CL:0002319!1.05e-09!43;CL:0000540!1.32e-08!33;CL:0000047!1.32e-08!33;CL:0000031!1.32e-08!33;CL:0000404!1.32e-08!33;CL:0000117!3.53e-08!23;CL:0000337!3.53e-08!23;CL:0000055!7.48e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.42e-10,23;CL:0000337,4.42e-10,23;CL:0000540,1.52e-07,33;CL:0000047,1.52e-07,33;CL:0000031,1.52e-07,33;CL:0000404,1.52e-07,33;CL:0002319,1.57e-07,43;CL:0000221,3.41e-07,44;CL:0000133,3.41e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.06e-27!73;UBERON:0005743!3.06e-27!73;UBERON:0000073!6.85e-27!75;UBERON:0001016!6.85e-27!75;UBERON:0002346!2.85e-26!71;UBERON:0003075!2.85e-26!71;UBERON:0007284!2.85e-26!71;UBERON:0004121!6.52e-26!102;UBERON:0000924!6.52e-26!102;UBERON:0006601!6.52e-26!102;UBERON:0000033!4.20e-23!63;UBERON:0001049!3.17e-22!52;UBERON:0005068!3.17e-22!52;UBERON:0006241!3.17e-22!52;UBERON:0007135!3.17e-22!52;UBERON:0000955!3.00e-21!50;UBERON:0006238!3.00e-21!50;UBERON:0002616!1.17e-20!49;UBERON:0003056!1.08e-18!49;UBERON:0003080!2.75e-16!40;UBERON:0002780!1.32e-15!39;UBERON:0001890!1.32e-15!39;UBERON:0006240!1.32e-15!39;UBERON:0002020!7.02e-14!34;UBERON:0007811!4.82e-12!86;UBERON:0002791!2.26e-11!29;UBERON:0003528!2.26e-11!29;UBERON:0001893!2.26e-11!29;UBERON:0000153!8.26e-10!94;UBERON:0002619!1.50e-07!17;UBERON:0000956!1.66e-07!21;UBERON:0001869!1.66e-07!21;UBERON:0000203!1.66e-07!21;UBERON:0002021!2.97e-07!10;UBERON:0000411!2.97e-07!10;UBERON:0001950!2.97e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.14e-31,54;UBERON:0001017,1.79e-31,73;UBERON:0002346,6.95e-31,64;UBERON:0003075,6.95e-31,64;UBERON:0007284,6.95e-31,64;UBERON:0001016,4.33e-30,75;UBERON:0001049,7.92e-30,52;UBERON:0005068,7.92e-30,52;UBERON:0006241,7.92e-30,52;UBERON:0007135,7.92e-30,52;UBERON:0004121,1.42e-27,95;UBERON:0000924,1.42e-27,95;UBERON:0006601,1.42e-27,95;UBERON:0010371,6.24e-26,73;UBERON:0000955,1.60e-25,47;UBERON:0006238,1.60e-25,47;UBERON:0003056,4.77e-25,49;UBERON:0002616,1.17e-24,46;UBERON:0003080,8.22e-22,40;UBERON:0002780,8.54e-21,39;UBERON:0001890,8.54e-21,39;UBERON:0006240,8.54e-21,39;UBERON:0010314,1.10e-19,92;UBERON:0002020,1.43e-18,34;UBERON:0003528,8.32e-15,29;UBERON:0002791,8.32e-15,29;UBERON:0001893,8.32e-15,29;UBERON:0002619,1.26e-10,17;UBERON:0002021,2.70e-10,10;UBERON:0000411,2.70e-10,10;UBERON:0001950,2.70e-10,10;UBERON:0000956,4.47e-09,21;UBERON:0001869,4.47e-09,21;UBERON:0000203,4.47e-09,21;UBERON:0003076,2.21e-08,12;UBERON:0003057,2.21e-08,12;UBERON:0000025,4.25e-08,114;UBERON:0004111,4.79e-08,122;UBERON:0002420,2.26e-07,8;UBERON:0007245,2.26e-07,8;UBERON:0010009,2.26e-07,8;UBERON:0010011,2.26e-07,8;UBERON:0000454,2.26e-07,8;UBERON:0003135,4.00e-07,15;UBERON:0001894,5.54e-07,10;UBERON:0006222,5.54e-07,10 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0.645616617207881,0,0.234064526321993,0,0.0797721589953364,0,0.174840804837995,0,0,0,0.473193248037357,0.411343300817216,0.42438965179803,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0,0,0.101376931219515,0.183546752161682,0.782391344348039,1.09012578190223,1.97717564461025,1.1665793944457,1.81982348112971,1.43752564364972,0,0.725362142011344,0,0,0.573066879877513,0,2.22548106945558,3.70293685490423,1.90149421051854,0,0.889294796111139,0,0.988866362566974,0,0.599200221036809,0.384218305321555,0.414758449233911,0.945041568321835,0.210324961351382,4.57041575046086,4.19650227808066,1.10241719293459,0.575072826109418,0,4.40463523997555,6.12899222808901,6.29786786350598,2.63772575460388,4.94033275453012,2.08365348222704,6.70039197603314,4.50210088025344,7.02871939773326,3.53554302568401,2.56269025438385,3.35519002485541,0.151452386666368,0.982430281388212,0,0,0,0,0,0,1.12355536105401,0,0,0,0.845060518660083,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,1.25602267690966,0,2.22663208597237,0.346970653532272,0.913396434936424,0.922461989024234,0.753613202763113,1.99900802130698,1.88499886994513,0,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,2.04946557908083,3.35114730901528,0,0.11981512450592,0,0.889491589511453,7.33974133083631,4.11750542536764,1.38219787324151,5.73620256634512,6.39288643325826,7.06479351502504,5.84068547043927,3.1570202793598,28.6136032403214,158.457169537914,0.420883711772948,1.04096354370163,1.37941262660084,1.26043490863744,1.65775299619287,2.10913147369116,1.66547836370305,1.21812241927647,2.32833033665114,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0,0,0,0.995171334092466,0,1.02939162845886,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0,0,0,0,0.467061369468678,0.329119699826961,0,0,0,0.219550115291051,0.134206418760372,9.88362758251398,1.74937841044784,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.605050573870028,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,1.39269530428806,0.779856348476481,0,0.216138049874694,0.597423819763102,0.189667900953082,0.456994050438915,0,0.814605311381257,0.969762435838129,1.19230893813542,0.505892296994058,0.442830443938806,0.31399745568275,1.60416313098341,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0,0.390267295715598,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,0,1.08781136763742,0,0,7.70642831941401,6.21221938938677,0,0,0.631016438832513,0.780877488593277,0.646270193198397,1.43381278771531,0.668396022247182,0.283076530788832,0.404810701674894,0.876767573733936,1.18586333383957,4.4984984299053,0.141940085208269,0.712262414669021,3.25773918707152,2.3095817216155,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,9.19186935535228,0.36012218806262,1.4229455216103,1.71469628025274,3.54680467284547,2.49716344642899,4.60737257685939,2.43571959291679,0,0,0.882113592219848,0.16488625294148,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,7.23158677840988,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0,1.5298058699447,1.53946597556024,3.17859939750175,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.436725127492355,0.944050424693745,0.165306911450672,0.785267825952089,0.259229946583586,0,13.5286305284206,0.747582730219894,0,1.55560950675238,1.54991788173277,1.35164900392623,1.76035857968631,1.17183946359555,2.83120229949419,8.45544422891021,5.18454011264158,0.316011120628178,1.01362607645082,0.513554785824136,0.51968329191118,0.179026695667481,0.198681354781265,0,0,0,0.15241361331,0.100826185136841,0,0,0,0.453460767230423,0.221985953374065,0,0,1.15913756419314,0.187682475451182,0.73260649706906,1.2862102744744,0.501572104035363,4.51801474093653,5.06357760157895,4.58316410751517,3.78077001156113,6.85082519770642,4.5323633843382,4.05013500139084,6.30449684513909,8.60970577069989,7.24864436452548,0.207574695168353,0.798049746802062,1.19513524027894,0.243106717068294,0.628839487883947,0.735374033800057,0.666740183404846,0.618105171716683,0.962757628775446,0.505394423527595,1.2673964994512,0.565879024158229,0.37456602987953,1.02440243847791,0.861532034334199,0,0.695305955669133,1.15745532278223,0.412085900803307,0.147198920134397,1.02860775715625,1.06485483695602,0.953744759789284,0.726732083161643,0.470546902076653,0.507687647350059,0.548783918618318,0.526139422875686,1.08643291076689,1.12228454331548,0.830445126869219,0.886540341380071,0.818462086339379,0.619747364743864,0.771626443924566,1.49886346762768,0.935726433781634,0.214871054048298,2.10417165275728,0.882365676478062,1.15933917810211 | |||
|short_description=p1@Rbm11 | |||
}} |
Revision as of 13:07, 13 September 2013
Short description: | p1@Rbm11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rbm11_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 10bp_to_ENSMUST00000114253, NM_198302, uc007zro.1_5end |
EntrezGene: | Rbm11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.42e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.42e-10 | 23 |
neuron | 1.52e-07 | 33 |
neuronal stem cell | 1.52e-07 | 33 |
neuroblast | 1.52e-07 | 33 |
electrically signaling cell | 1.52e-07 | 33 |
neural cell | 1.57e-07 | 43 |
ectodermal cell | 3.41e-07 | 44 |
neurectodermal cell | 3.41e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.