FFCP PHASE1:Hg19::chr5:169694248..169694285,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3937|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6529|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc011des.1_5end|description=CAGE_peak_6_at_LCP2_5end|id=chr5:169694248..169694285,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.63e-14;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.87e-69!115;UBERON:0001049!1.58e-37!57;UBERON:0005068!1.58e-37!57;UBERON:0006241!1.58e-37!57;UBERON:0007135!1.58e-37!57;UBERON:0002616!1.30e-29!59;UBERON:0002780!1.92e-29!41;UBERON:0001890!1.92e-29!41;UBERON:0006240!1.92e-29!41;UBERON:0002020!2.05e-29!34;UBERON:0003528!2.05e-29!34;UBERON:0001893!2.32e-29!34;UBERON:0003075!1.10e-28!86;UBERON:0007284!1.10e-28!86;UBERON:0003080!1.59e-28!42;UBERON:0002791!9.24e-28!33;UBERON:0002346!8.72e-27!90;UBERON:0001869!1.44e-26!32;UBERON:0001017!3.12e-26!82;UBERON:0002619!9.79e-26!22;UBERON:0005743!1.18e-25!86;UBERON:0000955!6.87e-25!69;UBERON:0006238!6.87e-25!69;UBERON:0001950!7.25e-23!20;UBERON:0000956!5.10e-22!25;UBERON:0000203!5.10e-22!25;UBERON:0000073!5.39e-22!94;UBERON:0001016!5.39e-22!94;UBERON:0003056!2.50e-19!61;UBERON:0000153!2.57e-13!129;UBERON:0007811!2.57e-13!129;UBERON:0000033!4.92e-13!123;UBERON:0000200!5.18e-12!6;UBERON:0002298!1.29e-10!8;UBERON:0003076!5.55e-10!15;UBERON:0003057!5.55e-10!15;UBERON:0004121!6.40e-10!169;UBERON:0000924!2.06e-09!173;UBERON:0006601!2.06e-09!173;UBERON:0000349!5.66e-09!5;UBERON:0002308!8.53e-09!9;UBERON:0000125!8.53e-09!9;UBERON:0002420!1.78e-08!9;UBERON:0007245!1.78e-08!9;UBERON:0010009!1.78e-08!9;UBERON:0010011!1.78e-08!9;UBERON:0000454!1.78e-08!9;UBERON:0001871!3.87e-08!7;UBERON:0000025!7.64e-07!194;UBERON:0002771!9.69e-07!3;UBERON:0001872!9.73e-07!5;UBERON:0004111!9.82e-07!241|ontology_enrichment_uberon_v019=UBERON:0002619;5.09e-44;22!UBERON:0001950;9.69e-43;20!UBERON:0001893;4.03e-42;34!UBERON:0003528;1.91e-39;34!UBERON:0002020;1.91e-39;34!UBERON:0000956;1.73e-38;25!UBERON:0000203;1.73e-38;25!UBERON:0001869;2.42e-37;32!UBERON:0002791;4.06e-36;32!UBERON:0002780;2.59e-35;41!UBERON:0001890;2.59e-35;41!UBERON:0000073;5.04e-32;53!UBERON:0002616;5.04e-32;53!UBERON:0000200;3.34e-26;6!UBERON:0001017;2.55e-19;75!UBERON:0000955;6.97e-18;68!UBERON:0002298;6.19e-17;6!UBERON:0001016;6.06e-16;83!UBERON:0001872;2.00e-14;5!UBERON:0001870;4.40e-14;3!UBERON:0002021;1.75e-13;5!UBERON:0007023;2.02e-13;114!UBERON:0000988;3.04e-13;3!UBERON:0000125;3.31e-11;9!UBERON:0002308;3.31e-11;9!UBERON:0002702;4.27e-10;2!UBERON:0002771;1.26e-09;2!UBERON:0002148;2.14e-09;2!UBERON:0006331;2.14e-09;2!UBERON:0009662;2.14e-09;2!UBERON:0004733;2.47e-08;12!UBERON:0002028;2.47e-08;12!UBERON:0004732;1.14e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.90e-63,56;UBERON:0005068,3.90e-63,56;UBERON:0006241,3.90e-63,56;UBERON:0007135,3.90e-63,56;UBERON:0000073,4.85e-58,53;UBERON:0002616,4.85e-58,53;UBERON:0002780,1.32e-51,41;UBERON:0001890,1.32e-51,41;UBERON:0003080,1.32e-51,41;UBERON:0006240,1.32e-51,41;UBERON:0007023,1.35e-49,114;UBERON:0003528,1.92e-48,34;UBERON:0002020,1.92e-48,34;UBERON:0001893,2.46e-48,34;UBERON:0001017,3.41e-47,81;UBERON:0000955,1.33e-46,68;UBERON:0006238,1.33e-46,68;UBERON:0002619,4.05e-44,22;UBERON:0001950,7.33e-43,20;UBERON:0001869,2.77e-42,32;UBERON:0002791,5.94e-42,32;UBERON:0001016,8.12e-42,89;UBERON:0003075,4.92e-41,82;UBERON:0007284,4.92e-41,82;UBERON:0002346,8.31e-39,86;UBERON:0000956,1.42e-38,25;UBERON:0000203,1.42e-38,25;UBERON:0003056,4.92e-33,61;UBERON:0010371,6.95e-31,104;UBERON:0000200,3.01e-26,6;UBERON:0010314,1.29e-24,132;UBERON:0004121,1.82e-18,171;UBERON:0000924,1.82e-18,171;UBERON:0006601,1.82e-18,171;UBERON:0011216,5.80e-17,223;UBERON:0002298,6.52e-17,6;UBERON:0001872,2.22e-14,5;UBERON:0001870,4.04e-14,3;UBERON:0002021,1.54e-13,5;UBERON:0000025,1.77e-13,192;UBERON:0000988,3.11e-13,3;UBERON:0004111,3.33e-13,240;UBERON:0003076,1.29e-12,15;UBERON:0003057,1.29e-12,15;UBERON:0000125,2.93e-11,9;UBERON:0002308,2.93e-11,9;UBERON:0002702,4.18e-10,2;UBERON:0002771,1.18e-09,2;UBERON:0002148,1.97e-09,2;UBERON:0006331,1.97e-09,2;UBERON:0009662,1.97e-09,2;UBERON:0004733,2.53e-08,12;UBERON:0002028,2.53e-08,12;UBERON:0007277,2.53e-08,12;UBERON:0004732,1.16e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0.962787081228281,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.334231370655521,0,0,0.270803863765016,0,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0.506039384039006,0,0,0,0,0.127986611154418,1.24930726552346,0,0,0,0,0.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6529 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc011des.1_5end | |||
|description=CAGE_peak_6_at_LCP2_5end | |||
|id=chr5:169694248..169694285,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.63e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.87e-69!115;UBERON:0001049!1.58e-37!57;UBERON:0005068!1.58e-37!57;UBERON:0006241!1.58e-37!57;UBERON:0007135!1.58e-37!57;UBERON:0002616!1.30e-29!59;UBERON:0002780!1.92e-29!41;UBERON:0001890!1.92e-29!41;UBERON:0006240!1.92e-29!41;UBERON:0002020!2.05e-29!34;UBERON:0003528!2.05e-29!34;UBERON:0001893!2.32e-29!34;UBERON:0003075!1.10e-28!86;UBERON:0007284!1.10e-28!86;UBERON:0003080!1.59e-28!42;UBERON:0002791!9.24e-28!33;UBERON:0002346!8.72e-27!90;UBERON:0001869!1.44e-26!32;UBERON:0001017!3.12e-26!82;UBERON:0002619!9.79e-26!22;UBERON:0005743!1.18e-25!86;UBERON:0000955!6.87e-25!69;UBERON:0006238!6.87e-25!69;UBERON:0001950!7.25e-23!20;UBERON:0000956!5.10e-22!25;UBERON:0000203!5.10e-22!25;UBERON:0000073!5.39e-22!94;UBERON:0001016!5.39e-22!94;UBERON:0003056!2.50e-19!61;UBERON:0000153!2.57e-13!129;UBERON:0007811!2.57e-13!129;UBERON:0000033!4.92e-13!123;UBERON:0000200!5.18e-12!6;UBERON:0002298!1.29e-10!8;UBERON:0003076!5.55e-10!15;UBERON:0003057!5.55e-10!15;UBERON:0004121!6.40e-10!169;UBERON:0000924!2.06e-09!173;UBERON:0006601!2.06e-09!173;UBERON:0000349!5.66e-09!5;UBERON:0002308!8.53e-09!9;UBERON:0000125!8.53e-09!9;UBERON:0002420!1.78e-08!9;UBERON:0007245!1.78e-08!9;UBERON:0010009!1.78e-08!9;UBERON:0010011!1.78e-08!9;UBERON:0000454!1.78e-08!9;UBERON:0001871!3.87e-08!7;UBERON:0000025!7.64e-07!194;UBERON:0002771!9.69e-07!3;UBERON:0001872!9.73e-07!5;UBERON:0004111!9.82e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.09e-44;22!UBERON:0001950;9.69e-43;20!UBERON:0001893;4.03e-42;34!UBERON:0003528;1.91e-39;34!UBERON:0002020;1.91e-39;34!UBERON:0000956;1.73e-38;25!UBERON:0000203;1.73e-38;25!UBERON:0001869;2.42e-37;32!UBERON:0002791;4.06e-36;32!UBERON:0002780;2.59e-35;41!UBERON:0001890;2.59e-35;41!UBERON:0000073;5.04e-32;53!UBERON:0002616;5.04e-32;53!UBERON:0000200;3.34e-26;6!UBERON:0001017;2.55e-19;75!UBERON:0000955;6.97e-18;68!UBERON:0002298;6.19e-17;6!UBERON:0001016;6.06e-16;83!UBERON:0001872;2.00e-14;5!UBERON:0001870;4.40e-14;3!UBERON:0002021;1.75e-13;5!UBERON:0007023;2.02e-13;114!UBERON:0000988;3.04e-13;3!UBERON:0000125;3.31e-11;9!UBERON:0002308;3.31e-11;9!UBERON:0002702;4.27e-10;2!UBERON:0002771;1.26e-09;2!UBERON:0002148;2.14e-09;2!UBERON:0006331;2.14e-09;2!UBERON:0009662;2.14e-09;2!UBERON:0004733;2.47e-08;12!UBERON:0002028;2.47e-08;12!UBERON:0004732;1.14e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.90e-63,56;UBERON:0005068,3.90e-63,56;UBERON:0006241,3.90e-63,56;UBERON:0007135,3.90e-63,56;UBERON:0000073,4.85e-58,53;UBERON:0002616,4.85e-58,53;UBERON:0002780,1.32e-51,41;UBERON:0001890,1.32e-51,41;UBERON:0003080,1.32e-51,41;UBERON:0006240,1.32e-51,41;UBERON:0007023,1.35e-49,114;UBERON:0003528,1.92e-48,34;UBERON:0002020,1.92e-48,34;UBERON:0001893,2.46e-48,34;UBERON:0001017,3.41e-47,81;UBERON:0000955,1.33e-46,68;UBERON:0006238,1.33e-46,68;UBERON:0002619,4.05e-44,22;UBERON:0001950,7.33e-43,20;UBERON:0001869,2.77e-42,32;UBERON:0002791,5.94e-42,32;UBERON:0001016,8.12e-42,89;UBERON:0003075,4.92e-41,82;UBERON:0007284,4.92e-41,82;UBERON:0002346,8.31e-39,86;UBERON:0000956,1.42e-38,25;UBERON:0000203,1.42e-38,25;UBERON:0003056,4.92e-33,61;UBERON:0010371,6.95e-31,104;UBERON:0000200,3.01e-26,6;UBERON:0010314,1.29e-24,132;UBERON:0004121,1.82e-18,171;UBERON:0000924,1.82e-18,171;UBERON:0006601,1.82e-18,171;UBERON:0011216,5.80e-17,223;UBERON:0002298,6.52e-17,6;UBERON:0001872,2.22e-14,5;UBERON:0001870,4.04e-14,3;UBERON:0002021,1.54e-13,5;UBERON:0000025,1.77e-13,192;UBERON:0000988,3.11e-13,3;UBERON:0004111,3.33e-13,240;UBERON:0003076,1.29e-12,15;UBERON:0003057,1.29e-12,15;UBERON:0000125,2.93e-11,9;UBERON:0002308,2.93e-11,9;UBERON:0002702,4.18e-10,2;UBERON:0002771,1.18e-09,2;UBERON:0002148,1.97e-09,2;UBERON:0006331,1.97e-09,2;UBERON:0009662,1.97e-09,2;UBERON:0004733,2.53e-08,12;UBERON:0002028,2.53e-08,12;UBERON:0007277,2.53e-08,12;UBERON:0004732,1.16e-07,13 | |||
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|short_description=p6@LCP2 | |||
}} |
Revision as of 14:43, 13 September 2013
Short description: | p6@LCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LCP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc011des.1_5end |
EntrezGene: | LCP2 |
HGNC: | 6529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.