FFCP PHASE1:Mm9::chr17:56749098..56749109,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=224904|HGNC=|MCL_coexpression_id=2220|UniProt=Q8R404|association_with_transcript=84bp_to_ENSMUST00000052832,NM_153152,uc008dcl.1,uc008dcm.1_5end|description=CAGE_peak_2_at_2410015M20Rik_5end|id=chr17:56749098..56749109,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!8.50e-09!47;UBERON:0004535!3.13e-07!23;UBERON:0001009!3.13e-07!23;UBERON:0003103!5.26e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0003914,8.50e-09,47;UBERON:0004535,3.13e-07,23;UBERON:0001009,3.13e-07,23;UBERON:0003103,5.26e-07,43|phase1_expression=8.96833543786846,10.1202868215415,8.64498554840118,5.44435580352294,4.00716583957078,8.72972213941827,9.57811826441655,3.74457637980571,10.6999428835267,11.7032263160997,5.65019295144166,3.19088635981346,4.45121897821135,4.02133851127388,4.33042690360362,3.44207954562704,6.29605690315332,2.68142840554502,2.05671650408608,5.94145512517242,9.43980520676875,12.2127869977089,15.6719873483361,11.5194544411253,13.3057383018959,19.5238867799107,15.9381938578858,14.6520438226405,12.1614988452079,13.1055667475164,15.0776747245607,12.7006134691926,7.99584223859941,0,13.8648777480612,18.4520456347927,15.9252097884648,7.11503772252743,6.2506827561904,7.32933241563318,4.70585190424811,6.83045484958446,5.34061388334269,15.485308610996,13.1790010585369,14.3166466686112,34.4252191513137,23.1106665763273,23.9457939180574,23.9148775861369,11.4788865732797,20.125359011096,4.02678254538567,3.62681071005672,4.7053131879945,5.65970759279083,7.73640287834643,14.4388185837684,4.45096213891115,7.93486468908049,7.60597684207415,16.9422266034566,10.6715375533337,19.3478439215501,9.88866362566974,26.2877642530057,23.668408730954,34.9638657842615,2.07379224616955,4.86021377994086,4.6271491497304,11.4260393761521,14.1355866209033,3.30725157880376,3.83381884072945,4.5960939330501,7.70811166995721,8.55505165170758,12.4421291937557,4.3522474950964,7.13603620098795,7.8137005583514,16.7509799400829,14.6318278608237,14.9742282821274,9.1334861496837,8.82704420954438,6.89677949553612,6.96680978665293,4.83657984683427,5.50742528533188,56.7879758807715,29.918738683141,56.129131930333,68.8763002494529,57.7954684355563,14.1848864333069,4.26075806445144,7.53379413348319,10.2468476607999,8.30976176682415,5.13305909657271,0,7.11066703153331,9.30911476348221,6.08063677140237,10.1104889002957,17.127581957859,2.33044095282455,11.2816025689267,9.54169297213747,11.8741536541735,14.2981608298756,20.0461111934988,11.6412820064348,16.4623234641875,9.39340877390621,21.8345028949067,1.76922110389975,7.92657564742305,5.52103796150984,5.33362778448744,9.31958806090611,4.39171195517321,3.56059401582874,6.64188343542338,13.7787393181808,20.3966928537759,10.9280395282836,6.5907881338122,8.23501085073528,3.01570445070875,5.21472960576829,9.2057564638919,9.14267396062064,7.46309810111685,3.66621709861139,8.21086006026614,34.1175723885461,7.78634866779954,6.76626303406059,5.51765050640335,3.96136685571768,6.0281927134286,3.53789795586905,3.97152532883034,4.49768277886698,5.17406741478031,2.15567992932842,3.02569728268511,3.69497360744293,5.2606975782618,3.61461423993277,4.87553033131033,6.58502836505419,5.57295947091781,14.0442637462647,16.9849618695712,13.924011470384,8.28503090142008,9.85009451920604,13.8647787324981,10.4167683657493,11.0187969778546,18.5120535464854,15.8123082430277,19.047411499373,17.3980360127083,23.5320585376277,24.132617219627,21.1589592914683,28.2165975730891,28.1024147572545,22.6808847705028,8.20130799400096,4.93942139420565,6.93879444265976,9.25576983322405,4.69234151177515,3.94802342162745,3.73715637834071,6.05050573870028,6.67134131534611,7.98947629672748,7.59246498471219,8.72904460037258,6.78605063760728,7.56034593756373,5.06906626509712,5.39291645192533,9.29393614461185,7.96565093017469,7.77638393907635,6.96915926919346,6.76246414038483,9.16430975303914,9.11576689687841,9.8190147846446,13.7855650930881,19.6321496812871,30.3007544733853,31.5896739639809,31.7204310983249,3.50374722003798,2.94838492669805,4.27238013531222,3.04290182082754,3.85883455603867,8.40265310878685,8.34318798607351,11.6737363278025,21.4157902286704,5.75072826109418,12.2806512730606,16.5379966750717,16.9227848224565,22.0658818631952,28.946611281802,2.95605104266567,5.49525094134406,2.11854469374634,5.43184274480602,3.75504397261603,3.01511263395268,1.6663054862021,2.73187107000918,4.09851374676097,2.87904096543407,3.18909537314974,4.91589944147214,4.14443956478149,2.31438493730419,10.5553898757491,4.35124547054968,10.8188140064188,9.3818493743609,9.31193421929193,8.90808818100744,9.18035694109382,13.8859009962405,6.31016438832513,7.02789739733949,6.03185513651837,6.69112634267146,5.79276552614225,3.11384183867716,5.66734982344852,6.72188473196017,4.34816555741176,6.74774764485795,9.22610553853746,8.01295216502649,3.90928702448583,4.45419332025846,5.30980553359851,8.01176099311439,6.04647113929502,10.1846743068185,9.15435867930396,5.84126781093462,5.16856586336442,6.5436071305951,7.12994756769443,7.26884543252377,3.16255825724996,4.12542172992747,7.83011093233712,8.28281032544027,11.1248468053169,12.4315480318324,10.995094485821,11.7723419617367,8.72109809191241,9.74287837166718,4.92810586933792,15.2519091021951,19.4064990288366,2.80306630000516,4.52100394748536,4.34253059482722,5.84924485615369,2.62625439592098,9.61886760878507,7.97328798645192,3.2465467351592,2.88941615148511,4.07427960213366,0.941842285023455,4.64760374251486,4.11800711771741,8.66889992968662,5.17820373597535,5.8043988997858,28.6401185404534,3.16335993581135,3.04979200690273,6.15630442684267,6.690825472463,11.7915784422936,9.44050424693745,9.00922667406162,21.7257431846745,12.5726524093039,9.94142900939081,4.50954350947352,7.62534384824292,8.76929999422617,4.86127970860119,7.23295011475294,5.74450826668646,5.8678619322877,5.07797100891405,4.8235298435827,4.34851417486811,4.60848010012585,2.52808896502543,7.9062833963164,7.29247795870273,6.10627867995637,3.22248052201467,3.17890167650024,3.24527713703916,2.80610101631697,2.82706059854813,2.057583779685,2.01652370273681,2.0466154955348,2.50150788264857,1.63627663054197,9.52267611183888,8.43546622821446,6.2799699626633,6.2117308054709,10.4322380777383,6.94425159169373,4.94509385521616,4.71610433973945,7.02200945649509,11.8597886949584,10.5874804396651,17.1868654031819,15.4667864109319,10.2762377965596,8.3093328712867,10.8003600037089,9.90706647093285,9.9691329976525,7.24864436452548,4.25528125095124,3.19219898720825,6.31714341290296,3.8897074730927,5.24032906569956,8.08911437180062,10.2233494788743,6.79915688888351,10.5903339165299,9.8551912587881,10.3926512954998,8.29955902098735,10.4878488366268,7.87509374579892,7.8112237779634,9.52587382566147,8.57544011991931,7.5234595980845,9.06588981767275,11.0399190100798,11.6575545811041,8.34136288948886,11.4449371174714,9.01147783120437,9.12860990028707,9.39222147597609,8.23175877927476,13.6796249947678,8.69146328613515,8.97827634652382,8.42308628681636,7.38783617816726,11.0492381655816,7.2820315357404,9.06661071611365,4.49659040288303,11.462648813825,6.01638951335235,13.1988949127502,8.16188250742207,17.1582198359112|short_description=p2@2410015M20Rik}} | ||
|EntrezGene=224904 | |||
|HGNC= | |||
|MCL_coexpression_id=2220 | |||
|UniProt=Q8R404 | |||
|association_with_transcript=84bp_to_ENSMUST00000052832,NM_153152,uc008dcl.1,uc008dcm.1_5end | |||
|description=CAGE_peak_2_at_2410015M20Rik_5end | |||
|id=chr17:56749098..56749109,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!8.50e-09!47;UBERON:0004535!3.13e-07!23;UBERON:0001009!3.13e-07!23;UBERON:0003103!5.26e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,8.50e-09,47;UBERON:0004535,3.13e-07,23;UBERON:0001009,3.13e-07,23;UBERON:0003103,5.26e-07,43 | |||
|phase1_expression=8.96833543786846,10.1202868215415,8.64498554840118,5.44435580352294,4.00716583957078,8.72972213941827,9.57811826441655,3.74457637980571,10.6999428835267,11.7032263160997,5.65019295144166,3.19088635981346,4.45121897821135,4.02133851127388,4.33042690360362,3.44207954562704,6.29605690315332,2.68142840554502,2.05671650408608,5.94145512517242,9.43980520676875,12.2127869977089,15.6719873483361,11.5194544411253,13.3057383018959,19.5238867799107,15.9381938578858,14.6520438226405,12.1614988452079,13.1055667475164,15.0776747245607,12.7006134691926,7.99584223859941,0,13.8648777480612,18.4520456347927,15.9252097884648,7.11503772252743,6.2506827561904,7.32933241563318,4.70585190424811,6.83045484958446,5.34061388334269,15.485308610996,13.1790010585369,14.3166466686112,34.4252191513137,23.1106665763273,23.9457939180574,23.9148775861369,11.4788865732797,20.125359011096,4.02678254538567,3.62681071005672,4.7053131879945,5.65970759279083,7.73640287834643,14.4388185837684,4.45096213891115,7.93486468908049,7.60597684207415,16.9422266034566,10.6715375533337,19.3478439215501,9.88866362566974,26.2877642530057,23.668408730954,34.9638657842615,2.07379224616955,4.86021377994086,4.6271491497304,11.4260393761521,14.1355866209033,3.30725157880376,3.83381884072945,4.5960939330501,7.70811166995721,8.55505165170758,12.4421291937557,4.3522474950964,7.13603620098795,7.8137005583514,16.7509799400829,14.6318278608237,14.9742282821274,9.1334861496837,8.82704420954438,6.89677949553612,6.96680978665293,4.83657984683427,5.50742528533188,56.7879758807715,29.918738683141,56.129131930333,68.8763002494529,57.7954684355563,14.1848864333069,4.26075806445144,7.53379413348319,10.2468476607999,8.30976176682415,5.13305909657271,0,7.11066703153331,9.30911476348221,6.08063677140237,10.1104889002957,17.127581957859,2.33044095282455,11.2816025689267,9.54169297213747,11.8741536541735,14.2981608298756,20.0461111934988,11.6412820064348,16.4623234641875,9.39340877390621,21.8345028949067,1.76922110389975,7.92657564742305,5.52103796150984,5.33362778448744,9.31958806090611,4.39171195517321,3.56059401582874,6.64188343542338,13.7787393181808,20.3966928537759,10.9280395282836,6.5907881338122,8.23501085073528,3.01570445070875,5.21472960576829,9.2057564638919,9.14267396062064,7.46309810111685,3.66621709861139,8.21086006026614,34.1175723885461,7.78634866779954,6.76626303406059,5.51765050640335,3.96136685571768,6.0281927134286,3.53789795586905,3.97152532883034,4.49768277886698,5.17406741478031,2.15567992932842,3.02569728268511,3.69497360744293,5.2606975782618,3.61461423993277,4.87553033131033,6.58502836505419,5.57295947091781,14.0442637462647,16.9849618695712,13.924011470384,8.28503090142008,9.85009451920604,13.8647787324981,10.4167683657493,11.0187969778546,18.5120535464854,15.8123082430277,19.047411499373,17.3980360127083,23.5320585376277,24.132617219627,21.1589592914683,28.2165975730891,28.1024147572545,22.6808847705028,8.20130799400096,4.93942139420565,6.93879444265976,9.25576983322405,4.69234151177515,3.94802342162745,3.73715637834071,6.05050573870028,6.67134131534611,7.98947629672748,7.59246498471219,8.72904460037258,6.78605063760728,7.56034593756373,5.06906626509712,5.39291645192533,9.29393614461185,7.96565093017469,7.77638393907635,6.96915926919346,6.76246414038483,9.16430975303914,9.11576689687841,9.8190147846446,13.7855650930881,19.6321496812871,30.3007544733853,31.5896739639809,31.7204310983249,3.50374722003798,2.94838492669805,4.27238013531222,3.04290182082754,3.85883455603867,8.40265310878685,8.34318798607351,11.6737363278025,21.4157902286704,5.75072826109418,12.2806512730606,16.5379966750717,16.9227848224565,22.0658818631952,28.946611281802,2.95605104266567,5.49525094134406,2.11854469374634,5.43184274480602,3.75504397261603,3.01511263395268,1.6663054862021,2.73187107000918,4.09851374676097,2.87904096543407,3.18909537314974,4.91589944147214,4.14443956478149,2.31438493730419,10.5553898757491,4.35124547054968,10.8188140064188,9.3818493743609,9.31193421929193,8.90808818100744,9.18035694109382,13.8859009962405,6.31016438832513,7.02789739733949,6.03185513651837,6.69112634267146,5.79276552614225,3.11384183867716,5.66734982344852,6.72188473196017,4.34816555741176,6.74774764485795,9.22610553853746,8.01295216502649,3.90928702448583,4.45419332025846,5.30980553359851,8.01176099311439,6.04647113929502,10.1846743068185,9.15435867930396,5.84126781093462,5.16856586336442,6.5436071305951,7.12994756769443,7.26884543252377,3.16255825724996,4.12542172992747,7.83011093233712,8.28281032544027,11.1248468053169,12.4315480318324,10.995094485821,11.7723419617367,8.72109809191241,9.74287837166718,4.92810586933792,15.2519091021951,19.4064990288366,2.80306630000516,4.52100394748536,4.34253059482722,5.84924485615369,2.62625439592098,9.61886760878507,7.97328798645192,3.2465467351592,2.88941615148511,4.07427960213366,0.941842285023455,4.64760374251486,4.11800711771741,8.66889992968662,5.17820373597535,5.8043988997858,28.6401185404534,3.16335993581135,3.04979200690273,6.15630442684267,6.690825472463,11.7915784422936,9.44050424693745,9.00922667406162,21.7257431846745,12.5726524093039,9.94142900939081,4.50954350947352,7.62534384824292,8.76929999422617,4.86127970860119,7.23295011475294,5.74450826668646,5.8678619322877,5.07797100891405,4.8235298435827,4.34851417486811,4.60848010012585,2.52808896502543,7.9062833963164,7.29247795870273,6.10627867995637,3.22248052201467,3.17890167650024,3.24527713703916,2.80610101631697,2.82706059854813,2.057583779685,2.01652370273681,2.0466154955348,2.50150788264857,1.63627663054197,9.52267611183888,8.43546622821446,6.2799699626633,6.2117308054709,10.4322380777383,6.94425159169373,4.94509385521616,4.71610433973945,7.02200945649509,11.8597886949584,10.5874804396651,17.1868654031819,15.4667864109319,10.2762377965596,8.3093328712867,10.8003600037089,9.90706647093285,9.9691329976525,7.24864436452548,4.25528125095124,3.19219898720825,6.31714341290296,3.8897074730927,5.24032906569956,8.08911437180062,10.2233494788743,6.79915688888351,10.5903339165299,9.8551912587881,10.3926512954998,8.29955902098735,10.4878488366268,7.87509374579892,7.8112237779634,9.52587382566147,8.57544011991931,7.5234595980845,9.06588981767275,11.0399190100798,11.6575545811041,8.34136288948886,11.4449371174714,9.01147783120437,9.12860990028707,9.39222147597609,8.23175877927476,13.6796249947678,8.69146328613515,8.97827634652382,8.42308628681636,7.38783617816726,11.0492381655816,7.2820315357404,9.06661071611365,4.49659040288303,11.462648813825,6.01638951335235,13.1988949127502,8.16188250742207,17.1582198359112 | |||
|short_description=p2@2410015M20Rik | |||
}} | |||
Revision as of 14:59, 13 September 2013
| Short description: | p2@2410015M20Rik |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_2410015M20Rik_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2220 |
| Association with transcript: | 84bp_to_ENSMUST00000052832, NM_153152, uc008dcl.1, uc008dcm.1_5end |
| EntrezGene: | 2410015M20Rik |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial tube | 8.50e-09 | 47 |
| cardiovascular system | 3.13e-07 | 23 |
| circulatory system | 3.13e-07 | 23 |
| compound organ | 5.26e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
